RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 AP2S1P53680 142 aaPredicted RBP17.13■□□□□ 0.33
CPSF1-214ENST00000622776 C12orf74Q32Q52 190 aa17.13■□□□□ 0.33
CPSF1-214ENST00000622776 AARDQ4LEZ3 155 aa17.13■□□□□ 0.33
CPSF1-214ENST00000622776 PRSS54Q6PEW0 395 aa17.13■□□□□ 0.33
CPSF1-214ENST00000622776 OR1S2Q8NGQ3 325 aa17.13■□□□□ 0.33
CPSF1-214ENST00000622776 OR13C8Q8NGS7 320 aa17.13■□□□□ 0.33
CPSF1-214ENST00000622776 TERB2Q8NHR7 220 aa17.13■□□□□ 0.33
CPSF1-214ENST00000622776 Q8WTZ3 238 aa17.13■□□□□ 0.33
CPSF1-214ENST00000622776 MTFP1Q9UDX5 166 aa17.13■□□□□ 0.33
CPSF1-214ENST00000622776 DEFB131BA0A096LNP1 70 aa17.12■□□□□ 0.33
CPSF1-214ENST00000622776 B3GALNT1O75752 331 aa17.12■□□□□ 0.33
CPSF1-214ENST00000622776 AMBPP02760 352 aa17.12■□□□□ 0.33
CPSF1-214ENST00000622776 RND2P52198 227 aa17.12■□□□□ 0.33
CPSF1-214ENST00000622776 YPEL3P61236 119 aaPredicted RBP17.12■□□□□ 0.33
CPSF1-214ENST00000622776 ZNF767PQ75MW2 155 aa17.12■□□□□ 0.33
CPSF1-214ENST00000622776 OR4D10Q8NGI6 311 aa17.12■□□□□ 0.33
CPSF1-214ENST00000622776 OR52E5Q8NH55 327 aa17.12■□□□□ 0.33
CPSF1-214ENST00000622776 HEYLQ9NQ87 328 aaPredicted RBP17.12■□□□□ 0.33
CPSF1-214ENST00000622776 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.12■□□□□ 0.33
CPSF1-214ENST00000622776 SLC25A4P12235 298 aa17.11■□□□□ 0.33
CPSF1-214ENST00000622776 OR10J1P30954 320 aa17.11■□□□□ 0.33
CPSF1-214ENST00000622776 RORCP51449 518 aa17.11■□□□□ 0.33
CPSF1-214ENST00000622776 DHODHQ02127 395 aa17.11■□□□□ 0.33
CPSF1-214ENST00000622776 MZT2AQ6P582 158 aa17.11■□□□□ 0.33
CPSF1-214ENST00000622776 FAM219AQ8IW50 185 aa17.11■□□□□ 0.33
CPSF1-214ENST00000622776 C1QTNF4Q9BXJ3 329 aa17.11■□□□□ 0.33
CPSF1-214ENST00000622776 FAM90A26D6RGX4 464 aa17.1■□□□□ 0.33
CPSF1-214ENST00000622776 CDS2O95674 445 aa17.1■□□□□ 0.33
CPSF1-214ENST00000622776 NUTF2P61970 127 aaKnown RBP17.1■□□□□ 0.33
CPSF1-214ENST00000622776 SCGB2B2Q4G0G5 96 aa17.1■□□□□ 0.33
CPSF1-214ENST00000622776 C2orf83Q53S99 150 aa17.1■□□□□ 0.33
CPSF1-214ENST00000622776 MARCH1Q8TCQ1 289 aa17.1■□□□□ 0.33
CPSF1-214ENST00000622776 RNASEH2CQ8TDP1 164 aaKnown RBP17.1■□□□□ 0.33
CPSF1-214ENST00000622776 TMEM222Q9H0R3 208 aa17.1■□□□□ 0.33
CPSF1-214ENST00000622776 XCL2Q9UBD3 114 aa17.1■□□□□ 0.33
CPSF1-214ENST00000622776 RYR1P21817 5038 aa17.1■□□□□ 0.33
CPSF1-214ENST00000622776 A0A1B0GVY2 172 aa17.09■□□□□ 0.33
CPSF1-214ENST00000622776 TNFAIP8O95379 198 aa17.09■□□□□ 0.33
CPSF1-214ENST00000622776 CD74P04233 296 aa17.09■□□□□ 0.33
CPSF1-214ENST00000622776 SNRPD3P62318 126 aaKnown RBP17.09■□□□□ 0.33
CPSF1-214ENST00000622776 USF2Q15853 346 aaPredicted RBP17.09■□□□□ 0.33
CPSF1-214ENST00000622776 POM121L12Q8N7R1 296 aa17.09■□□□□ 0.33
CPSF1-214ENST00000622776 ABHD1Q96SE0 405 aa17.09■□□□□ 0.33
CPSF1-214ENST00000622776 SEPSECSQ9HD40 501 aaKnown RBP17.09■□□□□ 0.33
CPSF1-214ENST00000622776 EXTL2Q9UBQ6 330 aa17.09■□□□□ 0.33
CPSF1-214ENST00000622776 H3BMM0 161 aa17.08■□□□□ 0.32
CPSF1-214ENST00000622776 RAB3DO95716 219 aa17.08■□□□□ 0.32
CPSF1-214ENST00000622776 IL4P05112 153 aa17.08■□□□□ 0.32
CPSF1-214ENST00000622776 OR5AC1P0C628 307 aa17.08■□□□□ 0.32
CPSF1-214ENST00000622776 P0DMU3 169 aa17.08■□□□□ 0.32
CPSF1-214ENST00000622776 FAM231AP0DMU4 169 aa17.08■□□□□ 0.32
CPSF1-214ENST00000622776 FAM231CP0DMU5 169 aa17.08■□□□□ 0.32
CPSF1-214ENST00000622776 TMEM229BQ8NBD8 167 aa17.08■□□□□ 0.32
CPSF1-214ENST00000622776 LHFPL5Q8TAF8 219 aa17.08■□□□□ 0.32
CPSF1-214ENST00000622776 GLYATL2Q8WU03 294 aa17.08■□□□□ 0.32
CPSF1-214ENST00000622776 NDUFAF3Q9BU61 184 aa17.08■□□□□ 0.32
CPSF1-214ENST00000622776 SCRT1Q9BWW7 348 aa17.08■□□□□ 0.32
CPSF1-214ENST00000622776 NRN1Q9NPD7 142 aa17.08■□□□□ 0.32
CPSF1-214ENST00000622776 CACNG5Q9UF02 275 aa17.08■□□□□ 0.32
CPSF1-214ENST00000622776 MUC4Q99102 2169 aa17.07■□□□□ 0.32
CPSF1-214ENST00000622776 NPY1RP25929 384 aa17.07■□□□□ 0.32
CPSF1-214ENST00000622776 TAS2R19P59542 299 aa17.07■□□□□ 0.32
CPSF1-214ENST00000622776 SLC24A4Q8NFF2 622 aa17.07■□□□□ 0.32
CPSF1-214ENST00000622776 TMEM170AQ8WVE7 144 aa17.07■□□□□ 0.32
CPSF1-214ENST00000622776 RBPMSQ93062 196 aaKnown RBP17.07■□□□□ 0.32
CPSF1-214ENST00000622776 GPR146Q96CH1 333 aa17.07■□□□□ 0.32
CPSF1-214ENST00000622776 CEBPZOSA8MTT3 80 aa17.06■□□□□ 0.32
CPSF1-214ENST00000622776 BUB3O43684 328 aa17.06■□□□□ 0.32
CPSF1-214ENST00000622776 STEAP1BQ6NZ63 245 aa17.06■□□□□ 0.32
CPSF1-214ENST00000622776 SIGLEC15Q6ZMC9 328 aa17.06■□□□□ 0.32
CPSF1-214ENST00000622776 SELENOHQ8IZQ5 122 aaKnown RBP17.06■□□□□ 0.32
CPSF1-214ENST00000622776 AP3S1Q92572 193 aa17.06■□□□□ 0.32
CPSF1-214ENST00000622776 NPIPB3Q92617 1050 aa17.06■□□□□ 0.32
CPSF1-214ENST00000622776 DNAH11Q96DT5 4516 aa17.06■□□□□ 0.32
CPSF1-214ENST00000622776 DYNC1H1Q14204 4646 aaKnown RBP17.05■□□□□ 0.32
CPSF1-214ENST00000622776 TEX13DA0A0J9YY54 714 aaPredicted RBP17.05■□□□□ 0.32
CPSF1-214ENST00000622776 GSTZ1O43708 216 aaPredicted RBP17.05■□□□□ 0.32
CPSF1-214ENST00000622776 NXPH3O95157 252 aa17.05■□□□□ 0.32
CPSF1-214ENST00000622776 RD3LP0DJH9 198 aa17.05■□□□□ 0.32
CPSF1-214ENST00000622776 ETFRF1Q6IPR1 90 aa17.05■□□□□ 0.32
CPSF1-214ENST00000622776 C15orf40Q8WUR7 153 aa17.05■□□□□ 0.32
CPSF1-214ENST00000622776 RTBDNQ9BSG5 229 aaPredicted RBP17.05■□□□□ 0.32
CPSF1-214ENST00000622776 NAA60Q9H7X0 242 aa17.05■□□□□ 0.32
CPSF1-214ENST00000622776 C14orf166Q9Y224 244 aaKnown RBP17.05■□□□□ 0.32
CPSF1-214ENST00000622776 TOMM40O96008 361 aa17.04■□□□□ 0.32
CPSF1-214ENST00000622776 HLA-DRB4P13762 266 aa17.04■□□□□ 0.32
CPSF1-214ENST00000622776 ZNF182P17025 639 aaPredicted RBP17.04■□□□□ 0.32
CPSF1-214ENST00000622776 ACY3Q96HD9 319 aa17.04■□□□□ 0.32
CPSF1-214ENST00000622776 HLA-DRB4X5D2U9 266 aa17.04■□□□□ 0.32
CPSF1-214ENST00000622776 PRSS29PA6NIE9 313 aa17.03■□□□□ 0.32
CPSF1-214ENST00000622776 M0R2N4 97 aa17.03■□□□□ 0.32
CPSF1-214ENST00000622776 RTL8CO15255 209 aa17.03■□□□□ 0.32
CPSF1-214ENST00000622776 MEF2DQ14814 521 aa17.03■□□□□ 0.32
CPSF1-214ENST00000622776 TMEM268Q5VZI3 342 aa17.03■□□□□ 0.32
CPSF1-214ENST00000622776 ZNF705AQ6ZN79 300 aaPredicted RBP17.03■□□□□ 0.32
CPSF1-214ENST00000622776 NEU1Q99519 415 aa17.03■□□□□ 0.32
CPSF1-214ENST00000622776 NKX2-1P43699 371 aaPredicted RBP17.02■□□□□ 0.32
CPSF1-214ENST00000622776 FAAP20Q6NZ36 180 aa17.02■□□□□ 0.32
CPSF1-214ENST00000622776 NOXA1Q86UR1 476 aa17.02■□□□□ 0.32
CPSF1-214ENST00000622776 ZNF705FA8MVS1 300 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms