RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 RAI1Q7Z5J4 1906 aaPredicted RBP12.6□□□□□ -0.39
GPN1-212ENST00000616939 CORTO00230 105 aa12.59□□□□□ -0.39
GPN1-212ENST00000616939 MLANAQ16655 118 aa12.59□□□□□ -0.39
GPN1-212ENST00000616939 TMEM177Q53S58 311 aa12.59□□□□□ -0.39
GPN1-212ENST00000616939 MOGAT3Q86VF5 341 aa12.59□□□□□ -0.39
GPN1-212ENST00000616939 PDPNQ86YL7 162 aa12.59□□□□□ -0.39
GPN1-212ENST00000616939 CST9LQ9H4G1 147 aa12.59□□□□□ -0.39
GPN1-212ENST00000616939 CACNA1GO43497 2377 aa12.59□□□□□ -0.39
GPN1-212ENST00000616939 IGKV1D-37A0A075B6S9 117 aa12.58□□□□□ -0.4
GPN1-212ENST00000616939 NUDT3O95989 172 aa12.58□□□□□ -0.4
GPN1-212ENST00000616939 APOA2P02652 100 aa12.58□□□□□ -0.4
GPN1-212ENST00000616939 RBPMS2Q6ZRY4 209 aaKnown RBP12.58□□□□□ -0.4
GPN1-212ENST00000616939 TMEM167AQ8TBQ9 72 aa12.58□□□□□ -0.4
GPN1-212ENST00000616939 PERPQ96FX8 193 aa12.58□□□□□ -0.4
GPN1-212ENST00000616939 WASHC3Q9Y3C0 194 aa12.58□□□□□ -0.4
GPN1-212ENST00000616939 A0A1W2PNU3 283 aaPredicted RBP12.58□□□□□ -0.4
GPN1-212ENST00000616939 LTAP01374 205 aa12.58□□□□□ -0.4
GPN1-212ENST00000616939 IGKV1-16P04430 117 aa12.58□□□□□ -0.4
GPN1-212ENST00000616939 SUB1P53999 127 aaKnown RBP eCLIP12.58□□□□□ -0.44e-8■■■■■ 38
GPN1-212ENST00000616939 OCIAD2Q56VL3 154 aa12.58□□□□□ -0.4
GPN1-212ENST00000616939 PRR27Q6MZM9 219 aa12.58□□□□□ -0.4
GPN1-212ENST00000616939 CNEP1R1Q8N9A8 125 aa12.58□□□□□ -0.4
GPN1-212ENST00000616939 GATD1Q8NB37 220 aa12.58□□□□□ -0.4
GPN1-212ENST00000616939 H1FXQ92522 213 aaKnown RBP12.58□□□□□ -0.4
GPN1-212ENST00000616939 MAP1LC3CQ9BXW4 147 aa12.58□□□□□ -0.4
GPN1-212ENST00000616939 PLSCR4Q9NRQ2 329 aa12.58□□□□□ -0.4
GPN1-212ENST00000616939 HSPB8Q9UJY1 196 aa12.58□□□□□ -0.4
GPN1-212ENST00000616939 ZNF835Q9Y2P0 537 aa12.58□□□□□ -0.4
GPN1-212ENST00000616939 LOC102724200A0A096LPH7 203 aaPredicted RBP12.57□□□□□ -0.4
GPN1-212ENST00000616939 NPIPB6E9PJ23 425 aa12.57□□□□□ -0.4
GPN1-212ENST00000616939 SLC25A5P05141 298 aaKnown RBP12.57□□□□□ -0.4
GPN1-212ENST00000616939 MSMPQ1L6U9 139 aa12.57□□□□□ -0.4
GPN1-212ENST00000616939 LINC01545Q5VT33 79 aa12.57□□□□□ -0.4
GPN1-212ENST00000616939 TCF24Q7RTU0 167 aa12.57□□□□□ -0.4
GPN1-212ENST00000616939 C5orf17Q8NAS9 161 aa12.57□□□□□ -0.4
GPN1-212ENST00000616939 OR10W1Q8NGF6 305 aa12.57□□□□□ -0.4
GPN1-212ENST00000616939 DPF1Q92782 380 aa12.57□□□□□ -0.4
GPN1-212ENST00000616939 GAFA1Q96PS6 74 aa12.57□□□□□ -0.4
GPN1-212ENST00000616939 TNCP24821 2201 aa12.57□□□□□ -0.4
GPN1-212ENST00000616939 SH2D7A6NKC9 451 aaPredicted RBP12.56□□□□□ -0.4
GPN1-212ENST00000616939 PRR33A8MZF0 331 aa12.56□□□□□ -0.4
GPN1-212ENST00000616939 P01737 135 aa12.56□□□□□ -0.4
GPN1-212ENST00000616939 C3orf36Q3SXR2 165 aa12.56□□□□□ -0.4
GPN1-212ENST00000616939 FAM71F2Q6NXP2 309 aa12.56□□□□□ -0.4
GPN1-212ENST00000616939 C16orf54Q6UWD8 224 aa12.56□□□□□ -0.4
GPN1-212ENST00000616939 ZCCHC24Q8N2G6 241 aaKnown RBP12.56□□□□□ -0.4
GPN1-212ENST00000616939 C9orf106Q8NAJ2 232 aa12.56□□□□□ -0.4
GPN1-212ENST00000616939 RNF7Q9UBF6 113 aa12.56□□□□□ -0.4
GPN1-212ENST00000616939 SLC25A15Q9Y619 301 aa12.56□□□□□ -0.4
GPN1-212ENST00000616939 PRR14LQ5THK1 2151 aa12.56□□□□□ -0.4
GPN1-212ENST00000616939 MUC21A0A0G2JKD1 596 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 TRBV6-1A0A0K0K1D8 114 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 MUC21A0A140T8X8 626 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 hDV102S1A0JD36 115 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 PCNX2A6NKB5 2137 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 HAX1O00165 279 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 MOSP00540 346 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 GNG5P63218 68 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 SSBP2P81877 361 aaPredicted RBP12.55□□□□□ -0.4
GPN1-212ENST00000616939 MUC21Q5SSG8 566 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 PVRIGQ6DKI7 326 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 LINC00173Q6ZV60 143 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 BHLHA15Q7RTS1 189 aaPredicted RBP12.55□□□□□ -0.4
GPN1-212ENST00000616939 VSTM2AQ8TAG5 236 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 GTSF1Q8WW33 167 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 ITLN1Q8WWA0 313 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 ST6GALNAC6Q969X2 333 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 HARBI1Q96MB7 349 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 FNDC4Q9H6D8 234 aaPredicted RBP12.55□□□□□ -0.4
GPN1-212ENST00000616939 RNF151Q2KHN1 245 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 ZNF788Q6ZQV5 615 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 OR5AN1Q8NGI8 311 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 OR10X1Q8NGY0 326 aa12.55□□□□□ -0.4
GPN1-212ENST00000616939 ZNF71Q9NQZ8 489 aaPredicted RBP12.55□□□□□ -0.4
GPN1-212ENST00000616939 PEF1Q9UBV8 284 aaKnown RBP12.55□□□□□ -0.4
GPN1-212ENST00000616939 HEATR1Q9H583 2144 aaKnown RBP12.55□□□□□ -0.4
GPN1-212ENST00000616939 IGLV3-9A0A075B6K5 115 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 OR2T8A6NH00 312 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 M0R296 226 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 CRYGCP07315 174 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 COX8AP10176 69 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 PSG1P11464 419 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 GLRXP35754 106 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 SEC11AP67812 179 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 PAX2Q02962 417 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 SPRNQ5BIV9 151 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 LDLRAD2Q5SZI1 272 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 ASPHD1Q5U4P2 390 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 ETFRF1Q6IPR1 90 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 LINC00305Q7Z4B0 112 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 RBMXL3Q8N7X1 1067 aaKnown RBP12.54□□□□□ -0.4
GPN1-212ENST00000616939 NPIPB3Q92617 1050 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 TRGV9Q99603 122 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 TRIOO75962 3097 aa12.54□□□□□ -0.4
GPN1-212ENST00000616939 PGPA6NDG6 321 aa12.53□□□□□ -0.4
GPN1-212ENST00000616939 LAMTOR5O43504 91 aa12.53□□□□□ -0.4
GPN1-212ENST00000616939 FOXA3P55318 350 aaPredicted RBP12.53□□□□□ -0.4
GPN1-212ENST00000616939 MRPL20Q9BYC9 149 aaKnown RBP12.53□□□□□ -0.4
GPN1-212ENST00000616939 LINC00312Q9Y6C7 94 aa12.53□□□□□ -0.4
GPN1-212ENST00000616939 hADV38S2A0JD32 116 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms