RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 G6PCP35575 357 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 HHEXQ03014 270 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 ZNF474Q6S9Z5 364 aaPredicted RBP6.51□□□□□ -1.37
VPS11-209ENST00000622309 TEX29Q8N6K0 151 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 SSMEM1Q8WWF3 244 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 TMEM54Q969K7 222 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 PKIGQ9Y2B9 76 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 DYSFO75923 2080 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 DHHO43323 396 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 NMUP48645 174 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 PCSK4Q6UW60 755 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 Q6ZUT4 128 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 ZADH2Q8N4Q0 377 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 ZNF502Q8TBZ5 544 aa6.51□□□□□ -1.37
VPS11-209ENST00000622309 FOXH1O75593 365 aa6.5□□□□□ -1.37
VPS11-209ENST00000622309 PSG5Q15238 335 aa6.5□□□□□ -1.37
VPS11-209ENST00000622309 BCL6BQ8N143 479 aaPredicted RBP6.5□□□□□ -1.37
VPS11-209ENST00000622309 LINC00312Q9Y6C7 94 aa6.5□□□□□ -1.37
VPS11-209ENST00000622309 PCDH15Q96QU1 1955 aa6.5□□□□□ -1.37
VPS11-209ENST00000622309 GAGE12JA6NER3 117 aa6.5□□□□□ -1.37
VPS11-209ENST00000622309 PRR19A6NJB7 356 aa6.5□□□□□ -1.37
VPS11-209ENST00000622309 HIGD1CA8MV81 97 aa6.5□□□□□ -1.37
VPS11-209ENST00000622309 GAGE7O76087 117 aa6.5□□□□□ -1.37
VPS11-209ENST00000622309 CSN3P07498 182 aa6.5□□□□□ -1.37
VPS11-209ENST00000622309 GAGE12FP0CL80 117 aa6.5□□□□□ -1.37
VPS11-209ENST00000622309 GAGE12GP0CL81 117 aa6.5□□□□□ -1.37
VPS11-209ENST00000622309 GAGE12IP0CL82 117 aa6.5□□□□□ -1.37
VPS11-209ENST00000622309 NTF4P34130 210 aa6.5□□□□□ -1.37
VPS11-209ENST00000622309 ZNF816Q0VGE8 651 aaPredicted RBP6.5□□□□□ -1.37
VPS11-209ENST00000622309 GAGE4Q13068 117 aa6.5□□□□□ -1.37
VPS11-209ENST00000622309 DUX4L9Q6RFH8 374 aaPredicted RBP6.5□□□□□ -1.37
VPS11-209ENST00000622309 Q8N7P7 452 aa6.5□□□□□ -1.37
VPS11-209ENST00000622309 OSR1Q8TAX0 266 aaPredicted RBP6.5□□□□□ -1.37
VPS11-209ENST00000622309 FAM110DQ8TAY7 271 aaPredicted RBP6.5□□□□□ -1.37
VPS11-209ENST00000622309 TMEM167BQ9NRX6 74 aa6.5□□□□□ -1.37
VPS11-209ENST00000622309 NCOA6Q14686 2063 aaPredicted RBP6.5□□□□□ -1.37
VPS11-209ENST00000622309 C5orf49A4QMS7 147 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 FAM90A10PA6NDY2 464 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 FAM90A18PA6NE21 464 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 FAM90A16PA6NEW6 464 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 FAM90A20PA6NIJ5 464 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 FAM90A8PA6NJQ4 464 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 FAM90A7PA6NKC0 464 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 FAM90A22PA8MWA6 464 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 A8MWL6 223 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 FAM90A12PA8MX19 464 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 FAM90A5PA8MXJ8 464 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 FAM90A23PA8MXZ1 464 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 K7ERJ3 54 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 FAM90A15PP0C7V4 464 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 FAM90A13PP0C7W8 464 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 FAM90A14PP0C7W9 464 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 FAM90A24PP0C7X0 464 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 CSN1S1P47710 185 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 ZNF138P52744 262 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 TEPPQ6URK8 271 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 Q6ZSR3 168 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 OR1L4Q8NGR5 311 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 DDB2Q92466 427 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 NHP2Q9NX24 153 aaKnown RBP6.49□□□□□ -1.37
VPS11-209ENST00000622309 IDI2-AS1Q9NZ38 188 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 IGHV4-34P06331 123 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 XGP55808 180 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 HBBP68871 147 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 FOXI1Q12951 378 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 EFNB3Q15768 340 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 ASPHD1Q5U4P2 390 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 ATP5L2Q7Z4Y8 100 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 CDIP1Q9H305 208 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 HEYLQ9NQ87 328 aaPredicted RBP6.49□□□□□ -1.37
VPS11-209ENST00000622309 INSIG2Q9Y5U4 225 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 CELSR3Q9NYQ7 3312 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 CGB1A6NKQ9 187 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 TNFRSF13BO14836 293 aaPredicted RBP6.49□□□□□ -1.37
VPS11-209ENST00000622309 BCL3P20749 454 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 CD24P25063 80 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 C3AR1Q16581 482 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 RHBDD2Q6NTF9 364 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 PPP1R32Q7Z5V6 425 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 OR8A1Q8NGG7 326 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 ZNF488Q96MN9 340 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 MGST2Q99735 147 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 TM2D2Q9BX73 214 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 TCF19Q9Y242 345 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 LOXL2Q9Y4K0 774 aa6.49□□□□□ -1.37
VPS11-209ENST00000622309 SMIM9A6NGZ8 99 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 PRSS29PA6NIE9 313 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 TMEM150CB9EJG8 249 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 ZNF561-AS1K7EIQ3 104 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 CHEK1O14757 476 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 RSPO1Q2MKA7 263 aaPredicted RBP6.48□□□□□ -1.37
VPS11-209ENST00000622309 AMTNQ6UX39 209 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 TREML4Q6UXN2 200 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 SNRNP40Q96DI7 357 aaKnown RBP6.48□□□□□ -1.37
VPS11-209ENST00000622309 RIF1Q5UIP0 2472 aaKnown RBP6.48□□□□□ -1.37
VPS11-209ENST00000622309 C15orf62A8K5M9 175 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 IGLV2-8P01709 118 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 FXYD2P54710 66 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 MRPS21P82921 87 aaKnown RBP6.48□□□□□ -1.37
VPS11-209ENST00000622309 LRRC75A-AS1Q8N1F1 130 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms