RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 RPL27AP46776 148 aaKnown RBP7.55□□□□□ -1.2
PDPN-212ENST00000621990 PLP1P60201 277 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 FAM231DQ6ZW35 169 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 OR1L6Q8NGR2 347 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 LINC01560Q8TB33 94 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 RNASE7Q9H1E1 156 aaKnown RBP7.55□□□□□ -1.2
PDPN-212ENST00000621990 AMMECR1Q9Y4X0 333 aaPredicted RBP7.55□□□□□ -1.2
PDPN-212ENST00000621990 RELNP78509 3460 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 MALRD1Q5VYJ5 2156 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 LRBAP50851 2863 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 NUPR1O60356 82 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 MT-ND6P03923 174 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 CNTFRP26992 372 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 LINC00310P59036 64 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 DEFA6Q01524 100 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 Q0VG73 95 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 COX19Q49B96 90 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 LINC00305Q7Z4B0 112 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 PPP1R27Q86WC6 154 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 OR8I2Q8N0Y5 310 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 TNFRSF19Q9NS68 423 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 INSIG2Q9Y5U4 225 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 SPTBN2O15020 2390 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 LYNX1G3V0Z9 82 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 PEX7O00628 323 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 IGHV3-48P01763 117 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 LYNX1P0DP58 116 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 RAB4BP61018 213 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 IBA57Q5T440 356 aaKnown RBP7.54□□□□□ -1.2
PDPN-212ENST00000621990 WDR73Q6P4I2 378 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 ST6GALNAC3Q8NDV1 305 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 PERPQ96FX8 193 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 C14orf144Q96I85 54 aa7.54□□□□□ -1.2
PDPN-212ENST00000621990 SRSF8Q9BRL6 282 aaKnown RBP7.54□□□□□ -1.2
PDPN-212ENST00000621990 F11RQ9Y624 299 aaKnown RBP7.54□□□□□ -1.2
PDPN-212ENST00000621990 ANKHD1Q8IWZ3 2542 aaKnown RBP7.54□□□□□ -1.2
PDPN-212ENST00000621990 TACC2O95359 2948 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 PPIAL4CA0A0B4J2A2 164 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 A0A1B0GUS0 222 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 FRMD6-AS1P0C7T7 363 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 PPIAL4GP0DN37 164 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 GRNP28799 593 aaKnown RBP7.53□□□□□ -1.2
PDPN-212ENST00000621990 RPL19P84098 196 aaKnown RBP7.53□□□□□ -1.2
PDPN-212ENST00000621990 TNXAQ16473 311 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 IQCJQ1A5X6 159 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 HCP5Q6MZN7 132 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 ZNF664Q8N3J9 261 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 MBD6Q96DN6 1003 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 SMIM12Q96EX1 92 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 MISP3Q96FF7 219 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 NOL4LQ96MY1 436 aaPredicted RBP7.53□□□□□ -1.2
PDPN-212ENST00000621990 KLF12Q9Y4X4 402 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 PLXNB1O43157 2135 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 A6NJY4 79 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 A8MWP6 167 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 FCN1O00602 326 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 IER3P46695 156 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 UCNP55089 124 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 DLX1P56177 255 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 TMEM95Q3KNT9 176 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 TMEM136Q6ZRR5 245 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 C22orf15Q8WYQ4 148 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 C7orf69Q9H7B7 122 aa7.53□□□□□ -1.2
PDPN-212ENST00000621990 GRIFINA4D1Z8 144 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 FAM90A27PA6NNH2 459 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 SNURFLB1AK76 121 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 CRISP2P16562 243 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 PAFAH1B2P68402 229 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 TMEM183BQ1AE95 376 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 CMTM2Q8TAZ6 248 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 LINC00479Q96M42 142 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 HRNRQ86YZ3 2850 aaPredicted RBP7.52□□□□□ -1.21
PDPN-212ENST00000621990 PTPRZ1P23471 2315 aaPredicted RBP7.52□□□□□ -1.21
PDPN-212ENST00000621990 MOSP00540 346 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 GP9P14770 177 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 FXYD3Q14802 87 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 RASL11AQ6T310 242 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 REC114Q7Z4M0 266 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 OR8B3Q8NGG8 313 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 WIPF2Q8TF74 440 aaPredicted RBP7.52□□□□□ -1.21
PDPN-212ENST00000621990 RPEQ96AT9 228 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 OR8B2Q96RD0 313 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 PRO1933Q9H354 126 aa7.52□□□□□ -1.21
PDPN-212ENST00000621990 HYPMO75409 117 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 LIPFP07098 398 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 RANP62826 216 aaKnown RBP7.51□□□□□ -1.21
PDPN-212ENST00000621990 ADORA2A-AS1P86434 159 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 OR11H6Q8NGC7 330 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 IZUMO1RA6ND01 250 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 I3L2K1 104 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 CCL21O00585 134 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 AMY1AP04745 511 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 MGST1P10620 155 aaKnown RBP7.51□□□□□ -1.21
PDPN-212ENST00000621990 ORM2P19652 201 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 KLRB1Q12918 225 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 CDSNQ15517 529 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 OR10J3Q5JRS4 329 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 LDLRAD2Q5SZI1 272 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 TPTE2P1Q5T6R2 138 aa7.51□□□□□ -1.21
PDPN-212ENST00000621990 C11orf71Q6IPW1 123 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms