RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 FAM168AQ92567 244 aa5.74□□□□□ -1.49
NEDD9-216ENST00000620854 ZC2HC1AQ96GY0 325 aa5.74□□□□□ -1.49
NEDD9-216ENST00000620854 COQ2Q96H96 371 aa5.74□□□□□ -1.49
NEDD9-216ENST00000620854 TRBV6-6A0A0A6YYG2 114 aa5.74□□□□□ -1.49
NEDD9-216ENST00000620854 M0QZ24 198 aa5.74□□□□□ -1.49
NEDD9-216ENST00000620854 CORTO00230 105 aa5.74□□□□□ -1.49
NEDD9-216ENST00000620854 ISLRO14498 428 aa5.74□□□□□ -1.49
NEDD9-216ENST00000620854 SRSF6Q13247 344 aaKnown RBP5.74□□□□□ -1.49
NEDD9-216ENST00000620854 PIP4P1Q86T03 277 aa5.74□□□□□ -1.49
NEDD9-216ENST00000620854 SLC25A10Q9UBX3 287 aaPredicted RBP5.74□□□□□ -1.49
NEDD9-216ENST00000620854 UQCR10Q9UDW1 63 aa5.74□□□□□ -1.49
NEDD9-216ENST00000620854 NCOR2Q9Y618 2525 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 SH2D7A6NKC9 451 aaPredicted RBP5.73□□□□□ -1.49
NEDD9-216ENST00000620854 LINC00614P0C842 121 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 SMIM17P0DL12 118 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 PRRX1P54821 245 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 COX19Q49B96 90 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 OR4B1Q8NGF8 309 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 TMEM45BQ96B21 275 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 PERPQ96FX8 193 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 SFXN3Q9BWM7 321 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 CLEC7AQ9BXN2 247 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 LINC00470Q9BZP3 86 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 MBNL3Q9NUK0 354 aaKnown RBP5.73□□□□□ -1.49
NEDD9-216ENST00000620854 CALYQ9NYX4 217 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 PROP1O75360 226 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 IGLC2P0DOY2 106 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 IGLC3P0DOY3 106 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 CLDN18P56856 261 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 HSPE1P61604 102 aaKnown RBP5.73□□□□□ -1.49
NEDD9-216ENST00000620854 RPL8P62917 257 aaKnown RBP5.73□□□□□ -1.49
NEDD9-216ENST00000620854 Q6ZT83 130 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 TMEM116Q8NCL8 245 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 PGLYRP4Q96LB8 373 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 PARD6GQ9BYG4 376 aaPredicted RBP5.73□□□□□ -1.49
NEDD9-216ENST00000620854 MPDU1O75352 247 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 HTN1P15515 57 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 RPL7P18124 248 aaKnown RBP5.73□□□□□ -1.49
NEDD9-216ENST00000620854 GAGE1Q13065 139 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 BPIFA4PQ86YQ2 179 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 NPIPB3Q92617 1050 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 RAB37Q96AX2 223 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 NABP2Q9BQ15 211 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 PKIBQ9C010 78 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 AMMECR1Q9Y4X0 333 aaPredicted RBP5.73□□□□□ -1.49
NEDD9-216ENST00000620854 HILPDAQ9Y5L2 63 aa5.73□□□□□ -1.49
NEDD9-216ENST00000620854 FAM208BQ5VWN6 2430 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 A8MWL6 223 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 SNAI2O43623 268 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 SELENOTP62341 195 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 SLAQ13239 276 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 OR4A47Q6IF82 309 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 ZNF738Q8NE65 137 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 PMCHL2Q9BQD1 86 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 MSRB2Q9Y3D2 182 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 V9GYV3 84 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 ACACBO00763 2458 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 TRAV5A0A0B4J249 113 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 CGB1A6NKQ9 187 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 ZNF324O75467 553 aaPredicted RBP5.72□□□□□ -1.49
NEDD9-216ENST00000620854 LEPROTL1O95214 131 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 RPL27AP46776 148 aaKnown RBP5.72□□□□□ -1.49
NEDD9-216ENST00000620854 RIGQ13278 110 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 LEMD1Q68G75 181 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 THYN1Q9P016 225 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 MUC21A0A0G2JKD1 596 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 MUC21A0A140T8X8 626 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 NPIPB11E5RHQ5 1161 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 MOSP00540 346 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 CA2P00918 260 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 ZNF146Q15072 292 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 TMEM177Q53S58 311 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 MUC21Q5SSG8 566 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 SCGB1D4Q6XE38 83 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 OR8B3Q8NGG8 313 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 Q8TCH9 128 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 TSKUQ8WUA8 353 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 OR8B2Q96RD0 313 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 TNFRSF19Q9NS68 423 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 MYO18BQ8IUG5 2567 aa5.72□□□□□ -1.49
NEDD9-216ENST00000620854 ZGRF1Q86YA3 2104 aa5.71□□□□□ -1.49
NEDD9-216ENST00000620854 PPIAL4EA0A075B759 164 aa5.71□□□□□ -1.49
NEDD9-216ENST00000620854 OR4C46A6NHA9 309 aa5.71□□□□□ -1.49
NEDD9-216ENST00000620854 PPIAL4DF5H284 164 aa5.71□□□□□ -1.49
NEDD9-216ENST00000620854 HLA-DQA1P01909 254 aa5.71□□□□□ -1.49
NEDD9-216ENST00000620854 MT-ND6P03923 174 aa5.71□□□□□ -1.49
NEDD9-216ENST00000620854 C8orf88P0DMB2 117 aa5.71□□□□□ -1.49
NEDD9-216ENST00000620854 PPIAL4FP0DN26 164 aa5.71□□□□□ -1.49
NEDD9-216ENST00000620854 TSPOP30536 169 aa5.71□□□□□ -1.49
NEDD9-216ENST00000620854 DUTP33316 252 aaKnown RBP5.71□□□□□ -1.49
NEDD9-216ENST00000620854 ZNF134P52741 427 aa5.71□□□□□ -1.49
NEDD9-216ENST00000620854 KCNS1Q96KK3 526 aa5.71□□□□□ -1.49
NEDD9-216ENST00000620854 ZNRD1Q9P1U0 126 aa5.71□□□□□ -1.49
NEDD9-216ENST00000620854 CDC42EP3Q9UKI2 254 aa5.71□□□□□ -1.49
NEDD9-216ENST00000620854 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.71□□□□□ -1.5
NEDD9-216ENST00000620854 P0C879 139 aa5.71□□□□□ -1.5
NEDD9-216ENST00000620854 ERVK11-1P61568 191 aa5.71□□□□□ -1.5
NEDD9-216ENST00000620854 PRB3Q04118 309 aaPredicted RBP5.71□□□□□ -1.5
NEDD9-216ENST00000620854 KIR3DL3Q8N743 410 aa5.71□□□□□ -1.5
NEDD9-216ENST00000620854 Q8N976 141 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms