RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 NDUFA4O00483 81 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 MEIG1Q5JSS6 88 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 C10orf105Q8TEF2 133 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 PMCHL2Q9BQD1 86 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 IGHV3-49A0A0A0MS15 119 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 IGHV3-35A0A0C4DH35 117 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 CENPWQ5EE01 88 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 SFRP2Q96HF1 295 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 S4R3C0 116 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 LOC389332A0A1B0GUA5 103 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 SUMO2P61956 95 aaKnown RBP7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 RCHY1Q96PM5 261 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 IGKV1-27A0A075B6S5 117 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 IGHV3OR16-13A0A075B7E8 117 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 IGHV3-74A0A0B4J1X5 117 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 PMS2P11Q13670 270 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 COTL1Q14019 142 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 LINC01559Q495D7 138 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 PDZD11Q5EBL8 140 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 REC114Q7Z4M0 266 aa7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 ELF5Q9UKW6 265 aaPredicted RBP7.94□□□□□ -1.14
TNFRSF9-204ENST00000615230 LINC00862A6NCI5 91 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 C11orf44Q8N8P7 122 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 COQ2Q96H96 371 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 TMEM89A2RUT3 159 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 PSCAO43653 123 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 PPBPP02775 128 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 CFPP27918 469 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 TFF3Q07654 80 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 FOXE3Q13461 319 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 RNF138Q8WVD3 245 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 IGKV1D-13A0A0B4J2D9 117 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 IGKV1-13P0DP09 117 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 RPRMLQ8N4K4 120 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 PARD6GQ9BYG4 376 aaPredicted RBP7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 EPDR1Q9UM22 224 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 EIF3GO75821 320 aaKnown RBP eCLIP7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 CD24P25063 80 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 FAM90A2PQ658T7 463 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 OR4C5Q8NGB2 326 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 MRPL27Q9P0M9 148 aaKnown RBP7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 RFNGQ9Y644 331 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 CKAP5Q14008 2032 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 PCM1Q15154 2024 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 CCDC88CQ9P219 2028 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 A0A1B0GUT8 65 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 LINC00587B1AMM8 73 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 HOXA3O43365 443 aaPredicted RBP7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 CDX1P47902 265 aaPredicted RBP7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 YPEL3P61236 119 aaPredicted RBP7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 TMEM249Q2WGJ8 235 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 NMSQ5H8A3 153 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 PRELID3AQ96N28 172 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 DCAF16Q9NXF7 216 aa7.93□□□□□ -1.14
TNFRSF9-204ENST00000615230 C7orf77A4D0Y5 90 aa7.92□□□□□ -1.14
TNFRSF9-204ENST00000615230 HOXB4P17483 251 aaPredicted RBP7.92□□□□□ -1.14
TNFRSF9-204ENST00000615230 FAM24BQ8N5W8 94 aa7.92□□□□□ -1.14
TNFRSF9-204ENST00000615230 C5orf52A6NGY3 159 aa7.92□□□□□ -1.14
TNFRSF9-204ENST00000615230 M0R381 172 aa7.92□□□□□ -1.14
TNFRSF9-204ENST00000615230 LDLRAD4O15165 306 aa7.92□□□□□ -1.14
TNFRSF9-204ENST00000615230 PDE6HQ13956 83 aa7.92□□□□□ -1.14
TNFRSF9-204ENST00000615230 RAMP3O60896 148 aa7.92□□□□□ -1.14
TNFRSF9-204ENST00000615230 RPL36AP83881 106 aaKnown RBP7.92□□□□□ -1.14
TNFRSF9-204ENST00000615230 MIR17HGQ75NE6 70 aa7.92□□□□□ -1.14
TNFRSF9-204ENST00000615230 NUDT10Q8NFP7 164 aa7.92□□□□□ -1.14
TNFRSF9-204ENST00000615230 RPL36ALQ969Q0 106 aaKnown RBP7.92□□□□□ -1.14
TNFRSF9-204ENST00000615230 PRB1P04280 392 aa7.92□□□□□ -1.14
TNFRSF9-204ENST00000615230 LOXP28300 417 aaPredicted RBP7.92□□□□□ -1.14
TNFRSF9-204ENST00000615230 PMCHL1Q16048 86 aa7.92□□□□□ -1.14
TNFRSF9-204ENST00000615230 RHPN1-AS1Q9BWJ2 59 aa7.92□□□□□ -1.14
TNFRSF9-204ENST00000615230 A0A0A6YYD4 124 aa7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 RBMY1BA6NDE4 496 aaKnown RBP7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 RBMY1EA6NEQ0 496 aaKnown RBP7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 RBMY1DP0C7P1 496 aaKnown RBP7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 RBMY1A1P0DJD3 496 aaKnown RBP7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 RBMY1CP0DJD4 496 aa7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 ZNF502Q8TBZ5 544 aa7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 GON4LQ3T8J9 2241 aa7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 LOXL1Q08397 574 aaPredicted RBP7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 PSG8Q9UQ74 426 aa7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 IFI27P40305 119 aaPredicted RBP7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 MST1LQ2TV78 715 aa7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 MORN3Q6PF18 240 aaPredicted RBP7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 OR4D5Q8NGN0 318 aa7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 GPHA2Q96T91 129 aa7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 SLC25A39Q9BZJ4 359 aaPredicted RBP7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 ID3Q02535 119 aa7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 SLAQ13239 276 aa7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 WDR83OSQ9Y284 106 aa7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 ABCA7Q8IZY2 2146 aa7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 RPL35AP18077 110 aaKnown RBP7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 ZNF138P52744 262 aa7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 IL36BQ9NZH7 164 aa7.91□□□□□ -1.14
TNFRSF9-204ENST00000615230 SOD3P08294 240 aa7.9□□□□□ -1.14
TNFRSF9-204ENST00000615230 TCF23Q7RTU1 214 aa7.9□□□□□ -1.14
TNFRSF9-204ENST00000615230 PARLQ9H300 379 aa7.9□□□□□ -1.14
TNFRSF9-204ENST00000615230 IZUMO1RA6ND01 250 aa7.9□□□□□ -1.14
TNFRSF9-204ENST00000615230 LAIR2Q6ISS4 152 aa7.9□□□□□ -1.14
TNFRSF9-204ENST00000615230 IFITM10A6NMD0 228 aa7.9□□□□□ -1.14
TNFRSF9-204ENST00000615230 ATP6V0E1O15342 81 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms