RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 C9orf129Q5T035 196 aaKnown RBP2.04□□□□□ -2.08
CDKL5-208ENST00000624953 TMEM244Q5VVB8 128 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 ZNF57Q68EA5 555 aaPredicted RBP2.04□□□□□ -2.08
CDKL5-208ENST00000624953 PVRIGQ6DKI7 326 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 ZNF880Q6PDB4 577 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 CLEC19AQ6UXS0 136 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 IDO2Q6ZQW0 420 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 SLC16A13Q7RTY0 426 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 GPHB5Q86YW7 130 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 DEFB107AQ8IZN7 70 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 FAM24BQ8N5W8 94 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 CCDC54Q8NEL0 328 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 OR10H4Q8NGA5 316 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 OR11H2Q8NH07 326 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 OR5B3Q8NH48 314 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 CD300LFQ8TDQ1 290 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 GPX8Q8TED1 209 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 MITD1Q8WV92 249 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 CANT1Q8WVQ1 401 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 ASB9Q96DX5 294 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 MRPS24Q96EL2 167 aaKnown RBP2.04□□□□□ -2.08
CDKL5-208ENST00000624953 USMG5Q96IX5 58 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 RARRES2Q99969 163 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 NRN1Q9NPD7 142 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 COA4Q9NYJ1 87 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 GNG8Q9UK08 70 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 JPT1Q9UK76 154 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 KLK9Q9UKQ9 250 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 TRAPPC2LQ9UL33 140 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 WASHC3Q9Y3C0 194 aa2.04□□□□□ -2.08
CDKL5-208ENST00000624953 IGHV3OR16-8A0A075B7F1 116 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 FAM223BA6NKX1 122 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 ZNF705EA8MWA4 302 aaPredicted RBP2.03□□□□□ -2.08
CDKL5-208ENST00000624953 C11orf94C9JXX5 98 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 H7C2Y5 167 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 RAB29O14966 203 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 SLC22A1O15245 554 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 GGCTO75223 188 aaKnown RBP2.03□□□□□ -2.08
CDKL5-208ENST00000624953 OR2J3O76001 311 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 IFNA4P05014 189 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 HTR1AP08908 422 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 SNRPCP09234 159 aaKnown RBP2.03□□□□□ -2.08
CDKL5-208ENST00000624953 ANXA3P12429 323 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 IGFBP3P17936 291 aaPredicted RBP2.03□□□□□ -2.08
CDKL5-208ENST00000624953 GTF2A1P52655 376 aaPredicted RBP2.03□□□□□ -2.08
CDKL5-208ENST00000624953 RPS11P62280 158 aaKnown RBP eCLIP2.03□□□□□ -2.08
CDKL5-208ENST00000624953 RSU1Q15404 277 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 MPV17LQ2QL34 196 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 C6orf183Q5T699 404 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 Q5VSD8 79 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 PRSS48Q7RTY5 328 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 SPATA12Q7Z6I5 190 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 LINC00596Q86U02 117 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 FAM223AQ8IWN6 122 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 SELENOHQ8IZQ5 122 aaKnown RBP2.03□□□□□ -2.08
CDKL5-208ENST00000624953 LINC00518Q8N0U6 118 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 LYPD1Q8N2G4 141 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 TTC9CQ8N5M4 171 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 OR52E5Q8NH55 327 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 SRSF12Q8WXF0 261 aaKnown RBP2.03□□□□□ -2.08
CDKL5-208ENST00000624953 CMTM5Q96DZ9 223 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 GALNT14Q96FL9 552 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 C18orf15Q96N68 181 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 RNF5Q99942 180 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 SULT4A1Q9BR01 284 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 HDHD3Q9BSH5 251 aaPredicted RBP2.03□□□□□ -2.08
CDKL5-208ENST00000624953 RNF126Q9BV68 326 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 MFFQ9GZY8 342 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 BANF2Q9H503 90 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 IMPAD1Q9NX62 359 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 WARS2Q9UGM6 360 aaKnown RBP2.03□□□□□ -2.08
CDKL5-208ENST00000624953 ZNF221Q9UK13 617 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 ING4Q9UNL4 249 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 ERGIC3Q9Y282 383 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 RBMX2Q9Y388 322 aaKnown RBP2.03□□□□□ -2.08
CDKL5-208ENST00000624953 GMPPBQ9Y5P6 360 aa2.03□□□□□ -2.08
CDKL5-208ENST00000624953 DEFB131BA0A096LNP1 70 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 TRAV10A0A0B4J240 114 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 MCRIP1C9JLW8 97 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 J3QLW9 94 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 ITGB1BP1O14713 200 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 RBBP9O75884 186 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 NAPSAO96009 420 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 LALBAP00709 142 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 MBP02144 154 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 CTSDP07339 412 aaPredicted RBP2.02□□□□□ -2.09
CDKL5-208ENST00000624953 SCTP09683 121 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 CD3GP09693 182 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 SAA1P0DJI8 122 aaPredicted RBP2.02□□□□□ -2.09
CDKL5-208ENST00000624953 P0DMU3 169 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 FAM231AP0DMU4 169 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 FAM231CP0DMU5 169 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 MGMTP16455 207 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 RAB3AP20336 220 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 CD40LGP29965 261 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 ZNF93P35789 620 aaPredicted RBP2.02□□□□□ -2.09
CDKL5-208ENST00000624953 LGALS7P47929 136 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 GNGT1P63211 74 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 ATP5G2Q06055 141 aa2.02□□□□□ -2.09
CDKL5-208ENST00000624953 MED21Q13503 144 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms