RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 TIMP3P35625 211 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 OR9G1Q8NH87 305 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 KLF14Q8TD94 323 aaPredicted RBP8.27□□□□□ -1.09
COL4A6-210ENST00000621266 REG4Q9BYZ8 158 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 FABP5P3A8MUU1 101 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 D6R8Y8 96 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 CD5LO43866 347 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 TRACP01848 142 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 TRGV3P03979 118 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 SCN10AQ9Y5Y9 1956 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 PSME4Q14997 1843 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 TIAF1O95411 115 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 IFITM1P13164 125 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 BOD1L2Q8IYS8 172 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 CTSBP07858 339 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 TSKUQ8WUA8 353 aa8.27□□□□□ -1.09
COL4A6-210ENST00000621266 ZNF236Q9UL36 1845 aa8.26□□□□□ -1.09
COL4A6-210ENST00000621266 A8MWP6 167 aa8.26□□□□□ -1.09
COL4A6-210ENST00000621266 GGTLC1Q9BX51 225 aa8.26□□□□□ -1.09
COL4A6-210ENST00000621266 APC2O95996 2303 aa8.26□□□□□ -1.09
COL4A6-210ENST00000621266 CLEC19AQ6UXS0 136 aa8.26□□□□□ -1.09
COL4A6-210ENST00000621266 BMPERQ8N8U9 685 aa8.26□□□□□ -1.09
COL4A6-210ENST00000621266 FBXL7Q9UJT9 491 aa8.26□□□□□ -1.09
COL4A6-210ENST00000621266 POLR3KQ9Y2Y1 108 aaPredicted RBP8.26□□□□□ -1.09
COL4A6-210ENST00000621266 HTN3P15516 51 aa8.26□□□□□ -1.09
COL4A6-210ENST00000621266 KLF17Q5JT82 389 aaPredicted RBP8.26□□□□□ -1.09
COL4A6-210ENST00000621266 SNHG12Q9BXW3 62 aa8.26□□□□□ -1.09
COL4A6-210ENST00000621266 TMEM242Q9NWH2 141 aa8.26□□□□□ -1.09
COL4A6-210ENST00000621266 LOC285556D6RIA3 1793 aa8.26□□□□□ -1.09
COL4A6-210ENST00000621266 PDLIM4P50479 330 aa8.26□□□□□ -1.09
COL4A6-210ENST00000621266 FAM214BQ7L5A3 538 aa8.26□□□□□ -1.09
COL4A6-210ENST00000621266 OR5P3Q8WZ94 311 aa8.26□□□□□ -1.09
COL4A6-210ENST00000621266 C12orf77C9JDV5 145 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 PF4P02776 101 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 CDKN1AP38936 164 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 PPP1R27Q86WC6 154 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 CHAC1Q9BUX1 264 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 SRXN1Q9BYN0 137 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 TRGV2A0A075B6R0 118 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 PAX1P15863 534 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 C1orf43Q9BWL3 253 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 PATJQ8NI35 1801 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 UNC13CQ8NB66 2214 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 SYS1-DBNDD2H3BUS1 97 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 PAX4O43316 350 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 SMIM10L1P0DMW3 83 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 ZNF138P52744 262 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 TMEM86BQ8N661 226 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 SMIM10Q96HG1 83 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 PSG8Q9UQ74 426 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 AHRRA9YTQ3 701 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 TM2D1Q9BX74 207 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 SMPXQ9UHP9 88 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 COX6A1P12074 109 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 ATP5IP56385 69 aaPredicted RBP8.25□□□□□ -1.09
COL4A6-210ENST00000621266 SHISA5Q8N114 240 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 DCTN5Q9BTE1 182 aa8.25□□□□□ -1.09
COL4A6-210ENST00000621266 TPRP12270 2363 aaKnown RBP8.25□□□□□ -1.09
COL4A6-210ENST00000621266 A0A1W2PRX2 142 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 H3BMM0 161 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 AZU1P20160 251 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 GNLYP22749 145 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 UBE2WQ96B02 151 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 MPZP25189 248 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 MORN3Q6PF18 240 aaPredicted RBP8.24□□□□□ -1.09
COL4A6-210ENST00000621266 ZNF114Q8NC26 417 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 RFNGQ9Y644 331 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 CENPVQ7Z7K6 275 aaPredicted RBP8.24□□□□□ -1.09
COL4A6-210ENST00000621266 JPT2Q9H910 190 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 EFNB3Q15768 340 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 SBF1O95248 1867 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 C4orf51C9J302 202 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 RAMP3O60896 148 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 COX5BP10606 129 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 ASCL2Q99929 193 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 ZNF703Q9H7S9 590 aaPredicted RBP8.24□□□□□ -1.09
COL4A6-210ENST00000621266 C21orf62Q9NYP8 219 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 FOXH1O75593 365 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 PPBPP02775 128 aa8.24□□□□□ -1.09
COL4A6-210ENST00000621266 AHCTF1Q8WYP5 2266 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 ADARB2-AS1A8MUL3 147 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 IGKV1D-33P01593 117 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 IGKV1-33P01594 117 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 OR13A1Q8NGR1 328 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 TCF15Q12870 199 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 PCOLCEQ15113 449 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 RNF115Q9Y4L5 304 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 CDK2AP2O75956 126 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 ZNF688P0C7X2 276 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 STPG4Q8N801 248 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 ZNF319Q9P2F9 582 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 IGKV1D-13A0A0B4J2D9 117 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 IGKV1-13P0DP09 117 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 NABP1Q96AH0 204 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 SIGLEC12Q96PQ1 595 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 IGHMP01871 453 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 IGLV3-21P80748 117 aaPredicted RBP8.23□□□□□ -1.09
COL4A6-210ENST00000621266 FAM201AQ5SY85 155 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 CTHRC1Q96CG8 243 aa8.23□□□□□ -1.09
COL4A6-210ENST00000621266 TCRAP04437 139 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms