RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 FOXL1Q12952 345 aa17.11■□□□□ 0.33
SGMS1-210ENST00000619438 TMEM241Q24JQ0 296 aa17.11■□□□□ 0.33
SGMS1-210ENST00000619438 VMA21Q3ZAQ7 101 aa17.11■□□□□ 0.33
SGMS1-210ENST00000619438 STPG3Q8N7X2 389 aa17.11■□□□□ 0.33
SGMS1-210ENST00000619438 SLC45A2Q9UMX9 530 aa17.11■□□□□ 0.33
SGMS1-210ENST00000619438 TSPAN9O75954 239 aa17.1■□□□□ 0.33
SGMS1-210ENST00000619438 DEFA4P12838 97 aa17.1■□□□□ 0.33
SGMS1-210ENST00000619438 ELOBQ15370 118 aa17.1■□□□□ 0.33
SGMS1-210ENST00000619438 HLA-DRB5Q30154 266 aa17.1■□□□□ 0.33
SGMS1-210ENST00000619438 OR4F5Q8NH21 305 aa17.1■□□□□ 0.33
SGMS1-210ENST00000619438 GATAD1Q8WUU5 269 aa17.1■□□□□ 0.33
SGMS1-210ENST00000619438 OR4F4Q96R69 305 aa17.1■□□□□ 0.33
SGMS1-210ENST00000619438 SAV1Q9H4B6 383 aaPredicted RBP17.1■□□□□ 0.33
SGMS1-210ENST00000619438 RHOBP62745 196 aa17.1■□□□□ 0.33
SGMS1-210ENST00000619438 CD69Q07108 199 aa17.1■□□□□ 0.33
SGMS1-210ENST00000619438 C3orf56Q8N813 242 aa17.1■□□□□ 0.33
SGMS1-210ENST00000619438 SLC35E1Q96K37 410 aa17.1■□□□□ 0.33
SGMS1-210ENST00000619438 CLEC7AQ9BXN2 247 aa17.1■□□□□ 0.33
SGMS1-210ENST00000619438 PARLQ9H300 379 aa17.1■□□□□ 0.33
SGMS1-210ENST00000619438 C11orf94C9JXX5 98 aa17.09■□□□□ 0.33
SGMS1-210ENST00000619438 OPN1MWP04001 364 aa17.09■□□□□ 0.33
SGMS1-210ENST00000619438 LINC00869P0C866 280 aa17.09■□□□□ 0.33
SGMS1-210ENST00000619438 OPN1MW2P0DN77 364 aa17.09■□□□□ 0.33
SGMS1-210ENST00000619438 OPN1MW3P0DN78 364 aa17.09■□□□□ 0.33
SGMS1-210ENST00000619438 IQCF2Q8IXL9 164 aa17.09■□□□□ 0.33
SGMS1-210ENST00000619438 TEX45Q8NA69 505 aa17.09■□□□□ 0.33
SGMS1-210ENST00000619438 F6UZH7 168 aa17.08■□□□□ 0.32
SGMS1-210ENST00000619438 COMPP49747 757 aaPredicted RBP17.08■□□□□ 0.32
SGMS1-210ENST00000619438 FBN3Q75N90 2809 aa17.08■□□□□ 0.32
SGMS1-210ENST00000619438 OR10W1Q8NGF6 305 aa17.08■□□□□ 0.32
SGMS1-210ENST00000619438 RNASEH2CQ8TDP1 164 aaKnown RBP17.08■□□□□ 0.32
SGMS1-210ENST00000619438 ABHD5Q8WTS1 349 aa17.08■□□□□ 0.32
SGMS1-210ENST00000619438 ZNF430Q9H8G1 570 aaPredicted RBP17.08■□□□□ 0.32
SGMS1-210ENST00000619438 TNCP24821 2201 aa17.08■□□□□ 0.32
SGMS1-210ENST00000619438 CGB1A6NKQ9 187 aa17.07■□□□□ 0.32
SGMS1-210ENST00000619438 BUB1B-PAK6H3BSN5 160 aa17.07■□□□□ 0.32
SGMS1-210ENST00000619438 HAX1O00165 279 aa17.07■□□□□ 0.32
SGMS1-210ENST00000619438 ARL14EPLP0DKL9 152 aa17.07■□□□□ 0.32
SGMS1-210ENST00000619438 GAMTQ14353 236 aa17.07■□□□□ 0.32
SGMS1-210ENST00000619438 ZFP82Q8N141 532 aa17.07■□□□□ 0.32
SGMS1-210ENST00000619438 OR11H6Q8NGC7 330 aa17.07■□□□□ 0.32
SGMS1-210ENST00000619438 Q8WTZ3 238 aa17.07■□□□□ 0.32
SGMS1-210ENST00000619438 SSX3Q99909 188 aa17.07■□□□□ 0.32
SGMS1-210ENST00000619438 AMMECR1Q9Y4X0 333 aaPredicted RBP17.07■□□□□ 0.32
SGMS1-210ENST00000619438 MRGPRG-AS1Q2M3A8 158 aa17.07■□□□□ 0.32
SGMS1-210ENST00000619438 LHFPL4Q7Z7J7 247 aa17.07■□□□□ 0.32
SGMS1-210ENST00000619438 OR5R1Q8NH85 324 aa17.07■□□□□ 0.32
SGMS1-210ENST00000619438 C2CD4CQ8TF44 421 aa17.07■□□□□ 0.32
SGMS1-210ENST00000619438 RPUSD4Q96CM3 377 aaKnown RBP17.07■□□□□ 0.32
SGMS1-210ENST00000619438 MEGF9Q9H1U4 602 aa17.07■□□□□ 0.32
SGMS1-210ENST00000619438 SUB1P53999 127 aaKnown RBP eCLIP17.06■□□□□ 0.32
SGMS1-210ENST00000619438 TBL2Q9Y4P3 447 aaKnown RBP17.06■□□□□ 0.32
SGMS1-210ENST00000619438 ARL2-SNX15V9GYD0 113 aa17.06■□□□□ 0.32
SGMS1-210ENST00000619438 IGKV1OR2-108A0A075B7D4 117 aa17.05■□□□□ 0.32
SGMS1-210ENST00000619438 E7EUB6 86 aa17.05■□□□□ 0.32
SGMS1-210ENST00000619438 H3BUX3 64 aa17.05■□□□□ 0.32
SGMS1-210ENST00000619438 CLN5O75503 358 aa17.05■□□□□ 0.32
SGMS1-210ENST00000619438 CRYGBP07316 175 aa17.05■□□□□ 0.32
SGMS1-210ENST00000619438 RPL23P62829 140 aaKnown RBP17.05■□□□□ 0.32
SGMS1-210ENST00000619438 SSX2Q16385 188 aa17.05■□□□□ 0.32
SGMS1-210ENST00000619438 PVRIGQ6DKI7 326 aa17.05■□□□□ 0.32
SGMS1-210ENST00000619438 MRPL41Q8IXM3 137 aaKnown RBP17.05■□□□□ 0.32
SGMS1-210ENST00000619438 C5orf52A6NGY3 159 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 SLC25A17O43808 307 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 MT-CO2P00403 227 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 NPPCP23582 126 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 GCHFRP30047 84 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 WT1-ASQ06250 92 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 ZNF674Q2M3X9 581 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 ZNF343Q6P1L6 599 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 SLC16A13Q7RTY0 426 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 MMD2Q8IY49 270 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 RNF5Q99942 180 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 SEPSECSQ9HD40 501 aaKnown RBP17.04■□□□□ 0.32
SGMS1-210ENST00000619438 DOK5Q9P104 306 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 VPREB3Q9UKI3 123 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 IGHV1-3A0A0C4DH29 117 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 ODF3BA8MYP8 253 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 LY6LH3BQJ8 138 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 TGOLN2O43493 480 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 CXCL1P09341 107 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 RPL15P61313 204 aaKnown RBP17.04■□□□□ 0.32
SGMS1-210ENST00000619438 ADIRFQ15847 76 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 OR4P4Q8NGL7 312 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 AJUBAQ96IF1 538 aa17.04■□□□□ 0.32
SGMS1-210ENST00000619438 TRBV24-1A0A075B6N3 115 aa17.03■□□□□ 0.32
SGMS1-210ENST00000619438 LY6EQ16553 131 aa17.03■□□□□ 0.32
SGMS1-210ENST00000619438 PRSS8Q16651 343 aa17.03■□□□□ 0.32
SGMS1-210ENST00000619438 ZNF114Q8NC26 417 aa17.03■□□□□ 0.32
SGMS1-210ENST00000619438 RITA1Q96K30 269 aa17.03■□□□□ 0.32
SGMS1-210ENST00000619438 C1RLQ9NZP8 487 aa17.03■□□□□ 0.32
SGMS1-210ENST00000619438 FUT9Q9Y231 359 aa17.03■□□□□ 0.32
SGMS1-210ENST00000619438 HILPDAQ9Y5L2 63 aa17.03■□□□□ 0.32
SGMS1-210ENST00000619438 HTR1DP28221 377 aa17.02■□□□□ 0.32
SGMS1-210ENST00000619438 OR10J1P30954 320 aa17.02■□□□□ 0.32
SGMS1-210ENST00000619438 ATP5G3P48201 142 aa17.02■□□□□ 0.32
SGMS1-210ENST00000619438 GNB1P62873 340 aa17.02■□□□□ 0.32
SGMS1-210ENST00000619438 CST9LP1Q5W188 147 aa17.02■□□□□ 0.32
SGMS1-210ENST00000619438 MOB3BQ86TA1 216 aa17.02■□□□□ 0.32
SGMS1-210ENST00000619438 UBE2CO00762 179 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms