RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 OR5P3Q8WZ94 311 aa12.69□□□□□ -0.38
COL5A1-208ENST00000618395 BTCP35070 178 aa12.68□□□□□ -0.38
COL5A1-208ENST00000618395 MIR17HGQ75NE6 70 aa12.68□□□□□ -0.38
COL5A1-208ENST00000618395 CFHR5Q9BXR6 569 aa12.68□□□□□ -0.38
COL5A1-208ENST00000618395 CDKN1AP38936 164 aa12.68□□□□□ -0.38
COL5A1-208ENST00000618395 TMEM30BQ3MIR4 351 aa12.68□□□□□ -0.38
COL5A1-208ENST00000618395 FAM27BQ5VT28 67 aa12.68□□□□□ -0.38
COL5A1-208ENST00000618395 NYNRINQ9P2P1 1898 aaKnown RBP12.68□□□□□ -0.38
COL5A1-208ENST00000618395 LCNL1Q6ZST4 164 aa12.68□□□□□ -0.38
COL5A1-208ENST00000618395 PLAC1Q9HBJ0 212 aa12.68□□□□□ -0.38
COL5A1-208ENST00000618395 PAX4O43316 350 aa12.68□□□□□ -0.38
COL5A1-208ENST00000618395 SRD5A1P18405 259 aa12.68□□□□□ -0.38
COL5A1-208ENST00000618395 CCL1P22362 96 aa12.68□□□□□ -0.38
COL5A1-208ENST00000618395 FAM106AQ4KMX7 169 aa12.68□□□□□ -0.38
COL5A1-208ENST00000618395 ASPHD2Q6ICH7 369 aa12.68□□□□□ -0.38
COL5A1-208ENST00000618395 DUX4L9Q6RFH8 374 aaPredicted RBP12.68□□□□□ -0.38
COL5A1-208ENST00000618395 AMN1Q8IY45 258 aa12.67□□□□□ -0.38
COL5A1-208ENST00000618395 DLL3Q9NYJ7 618 aa12.67□□□□□ -0.38
COL5A1-208ENST00000618395 D6R8Y8 96 aa12.67□□□□□ -0.38
COL5A1-208ENST00000618395 FGF11Q92914 225 aa12.67□□□□□ -0.38
COL5A1-208ENST00000618395 PRR32B1ATL7 298 aa12.67□□□□□ -0.38
COL5A1-208ENST00000618395 PRSS53Q2L4Q9 553 aa12.67□□□□□ -0.38
COL5A1-208ENST00000618395 PIN1P1O15428 100 aa12.67□□□□□ -0.38
COL5A1-208ENST00000618395 PGFP49763 221 aa12.67□□□□□ -0.38
COL5A1-208ENST00000618395 LINC01555Q8NAE3 123 aa12.67□□□□□ -0.38
COL5A1-208ENST00000618395 TMEM190Q8WZ59 177 aa12.67□□□□□ -0.38
COL5A1-208ENST00000618395 BRCA1P38398 1863 aaKnown RBP12.67□□□□□ -0.38
COL5A1-208ENST00000618395 PRRT4C9JH25 899 aa12.66□□□□□ -0.38
COL5A1-208ENST00000618395 CELA3AP09093 270 aa12.66□□□□□ -0.38
COL5A1-208ENST00000618395 RNASE4P34096 147 aaKnown RBP12.66□□□□□ -0.38
COL5A1-208ENST00000618395 IL11RAQ14626 422 aa12.66□□□□□ -0.38
COL5A1-208ENST00000618395 WNT2P09544 360 aa12.66□□□□□ -0.38
COL5A1-208ENST00000618395 EEF1AKMT3Q96AZ1 226 aa12.66□□□□□ -0.38
COL5A1-208ENST00000618395 LY75O60449 1722 aa12.66□□□□□ -0.38
COL5A1-208ENST00000618395 A0A0U1RRA0 63 aa12.66□□□□□ -0.38
COL5A1-208ENST00000618395 LDLRAD1Q5T700 205 aa12.66□□□□□ -0.38
COL5A1-208ENST00000618395 C18orf12Q96KH6 178 aa12.66□□□□□ -0.38
COL5A1-208ENST00000618395 TMEM14DPA8MWL7 114 aa12.66□□□□□ -0.38
COL5A1-208ENST00000618395 CACNA1HO95180 2353 aa12.66□□□□□ -0.38
COL5A1-208ENST00000618395 H3BMG7 143 aa12.66□□□□□ -0.38
COL5A1-208ENST00000618395 PEAR1Q5VY43 1037 aaPredicted RBP12.66□□□□□ -0.38
COL5A1-208ENST00000618395 UBR3Q6ZT12 1888 aa12.66□□□□□ -0.38
COL5A1-208ENST00000618395 LINC01551Q86U37 167 aa12.66□□□□□ -0.38
COL5A1-208ENST00000618395 SYNJ2BPP57105 145 aa12.66□□□□□ -0.38
COL5A1-208ENST00000618395 LY6G6FQ5SQ64 297 aa12.66□□□□□ -0.38
COL5A1-208ENST00000618395 CEACAM8P31997 349 aaPredicted RBP12.65□□□□□ -0.38
COL5A1-208ENST00000618395 TICRRQ7Z2Z1 1910 aa12.65□□□□□ -0.38
COL5A1-208ENST00000618395 ATP5G2Q06055 141 aa12.65□□□□□ -0.38
COL5A1-208ENST00000618395 LSM4Q9Y4Z0 139 aaKnown RBP12.65□□□□□ -0.38
COL5A1-208ENST00000618395 LMO7DNF2Z398 122 aa12.65□□□□□ -0.38
COL5A1-208ENST00000618395 EDIL3O43854 480 aa12.65□□□□□ -0.38
COL5A1-208ENST00000618395 OR13A1Q8NGR1 328 aa12.65□□□□□ -0.38
COL5A1-208ENST00000618395 SPXQ9BT56 116 aa12.65□□□□□ -0.38
COL5A1-208ENST00000618395 JPT1Q9UK76 154 aa12.65□□□□□ -0.38
COL5A1-208ENST00000618395 IQCF6A8MYZ5 107 aa12.65□□□□□ -0.38
COL5A1-208ENST00000618395 TCF15Q12870 199 aa12.65□□□□□ -0.38
COL5A1-208ENST00000618395 IFI27L2Q9H2X8 130 aa12.65□□□□□ -0.38
COL5A1-208ENST00000618395 PILRBQ9UKJ0 227 aa12.65□□□□□ -0.38
COL5A1-208ENST00000618395 COL16A1Q07092 1604 aaPredicted RBP12.65□□□□□ -0.38
COL5A1-208ENST00000618395 KNCNA6PVL3 124 aa12.65□□□□□ -0.39
COL5A1-208ENST00000618395 R4GN57 208 aa12.65□□□□□ -0.39
COL5A1-208ENST00000618395 NPIPB13A6NJU9 1138 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 HMGA1P17096 107 aaKnown RBP12.64□□□□□ -0.39
COL5A1-208ENST00000618395 PRADC1Q9BSG0 188 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 LCTP09848 1927 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 ABCA3Q99758 1704 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 GPBAR1Q8TDU6 330 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 PLXNA2O75051 1894 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 NBASA2RRP1 2371 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 IL18BPO95998 194 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 C15orf53Q8NAA6 179 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 MUC4Q99102 2169 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 IGLC2P0DOY2 106 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 IGLC3P0DOY3 106 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 TRAV17A0A0B4J275 112 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 NEGR1Q7Z3B1 354 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 MMP23AO75900 390 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 NUP35Q8NFH5 326 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 DUX5Q96PT3 197 aa12.64□□□□□ -0.39
COL5A1-208ENST00000618395 IGHV1-24A0A0C4DH33 117 aa12.63□□□□□ -0.39
COL5A1-208ENST00000618395 ZC2HC1BQ5TFG8 222 aa12.63□□□□□ -0.39
COL5A1-208ENST00000618395 IDI2-AS1Q9NZ38 188 aa12.63□□□□□ -0.39
COL5A1-208ENST00000618395 A0A1W2PPV9 198 aa12.63□□□□□ -0.39
COL5A1-208ENST00000618395 Q0VG73 95 aa12.63□□□□□ -0.39
COL5A1-208ENST00000618395 TMEM243Q9BU79 118 aa12.63□□□□□ -0.39
COL5A1-208ENST00000618395 CRYBA4P53673 196 aa12.63□□□□□ -0.39
COL5A1-208ENST00000618395 ZNF576Q9H609 170 aa12.63□□□□□ -0.39
COL5A1-208ENST00000618395 IGHV3-72A0A0B4J1Y9 119 aa12.63□□□□□ -0.39
COL5A1-208ENST00000618395 DXOO77932 396 aaKnown RBP12.63□□□□□ -0.39
COL5A1-208ENST00000618395 IGKV3-20P01619 116 aa12.63□□□□□ -0.39
COL5A1-208ENST00000618395 SPATA25Q9BR10 227 aa12.63□□□□□ -0.39
COL5A1-208ENST00000618395 CXCL16Q9H2A7 254 aa12.63□□□□□ -0.39
COL5A1-208ENST00000618395 TNRC6CQ9HCJ0 1690 aaKnown RBP12.62□□□□□ -0.39
COL5A1-208ENST00000618395 IGHV2-26A0A0B4J1V2 119 aa12.62□□□□□ -0.39
COL5A1-208ENST00000618395 ATOX1O00244 68 aa12.62□□□□□ -0.39
COL5A1-208ENST00000618395 C19orf48Q6RUI8 117 aa12.62□□□□□ -0.39
COL5A1-208ENST00000618395 FAM57AQ8TBR7 257 aa12.62□□□□□ -0.39
COL5A1-208ENST00000618395 EFNB3Q15768 340 aa12.62□□□□□ -0.39
COL5A1-208ENST00000618395 DUX3Q96PT4 197 aa12.62□□□□□ -0.39
COL5A1-208ENST00000618395 TM2D1Q9BX74 207 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms