RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 AREGP15514 252 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 CDKN1BP46527 198 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 PRSS8Q16651 343 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 PPP1R27Q86WC6 154 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 SIGLEC9Q9Y336 463 aa7.98□□□□□ -1.13
VTA1-205ENST00000620996 PMS2P11Q13670 270 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 C2orf83Q53S99 150 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 RPUSD4Q96CM3 377 aaKnown RBP7.97□□□□□ -1.13
VTA1-205ENST00000620996 NIPSNAP3BQ9BS92 247 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 ALKBH7Q9BT30 221 aaPredicted RBP7.97□□□□□ -1.13
VTA1-205ENST00000620996 KCNIP2Q9NS61 270 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 DOPEY1Q5JWR5 2465 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 TRAV1-1A0A0B4J248 108 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 H3BQ15 152 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 FCN1O00602 326 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 PAGE4O60829 102 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 HSPB1P04792 205 aaKnown RBP7.97□□□□□ -1.13
VTA1-205ENST00000620996 ERVFC1-1P60608 527 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 SLC35E3Q7Z769 313 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 CENPVQ7Z7K6 275 aaPredicted RBP7.97□□□□□ -1.13
VTA1-205ENST00000620996 TEX45Q8NA69 505 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 FAM168AQ92567 244 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 MALSU1Q96EH3 234 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 P2RX4Q99571 388 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 FAM103A1Q9BTL3 118 aaKnown RBP7.97□□□□□ -1.13
VTA1-205ENST00000620996 VAX2Q9UIW0 290 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 ELOA3CA0A087WX78 387 aaPredicted RBP7.97□□□□□ -1.13
VTA1-205ENST00000620996 VENTXO95231 258 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 RIPPLY3P57055 190 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 SPATA31B1PQ5VZV4 182 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 OR5T1Q8NG75 326 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 PIMREGQ9BSJ6 248 aa7.97□□□□□ -1.13
VTA1-205ENST00000620996 NAV3Q8IVL0 2385 aa7.96□□□□□ -1.13
VTA1-205ENST00000620996 A0A1B0GW64 132 aa7.96□□□□□ -1.13
VTA1-205ENST00000620996 CGB1A6NKQ9 187 aa7.96□□□□□ -1.13
VTA1-205ENST00000620996 ARL14EPLP0DKL9 152 aa7.96□□□□□ -1.13
VTA1-205ENST00000620996 HOXB4P17483 251 aaPredicted RBP7.96□□□□□ -1.13
VTA1-205ENST00000620996 BRS3P32247 399 aa7.96□□□□□ -1.13
VTA1-205ENST00000620996 CD69Q07108 199 aa7.96□□□□□ -1.13
VTA1-205ENST00000620996 FAM78BQ5VT40 261 aa7.96□□□□□ -1.13
VTA1-205ENST00000620996 ZNF843Q8N446 348 aa7.96□□□□□ -1.13
VTA1-205ENST00000620996 OR11H6Q8NGC7 330 aa7.96□□□□□ -1.13
VTA1-205ENST00000620996 NPIPB3Q92617 1050 aa7.96□□□□□ -1.13
VTA1-205ENST00000620996 TRAV34A0A0B4J273 112 aa7.96□□□□□ -1.14
VTA1-205ENST00000620996 IGHV2-70DA0A0C4DH43 119 aa7.96□□□□□ -1.14
VTA1-205ENST00000620996 ELOBQ15370 118 aa7.96□□□□□ -1.14
VTA1-205ENST00000620996 C1QL4Q86Z23 238 aa7.96□□□□□ -1.14
VTA1-205ENST00000620996 PAM16Q9Y3D7 125 aa7.96□□□□□ -1.14
VTA1-205ENST00000620996 SELENOKQ9Y6D0 94 aa7.96□□□□□ -1.14
VTA1-205ENST00000620996 RND2P52198 227 aa7.95□□□□□ -1.14
VTA1-205ENST00000620996 SSBP2P81877 361 aaPredicted RBP7.95□□□□□ -1.14
VTA1-205ENST00000620996 MEF2BQ02080 365 aaPredicted RBP7.95□□□□□ -1.14
VTA1-205ENST00000620996 CFAP161Q6P656 301 aa7.95□□□□□ -1.14
VTA1-205ENST00000620996 SRSF12Q8WXF0 261 aaKnown RBP7.95□□□□□ -1.14
VTA1-205ENST00000620996 CRYBG3Q68DQ2 2970 aa7.95□□□□□ -1.14
VTA1-205ENST00000620996 LY6LH3BQJ8 138 aa7.95□□□□□ -1.14
VTA1-205ENST00000620996 MOSP00540 346 aa7.95□□□□□ -1.14
VTA1-205ENST00000620996 COMPP49747 757 aaPredicted RBP7.95□□□□□ -1.14
VTA1-205ENST00000620996 RHOBP62745 196 aa7.95□□□□□ -1.14
VTA1-205ENST00000620996 TMEM144Q7Z5S9 345 aa7.95□□□□□ -1.14
VTA1-205ENST00000620996 DYNAPQ8N1N2 210 aa7.95□□□□□ -1.14
VTA1-205ENST00000620996 C1orf159Q96HA4 380 aa7.95□□□□□ -1.14
VTA1-205ENST00000620996 SMDT1Q9H4I9 107 aa7.95□□□□□ -1.14
VTA1-205ENST00000620996 SEPSECSQ9HD40 501 aaKnown RBP7.95□□□□□ -1.14
VTA1-205ENST00000620996 LSM4Q9Y4Z0 139 aaKnown RBP7.95□□□□□ -1.14
VTA1-205ENST00000620996 LRRK2Q5S007 2527 aa7.95□□□□□ -1.14
VTA1-205ENST00000620996 NBR2O15453 112 aa7.95□□□□□ -1.14
VTA1-205ENST00000620996 COX6B1P14854 86 aa7.95□□□□□ -1.14
VTA1-205ENST00000620996 PAX1P15863 534 aa7.95□□□□□ -1.14
VTA1-205ENST00000620996 LMO4P61968 165 aa7.95□□□□□ -1.14
VTA1-205ENST00000620996 EAF1Q96JC9 268 aaPredicted RBP7.95□□□□□ -1.14
VTA1-205ENST00000620996 SVEP1Q4LDE5 3571 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 IGKV1OR2-108A0A075B7D4 117 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 C11orf94C9JXX5 98 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 OVOL3O00110 214 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 OR7C2O60412 319 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 FOXH1O75593 365 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 CCDC144NLQ6NUI1 221 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 MIR17HGQ75NE6 70 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 NECAP1Q8NC96 275 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 OR4C5Q8NGB2 326 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 FAM210BQ96KR6 192 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 RNF2Q99496 336 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 SMIM7Q9BQ49 75 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 FNDC4Q9H6D8 234 aaPredicted RBP7.94□□□□□ -1.14
VTA1-205ENST00000620996 IGHV4-61A0A0C4DH41 118 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 IGLC7A0M8Q6 106 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 XKRY2A2RUG3 117 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 MT-CO2P00403 227 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 ADIRFQ15847 76 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 TDRG1Q3Y452 100 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 FBLN7Q53RD9 439 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 TVP23CQ96ET8 276 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 SLC25A33Q9BSK2 321 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 MANBALQ9NQG1 85 aa7.94□□□□□ -1.14
VTA1-205ENST00000620996 CENPEQ02224 2701 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 ODF3BA8MYP8 253 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 M0QZK8 103 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 OR5G3P0C626 314 aa7.93□□□□□ -1.14
VTA1-205ENST00000620996 ATP5G3P48201 142 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms