RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 TIGITQ495A1 244 aa10.51□□□□□ -0.73
PCDHGC3-208ENST00000622836 SBSPONQ8IVN8 264 aa10.51□□□□□ -0.73
PCDHGC3-208ENST00000622836 ENKURQ8TC29 256 aa10.51□□□□□ -0.73
PCDHGC3-208ENST00000622836 SMPXQ9UHP9 88 aa10.51□□□□□ -0.73
PCDHGC3-208ENST00000622836 TBC1D24Q9ULP9 559 aa10.51□□□□□ -0.73
PCDHGC3-208ENST00000622836 MPTX1A8MV57 137 aa10.5□□□□□ -0.73
PCDHGC3-208ENST00000622836 OR11H12B2RN74 326 aa10.5□□□□□ -0.73
PCDHGC3-208ENST00000622836 CHEK1O14757 476 aa10.5□□□□□ -0.73
PCDHGC3-208ENST00000622836 UPK1BO75841 260 aa10.5□□□□□ -0.73
PCDHGC3-208ENST00000622836 H2AFB2P0C5Z0 115 aa10.5□□□□□ -0.73
PCDHGC3-208ENST00000622836 NKX2-1P43699 371 aaPredicted RBP10.5□□□□□ -0.73
PCDHGC3-208ENST00000622836 ASAH1Q13510 395 aa10.5□□□□□ -0.73
PCDHGC3-208ENST00000622836 OR1S2Q8NGQ3 325 aa10.5□□□□□ -0.73
PCDHGC3-208ENST00000622836 MITD1Q8WV92 249 aa10.5□□□□□ -0.73
PCDHGC3-208ENST00000622836 NPIPB3Q92617 1050 aa10.5□□□□□ -0.73
PCDHGC3-208ENST00000622836 NARS2Q96I59 477 aaKnown RBP10.5□□□□□ -0.73
PCDHGC3-208ENST00000622836 SLC35E1Q96K37 410 aa10.5□□□□□ -0.73
PCDHGC3-208ENST00000622836 SPAG8Q99932 426 aaPredicted RBP10.5□□□□□ -0.73
PCDHGC3-208ENST00000622836 COL7A1Q02388 2944 aa10.5□□□□□ -0.73
PCDHGC3-208ENST00000622836 A8MZ25 164 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 IGLC1P0CG04 106 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 NPPCP23582 126 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 IAH1Q2TAA2 248 aaPredicted RBP10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 SPANXN5Q5MJ07 72 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 DEFB125Q8N687 156 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 Q8WTZ3 238 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 ZNF414Q96IQ9 312 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 METTL26Q96S19 204 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 RNF2Q99496 336 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 SEC22CQ9BRL7 303 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 WFDC10AQ9H1F0 79 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 ZMAT4Q9H898 229 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 SRD5A3Q9H8P0 318 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 ZFAND3Q9H8U3 227 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 C19orf73Q9NVV2 129 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 GSKIPQ9P0R6 139 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 U3KQK5 164 aa10.49□□□□□ -0.73
PCDHGC3-208ENST00000622836 IGKV3-7A0A075B6H7 116 aa10.48□□□□□ -0.73
PCDHGC3-208ENST00000622836 IGHV3-66A0A0C4DH42 116 aa10.48□□□□□ -0.73
PCDHGC3-208ENST00000622836 OR4C46A6NHA9 309 aa10.48□□□□□ -0.73
PCDHGC3-208ENST00000622836 ZFP92A6NM28 416 aa10.48□□□□□ -0.73
PCDHGC3-208ENST00000622836 FAM25EA8MYX2 175 aa10.48□□□□□ -0.73
PCDHGC3-208ENST00000622836 H3BP45 60 aa10.48□□□□□ -0.73
PCDHGC3-208ENST00000622836 TSPAN4O14817 238 aa10.48□□□□□ -0.73
PCDHGC3-208ENST00000622836 SSSCA1O60232 199 aa10.48□□□□□ -0.73
PCDHGC3-208ENST00000622836 IGKV1-17P01599 117 aa10.48□□□□□ -0.73
PCDHGC3-208ENST00000622836 GPX4P36969 197 aaPredicted RBP10.48□□□□□ -0.73
PCDHGC3-208ENST00000622836 POLR2GP62487 172 aaKnown RBP eCLIP10.48□□□□□ -0.73
PCDHGC3-208ENST00000622836 RPL11P62913 178 aaKnown RBP10.48□□□□□ -0.73
PCDHGC3-208ENST00000622836 ZNF431Q8TF32 576 aaPredicted RBP10.48□□□□□ -0.73
PCDHGC3-208ENST00000622836 TMEM231Q9H6L2 316 aa10.48□□□□□ -0.73
PCDHGC3-208ENST00000622836 STRAPQ9Y3F4 350 aaKnown RBP10.48□□□□□ -0.73
PCDHGC3-208ENST00000622836 A0A1W2PS18 150 aa10.47□□□□□ -0.73
PCDHGC3-208ENST00000622836 CCSO14618 274 aa10.47□□□□□ -0.73
PCDHGC3-208ENST00000622836 TFPI2P48307 235 aa10.47□□□□□ -0.73
PCDHGC3-208ENST00000622836 YPEL3P61236 119 aaPredicted RBP10.47□□□□□ -0.73
PCDHGC3-208ENST00000622836 TCF24Q7RTU0 167 aa10.47□□□□□ -0.73
PCDHGC3-208ENST00000622836 ZBTB8BQ8NAP8 495 aaPredicted RBP10.47□□□□□ -0.73
PCDHGC3-208ENST00000622836 OR4D5Q8NGN0 318 aa10.47□□□□□ -0.73
PCDHGC3-208ENST00000622836 ST8SIA2Q92186 375 aa10.47□□□□□ -0.73
PCDHGC3-208ENST00000622836 C5orf51A6NDU8 294 aa10.46□□□□□ -0.73
PCDHGC3-208ENST00000622836 APOHP02749 345 aaPredicted RBP10.46□□□□□ -0.73
PCDHGC3-208ENST00000622836 IL4P05112 153 aa10.46□□□□□ -0.73
PCDHGC3-208ENST00000622836 CD5P06127 495 aa10.46□□□□□ -0.73
PCDHGC3-208ENST00000622836 FABP1P07148 127 aa10.46□□□□□ -0.73
PCDHGC3-208ENST00000622836 RD3LP0DJH9 198 aa10.46□□□□□ -0.73
PCDHGC3-208ENST00000622836 DEFA1P59665 94 aa10.46□□□□□ -0.73
PCDHGC3-208ENST00000622836 DEFA3P59666 94 aa10.46□□□□□ -0.73
PCDHGC3-208ENST00000622836 PAFAH1B2P68402 229 aa10.46□□□□□ -0.73
PCDHGC3-208ENST00000622836 ID3Q02535 119 aa10.46□□□□□ -0.73
PCDHGC3-208ENST00000622836 GAMTQ14353 236 aa10.46□□□□□ -0.73
PCDHGC3-208ENST00000622836 GBGT1Q8N5D6 347 aa10.46□□□□□ -0.73
PCDHGC3-208ENST00000622836 C12orf45Q8N5I9 185 aaPredicted RBP10.46□□□□□ -0.73
PCDHGC3-208ENST00000622836 GRAMD2BQ96HH9 432 aa10.46□□□□□ -0.73
PCDHGC3-208ENST00000622836 PSENENQ9NZ42 101 aa10.46□□□□□ -0.73
PCDHGC3-208ENST00000622836 UBQLN2Q9UHD9 624 aa10.46□□□□□ -0.73
PCDHGC3-208ENST00000622836 DNASE2O00115 360 aaPredicted RBP10.45□□□□□ -0.74
PCDHGC3-208ENST00000622836 TOMM40O96008 361 aa10.45□□□□□ -0.74
PCDHGC3-208ENST00000622836 RCHY1Q96PM5 261 aa10.45□□□□□ -0.74
PCDHGC3-208ENST00000622836 PBDC1Q9BVG4 233 aa10.45□□□□□ -0.74
PCDHGC3-208ENST00000622836 VSIRQ9H7M9 311 aa10.45□□□□□ -0.74
PCDHGC3-208ENST00000622836 GPN1Q9HCN4 374 aaPredicted RBP10.45□□□□□ -0.74
PCDHGC3-208ENST00000622836 DFFBO76075 338 aa10.44□□□□□ -0.74
PCDHGC3-208ENST00000622836 HNRNPCP07910 306 aaKnown RBP eCLIP10.44□□□□□ -0.74
PCDHGC3-208ENST00000622836 PSG1P11464 419 aa10.44□□□□□ -0.74
PCDHGC3-208ENST00000622836 P2RY1P47900 373 aa10.44□□□□□ -0.74
PCDHGC3-208ENST00000622836 IFITM3Q01628 133 aa10.44□□□□□ -0.74
PCDHGC3-208ENST00000622836 AKR1C1Q04828 323 aa10.44□□□□□ -0.74
PCDHGC3-208ENST00000622836 HAGHQ16775 308 aa10.44□□□□□ -0.74
PCDHGC3-208ENST00000622836 OR8G2PQ6IF36 304 aa10.44□□□□□ -0.74
PCDHGC3-208ENST00000622836 WFDC3Q8IUB2 231 aa10.44□□□□□ -0.74
PCDHGC3-208ENST00000622836 OR51G1Q8NGK1 321 aa10.44□□□□□ -0.74
PCDHGC3-208ENST00000622836 RAB40CQ96S21 281 aa10.44□□□□□ -0.74
PCDHGC3-208ENST00000622836 SMCO3A2RU48 225 aa10.43□□□□□ -0.74
PCDHGC3-208ENST00000622836 L7N2F9 121 aa10.43□□□□□ -0.74
PCDHGC3-208ENST00000622836 CRYBB3P26998 211 aa10.43□□□□□ -0.74
PCDHGC3-208ENST00000622836 EIF2B2P49770 351 aaKnown RBP10.43□□□□□ -0.74
PCDHGC3-208ENST00000622836 VAMP2P63027 116 aa10.43□□□□□ -0.74
PCDHGC3-208ENST00000622836 ACOT7LQ6ZUV0 252 aa10.43□□□□□ -0.74
PCDHGC3-208ENST00000622836 NRARPQ7Z6K4 114 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms