RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 TCF24Q7RTU0 167 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 TRAPPC6BQ86SZ2 158 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 AKAP14Q86UN6 197 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 FAM24BQ8N5W8 94 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 WFDC11Q8NEX6 87 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 GRPEL2Q8TAA5 225 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 DYDC1Q8WWB3 177 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 AQP3Q92482 292 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 ZHX1-C8orf76Q96EF9 292 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 CARD19Q96LW7 228 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 TXNDC17Q9BRA2 123 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 DOHHQ9BU89 302 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 IMUPQ9GZP8 106 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 CXCL16Q9H2A7 254 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 MIXL1Q9H2W2 232 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 RNF122Q9H9V4 155 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 CKLFQ9UBR5 152 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 NDUFAF1Q9Y375 327 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 TOPBP1Q92547 1522 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 DOCK6Q96HP0 2047 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 SCN9AQ15858 1988 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 ADAMTS7Q9UKP4 1686 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 RTEL1-TNFRSF6BF6WH68 1400 aa0.97□□□□□ -2.25
TARDBP-220ENST00000618606 TONSLQ96HA7 1378 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 KDM5BQ9UGL1 1544 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 COL4A2P08572 1712 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 UNC13AQ9UPW8 1703 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 PTPRSQ13332 1948 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 IGLV3-9A0A075B6K5 115 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 A0A087X0T9 212 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 TRAV3A0A0B4J244 114 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 DUXBA0A1W2PPF3 345 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 GNG14A0A1W2PPG7 69 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 ODAMA1E959 279 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 MAP1LC3B2A6NCE7 125 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 TMEM212A6NML5 194 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 RIIAD1A6NNX1 92 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 IBA57-AS1B1ANH7 110 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 LY6LH3BQJ8 138 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 PLXNB1O43157 2135 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 PMP2P02689 132 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 CRHP06850 196 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 CTSDP07339 412 aaPredicted RBP0.96□□□□□ -2.26
TARDBP-220ENST00000618606 NFYAP23511 347 aaPredicted RBP0.96□□□□□ -2.26
TARDBP-220ENST00000618606 NFYBP25208 207 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 SRP14P37108 136 aaKnown RBP0.96□□□□□ -2.26
TARDBP-220ENST00000618606 YPEL3P61236 119 aaPredicted RBP0.96□□□□□ -2.26
TARDBP-220ENST00000618606 EIF5AP63241 154 aaKnown RBP0.96□□□□□ -2.26
TARDBP-220ENST00000618606 MSMO1Q15800 293 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 DCUN1D2Q6PH85 259 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 SOSTDC1Q6X4U4 206 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 AAED1Q7RTV5 226 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 TAC4Q86UU9 113 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 TMEM86AQ8N2M4 240 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 C3orf56Q8N813 242 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 OR4E2Q8NGC2 313 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 OR8B3Q8NGG8 313 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 OR13D1Q8NGV5 346 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 RNASE11Q8TAA1 199 aaKnown RBP0.96□□□□□ -2.26
TARDBP-220ENST00000618606 RMND5BQ96G75 393 aaPredicted RBP0.96□□□□□ -2.26
TARDBP-220ENST00000618606 SERPINI1Q99574 410 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 HIST1H2BLQ99880 126 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 MAP1LC3BQ9GZQ8 125 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 CENPHQ9H3R5 247 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 MED11Q9P086 117 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 FMN1Q68DA7 1419 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 KIF13BQ9NQT8 1826 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 DOCK3Q8IZD9 2030 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 SYNMO15061 1565 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 ROCK1Q13464 1354 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 ANKRD30AQ9BXX3 1397 aa0.96□□□□□ -2.26
TARDBP-220ENST00000618606 CCDC88AQ3V6T2 1871 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 ZNF106Q9H2Y7 1883 aaKnown RBP0.95□□□□□ -2.26
TARDBP-220ENST00000618606 A0A0D9SG52 128 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 A0A1W2PRE2 83 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 TMEM256-PLSCR3K7ERE1 68 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 AIPO00170 330 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 CXCL1P09341 107 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 DYNLT1P63172 113 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 RHOGP84095 191 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 TMEM78Q5T7P6 136 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 Q6ZRN7 208 aaPredicted RBP0.95□□□□□ -2.26
TARDBP-220ENST00000618606 C7orf65Q6ZTY9 151 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 DHFR2Q86XF0 187 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 PDZD9Q8IXQ8 264 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 GPX7Q96SL4 187 aaPredicted RBP0.95□□□□□ -2.26
TARDBP-220ENST00000618606 GPER1Q99527 375 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 MRPL32Q9BYC8 188 aaKnown RBP0.95□□□□□ -2.26
TARDBP-220ENST00000618606 OR2J1Q9GZK6 312 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 PBOV1Q9GZY1 135 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 TMEM126AQ9H061 195 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 OR52A1Q9UKL2 312 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 LHFPL6Q9Y693 200 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 MED1Q15648 1581 aaPredicted RBP0.95□□□□□ -2.26
TARDBP-220ENST00000618606 ARHGAP32A7KAX9 2087 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 CPAMD8Q8IZJ3 1885 aa0.95□□□□□ -2.26
TARDBP-220ENST00000618606 GREB1Q4ZG55 1949 aa0.94□□□□□ -2.26
TARDBP-220ENST00000618606 TRAV1-1A0A0B4J248 108 aa0.94□□□□□ -2.26
TARDBP-220ENST00000618606 LOC105371267A0A1B0GV96 52 aa0.94□□□□□ -2.26
TARDBP-220ENST00000618606 SDCBPO00560 298 aaPredicted RBP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms