RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 ZNF429Q86V71 674 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 ZGRF1Q86YA3 2104 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 PUSL1Q8N0Z8 303 aaKnown RBP3.24□□□□□ -1.89
ATRX-209ENST00000623242 C15orf54Q8N8G6 183 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 C8orf31Q8N9H6 132 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 ZNRF1Q8ND25 227 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 CT45A3Q8NHU0 189 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 PLPPR1Q8TBJ4 325 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 CACNG8Q8WXS5 425 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 TAF15Q92804 592 aaKnown RBP eCLIP3.24□□□□□ -1.89
ATRX-209ENST00000623242 CCL19Q99731 98 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 ASCL2Q99929 193 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 CHRDL1Q9BU40 450 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 CLEC7AQ9BXN2 247 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 CBLN4Q9NTU7 201 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 GNG13Q9P2W3 67 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 WASHC3Q9Y3C0 194 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 OR51B2Q9Y5P1 312 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 PUS1Q9Y606 427 aaKnown RBP eCLIP3.24□□□□□ -1.89
ATRX-209ENST00000623242 NBEAQ8NFP9 2946 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 MPDZO75970 2070 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 SHANK1Q9Y566 2161 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 NAV2Q8IVL1 2488 aa3.24□□□□□ -1.89
ATRX-209ENST00000623242 IGKV1D-17A0A075B6S4 117 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 A0A087WZ39 114 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 A0A087X0K7 114 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 TRAV1-1A0A0B4J248 108 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 TRAV39A0A0B4J263 110 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 PPIAL4CA0A0B4J2A2 164 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 IGKV1D-13A0A0B4J2D9 117 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 A0A1B0GWJ7 208 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 MAP1LC3B2A6NCE7 125 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 FAM74A7A6NL05 159 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 ZFP92A6NM28 416 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 ZNF727A8MUV8 499 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 SHISA9B4DS77 424 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 E7EQL1 145 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 FNDC10F2Z333 226 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 H3BP45 60 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 KBTBD11O94819 623 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 PPIAL4GP0DN37 164 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 OR13C7P0DN81 318 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 IGKV1-13P0DP09 117 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 NPY1RP25929 384 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 S100A2P29034 98 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 SSTR5P35346 364 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 GPX4P36969 197 aaPredicted RBP3.23□□□□□ -1.89
ATRX-209ENST00000623242 OPRK1P41145 380 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 GPR6P46095 362 aaPredicted RBP3.23□□□□□ -1.89
ATRX-209ENST00000623242 CDC34P49427 236 aaPredicted RBP3.23□□□□□ -1.89
ATRX-209ENST00000623242 CEBPDP49716 269 aaPredicted RBP3.23□□□□□ -1.89
ATRX-209ENST00000623242 GNG10P50151 68 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 KRTAP10-6P60371 365 aaPredicted RBP3.23□□□□□ -1.89
ATRX-209ENST00000623242 RPL8P62917 257 aaKnown RBP3.23□□□□□ -1.89
ATRX-209ENST00000623242 FLI1Q01543 452 aaPredicted RBP3.23□□□□□ -1.89
ATRX-209ENST00000623242 TMEM267Q0VDI3 215 aaPredicted RBP3.23□□□□□ -1.89
ATRX-209ENST00000623242 IL15RAQ13261 267 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 HERPUD1Q15011 391 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 HAGHQ16775 308 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 TMEM241Q24JQ0 296 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 HLA-DRB5Q30154 266 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 MOB3BQ86TA1 216 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 LRP11Q86VZ4 500 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 RP1L1Q8IWN7 2480 aaPredicted RBP3.23□□□□□ -1.89
ATRX-209ENST00000623242 ABHD12Q8N2K0 398 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 TEX29Q8N6K0 151 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 CD177Q8N6Q3 437 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 OR2T6Q8NHC8 308 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 RNASEH2CQ8TDP1 164 aaKnown RBP3.23□□□□□ -1.89
ATRX-209ENST00000623242 PCNPQ8WW12 178 aaKnown RBP3.23□□□□□ -1.89
ATRX-209ENST00000623242 MAP1LC3BQ9GZQ8 125 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 WDR61Q9GZS3 305 aaKnown RBP3.23□□□□□ -1.89
ATRX-209ENST00000623242 LPAR2Q9HBW0 351 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 CYTL1Q9NRR1 136 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 TMEM167BQ9NRX6 74 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 TECRQ9NZ01 308 aaKnown RBP3.23□□□□□ -1.89
ATRX-209ENST00000623242 ONECUT1Q9UBC0 465 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 KAAG1Q9UBP8 84 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 RPUSD1Q9UJJ7 312 aaKnown RBP3.23□□□□□ -1.89
ATRX-209ENST00000623242 CARHSP1Q9Y2V2 147 aaKnown RBP3.23□□□□□ -1.89
ATRX-209ENST00000623242 GTF3C1Q12789 2109 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 MYO7BQ6PIF6 2116 aa3.23□□□□□ -1.89
ATRX-209ENST00000623242 ASH1LQ9NR48 2969 aaKnown RBP3.22□□□□□ -1.89
ATRX-209ENST00000623242 MED12LQ86YW9 2145 aa3.22□□□□□ -1.89
ATRX-209ENST00000623242 ANKRD17O75179 2603 aaKnown RBP3.22□□□□□ -1.89
ATRX-209ENST00000623242 LOC105371242A0A075B767 164 aa3.22□□□□□ -1.89
ATRX-209ENST00000623242 TRAV30A0A087WSZ9 112 aa3.22□□□□□ -1.89
ATRX-209ENST00000623242 IGKV1-6A0A0C4DH72 117 aa3.22□□□□□ -1.89
ATRX-209ENST00000623242 A0A1B0GV50 99 aa3.22□□□□□ -1.89
ATRX-209ENST00000623242 MEX3AA1L020 520 aaKnown RBP3.22□□□□□ -1.89
ATRX-209ENST00000623242 IGSF23A1L1A6 192 aa3.22□□□□□ -1.89
ATRX-209ENST00000623242 SRRM4A7MD48 611 aaKnown RBP3.22□□□□□ -1.89
ATRX-209ENST00000623242 OOSP1A8MZH6 123 aa3.22□□□□□ -1.89
ATRX-209ENST00000623242 TMEM250H0YL14 139 aa3.22□□□□□ -1.89
ATRX-209ENST00000623242 CLDN34H7C241 214 aa3.22□□□□□ -1.89
ATRX-209ENST00000623242 COX7A2P2O60397 106 aa3.22□□□□□ -1.89
ATRX-209ENST00000623242 S1PR2O95136 353 aa3.22□□□□□ -1.89
ATRX-209ENST00000623242 OPN1MWP04001 364 aa3.22□□□□□ -1.89
ATRX-209ENST00000623242 FBP1P09467 338 aa3.22□□□□□ -1.89
ATRX-209ENST00000623242 OPN1MW2P0DN77 364 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms