RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 LYPD6Q86Y78 171 aa12.58□□□□□ -0.4
NOP56-220ENST00000616692 MMD2Q8IY49 270 aa12.58□□□□□ -0.4
NOP56-220ENST00000616692 TNFRSF19Q9NS68 423 aa12.58□□□□□ -0.4
NOP56-220ENST00000616692 C11orf94C9JXX5 98 aa12.57□□□□□ -0.4
NOP56-220ENST00000616692 PAGE4O60829 102 aa12.57□□□□□ -0.4
NOP56-220ENST00000616692 TUSC2O75896 110 aa12.57□□□□□ -0.4
NOP56-220ENST00000616692 GNB1P62873 340 aa12.57□□□□□ -0.4
NOP56-220ENST00000616692 GNG5P63218 68 aa12.57□□□□□ -0.4
NOP56-220ENST00000616692 C1orf140Q5VVS0 124 aa12.57□□□□□ -0.4
NOP56-220ENST00000616692 LILRA3Q8N6C8 439 aaPredicted RBP12.57□□□□□ -0.4
NOP56-220ENST00000616692 ZNRF2Q8NHG8 242 aa12.57□□□□□ -0.4
NOP56-220ENST00000616692 NMNAT3Q96T66 252 aa12.57□□□□□ -0.4
NOP56-220ENST00000616692 TMEM262E9PQX1 116 aa12.57□□□□□ -0.4
NOP56-220ENST00000616692 RPS28P62857 69 aaKnown RBP12.57□□□□□ -0.4
NOP56-220ENST00000616692 C1QL2Q7Z5L3 287 aa12.57□□□□□ -0.4
NOP56-220ENST00000616692 NFE4Q86UQ8 179 aa12.57□□□□□ -0.4
NOP56-220ENST00000616692 RNF152Q8N8N0 203 aa12.57□□□□□ -0.4
NOP56-220ENST00000616692 OR2H1Q9GZK4 316 aa12.57□□□□□ -0.4
NOP56-220ENST00000616692 AMY1AP04745 511 aa12.56□□□□□ -0.4
NOP56-220ENST00000616692 C8orf88P0DMB2 117 aa12.56□□□□□ -0.4
NOP56-220ENST00000616692 VSIG8P0DPA2 414 aa12.56□□□□□ -0.4
NOP56-220ENST00000616692 ZNF136P52737 540 aa12.56□□□□□ -0.4
NOP56-220ENST00000616692 CXorf66Q5JRM2 361 aaPredicted RBP12.56□□□□□ -0.4
NOP56-220ENST00000616692 PPP1R27Q86WC6 154 aa12.56□□□□□ -0.4
NOP56-220ENST00000616692 ZNF808Q8N4W9 903 aaPredicted RBP12.56□□□□□ -0.4
NOP56-220ENST00000616692 TRAV17A0A0B4J275 112 aa12.56□□□□□ -0.4
NOP56-220ENST00000616692 LYPD3O95274 346 aa12.56□□□□□ -0.4
NOP56-220ENST00000616692 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.55□□□□□ -0.4
NOP56-220ENST00000616692 SNCGO76070 127 aa12.55□□□□□ -0.4
NOP56-220ENST00000616692 KLF5Q13887 457 aaPredicted RBP12.55□□□□□ -0.4
NOP56-220ENST00000616692 FAM57BQ71RH2 274 aa12.55□□□□□ -0.4
NOP56-220ENST00000616692 OR2A1Q8NGT9 310 aa12.55□□□□□ -0.4
NOP56-220ENST00000616692 RNF138Q8WVD3 245 aa12.55□□□□□ -0.4
NOP56-220ENST00000616692 H1FXQ92522 213 aaKnown RBP12.55□□□□□ -0.4
NOP56-220ENST00000616692 GLIPR2Q9H4G4 154 aa12.55□□□□□ -0.4
NOP56-220ENST00000616692 IGLV3-12A0A075B6K2 115 aa12.55□□□□□ -0.4
NOP56-220ENST00000616692 TINCRA0A1B0GVN0 87 aa12.55□□□□□ -0.4
NOP56-220ENST00000616692 CHST1O43916 411 aa12.55□□□□□ -0.4
NOP56-220ENST00000616692 EGR1P18146 543 aa12.55□□□□□ -0.4
NOP56-220ENST00000616692 TAS2R45P59539 299 aa12.55□□□□□ -0.4
NOP56-220ENST00000616692 GAPTQ8N292 157 aa12.55□□□□□ -0.4
NOP56-220ENST00000616692 SSBP3Q9BWW4 388 aaPredicted RBP12.55□□□□□ -0.4
NOP56-220ENST00000616692 NDUFB4O95168 129 aa12.55□□□□□ -0.4
NOP56-220ENST00000616692 PEBP1P30086 187 aaKnown RBP12.55□□□□□ -0.4
NOP56-220ENST00000616692 TNFAIP6P98066 277 aaPredicted RBP12.55□□□□□ -0.4
NOP56-220ENST00000616692 KRTAP21-3Q3LHN1 58 aa12.55□□□□□ -0.4
NOP56-220ENST00000616692 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.55□□□□□ -0.4
NOP56-220ENST00000616692 TEX45Q8NA69 505 aa12.55□□□□□ -0.4
NOP56-220ENST00000616692 PHLDA1Q8WV24 401 aaPredicted RBP12.55□□□□□ -0.4
NOP56-220ENST00000616692 LRRC29Q8WV35 223 aa12.55□□□□□ -0.4
NOP56-220ENST00000616692 PPDPFLQ8WWR9 84 aa12.55□□□□□ -0.4
NOP56-220ENST00000616692 RPL27P61353 136 aaKnown RBP12.54□□□□□ -0.4
NOP56-220ENST00000616692 FHL1Q13642 323 aa12.54□□□□□ -0.4
NOP56-220ENST00000616692 ARFRP1Q13795 201 aa12.54□□□□□ -0.4
NOP56-220ENST00000616692 RNPS1Q15287 305 aaKnown RBP12.54□□□□□ -0.4
NOP56-220ENST00000616692 RAB42Q8N4Z0 105 aa12.54□□□□□ -0.4
NOP56-220ENST00000616692 RPP25LQ8N5L8 163 aaKnown RBP12.54□□□□□ -0.4
NOP56-220ENST00000616692 C1QTNF5Q9BXJ0 243 aa12.54□□□□□ -0.4
NOP56-220ENST00000616692 SAP30LQ9HAJ7 183 aa12.54□□□□□ -0.4
NOP56-220ENST00000616692 MDC1Q14676 2089 aaKnown RBP12.54□□□□□ -0.4
NOP56-220ENST00000616692 CTXND1A0A1B0GTU2 59 aa12.54□□□□□ -0.4
NOP56-220ENST00000616692 OR2J3O76001 311 aa12.54□□□□□ -0.4
NOP56-220ENST00000616692 NAPSAO96009 420 aa12.54□□□□□ -0.4
NOP56-220ENST00000616692 V9GYY9 64 aa12.54□□□□□ -0.4
NOP56-220ENST00000616692 HIVEP3Q5T1R4 2406 aa12.54□□□□□ -0.4
NOP56-220ENST00000616692 NDUFB2O95178 105 aa12.53□□□□□ -0.4
NOP56-220ENST00000616692 KIR2DS2P43631 304 aa12.53□□□□□ -0.4
NOP56-220ENST00000616692 ABCA11PQ4W5N1 156 aa12.53□□□□□ -0.4
NOP56-220ENST00000616692 MBNL2Q5VZF2 373 aaKnown RBP12.53□□□□□ -0.4
NOP56-220ENST00000616692 MMABQ96EY8 250 aaPredicted RBP12.53□□□□□ -0.4
NOP56-220ENST00000616692 TRBV20OR9-2A0A075B6H5 130 aa12.53□□□□□ -0.4
NOP56-220ENST00000616692 A0A0A6YYD4 124 aa12.53□□□□□ -0.4
NOP56-220ENST00000616692 OR2H2O95918 312 aa12.53□□□□□ -0.4
NOP56-220ENST00000616692 IGLC6P0CF74 106 aa12.53□□□□□ -0.4
NOP56-220ENST00000616692 MGST1P10620 155 aaKnown RBP12.53□□□□□ -0.4
NOP56-220ENST00000616692 MEOX1P50221 254 aa12.53□□□□□ -0.4
NOP56-220ENST00000616692 HERV-K104P61576 105 aa12.53□□□□□ -0.4
NOP56-220ENST00000616692 ARL16Q0P5N6 197 aa12.53□□□□□ -0.4
NOP56-220ENST00000616692 TMEM219Q86XT9 240 aa12.53□□□□□ -0.4
NOP56-220ENST00000616692 OOEPA6NGQ2 149 aa12.52□□□□□ -0.41
NOP56-220ENST00000616692 ENSAO43768 121 aaKnown RBP12.52□□□□□ -0.41
NOP56-220ENST00000616692 TIMM8AO60220 97 aaPredicted RBP12.52□□□□□ -0.41
NOP56-220ENST00000616692 LINC00173Q6ZV60 143 aa12.52□□□□□ -0.41
NOP56-220ENST00000616692 OR10J6PQ8NGY7 276 aa12.52□□□□□ -0.41
NOP56-220ENST00000616692 ITLN2Q8WWU7 325 aaPredicted RBP12.52□□□□□ -0.41
NOP56-220ENST00000616692 LINC00477Q96M19 166 aa12.52□□□□□ -0.41
NOP56-220ENST00000616692 SLC25A22Q9H936 323 aa12.52□□□□□ -0.41
NOP56-220ENST00000616692 C21orf62Q9NYP8 219 aa12.52□□□□□ -0.41
NOP56-220ENST00000616692 YTHDF2Q9Y5A9 579 aaKnown RBP12.52□□□□□ -0.41
NOP56-220ENST00000616692 A0A1W2PRX2 142 aa12.52□□□□□ -0.41
NOP56-220ENST00000616692 TMEM14DPA8MWL7 114 aa12.52□□□□□ -0.41
NOP56-220ENST00000616692 LEPROTL1O95214 131 aa12.52□□□□□ -0.41
NOP56-220ENST00000616692 OPRK1P41145 380 aa12.52□□□□□ -0.41
NOP56-220ENST00000616692 RPL31P62899 125 aaKnown RBP12.52□□□□□ -0.41
NOP56-220ENST00000616692 DEFB110Q30KQ9 67 aa12.52□□□□□ -0.41
NOP56-220ENST00000616692 IGKV1D-33P01593 117 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 IGKV1-33P01594 117 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 HMGN2P05204 90 aaKnown RBP12.51□□□□□ -0.41
NOP56-220ENST00000616692 CRYGDP07320 174 aa12.51□□□□□ -0.41
NOP56-220ENST00000616692 ZNF688P0C7X2 276 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms