RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 OR4F5Q8NH21 305 aa13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 VN1R17PQ8TDU5 208 aa13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 WDR61Q9GZS3 305 aaKnown RBP13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 C21orf62Q9NYP8 219 aa13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 WDR83OSQ9Y284 106 aa13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 IGHV3-23P01764 117 aa13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 RAB5CP51148 216 aa13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 FOXE3Q13461 319 aa13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 KLHDC1Q8N7A1 406 aa13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 TMEM116Q8NCL8 245 aa13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 PARD6GQ9BYG4 376 aaPredicted RBP13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 ELANEP08246 267 aa13.86□□□□□ -0.19
PTCHD3-202ENST00000622555 M6PRP20645 277 aa13.86□□□□□ -0.19
PTCHD3-202ENST00000622555 MFAP4P55083 255 aa13.86□□□□□ -0.19
PTCHD3-202ENST00000622555 TEPPQ6URK8 271 aa13.86□□□□□ -0.19
PTCHD3-202ENST00000622555 OR4X1Q8NH49 305 aa13.86□□□□□ -0.19
PTCHD3-202ENST00000622555 SCO1O75880 301 aa13.85□□□□□ -0.19
PTCHD3-202ENST00000622555 MDKP21741 143 aaPredicted RBP13.85□□□□□ -0.19
PTCHD3-202ENST00000622555 RUNX1Q01196 453 aa13.85□□□□□ -0.19
PTCHD3-202ENST00000622555 Q56UQ5 140 aa13.85□□□□□ -0.19
PTCHD3-202ENST00000622555 COMMD1Q8N668 190 aa13.85□□□□□ -0.19
PTCHD3-202ENST00000622555 OR5AU1Q8NGC0 362 aa13.85□□□□□ -0.19
PTCHD3-202ENST00000622555 EEF1AKMT3Q96AZ1 226 aa13.85□□□□□ -0.19
PTCHD3-202ENST00000622555 USMG5Q96IX5 58 aa13.85□□□□□ -0.19
PTCHD3-202ENST00000622555 LSM4Q9Y4Z0 139 aaKnown RBP13.85□□□□□ -0.19
PTCHD3-202ENST00000622555 SETD2Q9BYW2 2564 aaPredicted RBP13.85□□□□□ -0.19
PTCHD3-202ENST00000622555 TMEM218A2RU14 115 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 MPDU1O75352 247 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 NPBWR1P48145 328 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 C10orf91Q5T1B1 145 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 ZNF502Q8TBZ5 544 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 RSG1Q9BU20 258 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 NPCDR1Q9BY65 106 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 IGKV1OR2-108A0A075B7D4 117 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 A0A0G2JLM5 398 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 ZFP92A6NM28 416 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 GNG7O60262 68 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 CLN5O75503 358 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 RPLP1P05386 114 aaKnown RBP13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 ATP6V0CP27449 155 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 RAB31Q13636 194 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 Q6ZRG5 221 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 THAP8Q8NA92 274 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 MGST2Q99735 147 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 SH3BGRL3Q9H299 93 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 HRH4Q9H3N8 390 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 RNF114Q9Y508 228 aa13.84□□□□□ -0.19
PTCHD3-202ENST00000622555 TRBV7-1A0A0A6YYK4 115 aa13.83□□□□□ -0.2
PTCHD3-202ENST00000622555 IGHV3-11P01762 117 aa13.83□□□□□ -0.2
PTCHD3-202ENST00000622555 OR10J1P30954 320 aa13.83□□□□□ -0.2
PTCHD3-202ENST00000622555 CAMLGP49069 296 aa13.83□□□□□ -0.2
PTCHD3-202ENST00000622555 SRSF3P84103 164 aaKnown RBP13.83□□□□□ -0.2
PTCHD3-202ENST00000622555 ZNF709Q8N972 641 aa13.83□□□□□ -0.2
PTCHD3-202ENST00000622555 OR4X2Q8NGF9 303 aa13.83□□□□□ -0.2
PTCHD3-202ENST00000622555 GNPNAT1Q96EK6 184 aaPredicted RBP13.83□□□□□ -0.2
PTCHD3-202ENST00000622555 TXN2Q99757 166 aa13.83□□□□□ -0.2
PTCHD3-202ENST00000622555 CLPSL1A2RUU4 121 aa13.82□□□□□ -0.2
PTCHD3-202ENST00000622555 OR2T8A6NH00 312 aa13.82□□□□□ -0.2
PTCHD3-202ENST00000622555 F8W735 103 aaPredicted RBP13.82□□□□□ -0.2
PTCHD3-202ENST00000622555 HAX1O00165 279 aa13.82□□□□□ -0.2
PTCHD3-202ENST00000622555 AGPAT2O15120 278 aa13.82□□□□□ -0.2
PTCHD3-202ENST00000622555 RNF152Q8N8N0 203 aa13.82□□□□□ -0.2
PTCHD3-202ENST00000622555 CCDC140Q96MF4 163 aa13.82□□□□□ -0.2
PTCHD3-202ENST00000622555 RFNGQ9Y644 331 aa13.82□□□□□ -0.2
PTCHD3-202ENST00000622555 IGKV1D-37A0A075B6S9 117 aa13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 C17orf112F2Z3M2 114 aa13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 CD5P06127 495 aa13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 IGLC1P0CG04 106 aa13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 FCGR2BP31994 310 aaPredicted RBP13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 GPR183P32249 361 aa13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 CLEC19AQ6UXS0 136 aa13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 WIPF2Q8TF74 440 aaPredicted RBP13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 TRGV9Q99603 122 aa13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 GGTLC1Q9BX51 225 aa13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 TRAV30A0A087WSZ9 112 aa13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 UMAD1C9J7I0 102 aa13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 CLEC3BP05452 202 aa13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 KIAA0141Q14154 515 aaPredicted RBP13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 TIGITQ495A1 244 aa13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 ZNF491Q8N8L2 437 aa13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 MYOZ3Q8TDC0 251 aa13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 SCRT1Q9BWW7 348 aa13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 GAR1Q9NY12 217 aaKnown RBP13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 TIMM9Q9Y5J7 89 aa13.81□□□□□ -0.2
PTCHD3-202ENST00000622555 TCRBV4S1A1TA0A5B7 111 aa13.8□□□□□ -0.2
PTCHD3-202ENST00000622555 SCGB2A1O75556 95 aa13.8□□□□□ -0.2
PTCHD3-202ENST00000622555 ZNF90Q03938 601 aa13.8□□□□□ -0.2
PTCHD3-202ENST00000622555 CYP2G1PQ6ZSU1 146 aa13.8□□□□□ -0.2
PTCHD3-202ENST00000622555 OR2G3Q8NGZ4 309 aa13.8□□□□□ -0.2
PTCHD3-202ENST00000622555 OR5B12Q96R08 314 aa13.8□□□□□ -0.2
PTCHD3-202ENST00000622555 PSMG3Q9BT73 122 aaPredicted RBP13.8□□□□□ -0.2
PTCHD3-202ENST00000622555 CARHSP1Q9Y2V2 147 aaKnown RBP13.8□□□□□ -0.2
PTCHD3-202ENST00000622555 IGKV1-17P01599 117 aa13.79□□□□□ -0.2
PTCHD3-202ENST00000622555 ADCYAP1P18509 176 aa13.79□□□□□ -0.2
PTCHD3-202ENST00000622555 PROK1P58294 105 aa13.79□□□□□ -0.2
PTCHD3-202ENST00000622555 TCTEX1D4Q5JR98 221 aa13.79□□□□□ -0.2
PTCHD3-202ENST00000622555 KHDC1LQ5JSQ8 128 aa13.79□□□□□ -0.2
PTCHD3-202ENST00000622555 MIC13Q5XKP0 118 aa13.79□□□□□ -0.2
PTCHD3-202ENST00000622555 KCNIP2Q9NS61 270 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms