RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 DNAH1Q9P2D7 4330 aa16.75■□□□□ 0.27
FAM228B-208ENST00000613899 A0A0B4J2A0 478 aa16.74■□□□□ 0.27
FAM228B-208ENST00000613899 PIGBOS1A0A0B4J2F0 54 aa16.74■□□□□ 0.27
FAM228B-208ENST00000613899 CXorf65A6NEN9 183 aa16.74■□□□□ 0.27
FAM228B-208ENST00000613899 AKR1C4P17516 323 aa16.74■□□□□ 0.27
FAM228B-208ENST00000613899 NPY1RP25929 384 aa16.74■□□□□ 0.27
FAM228B-208ENST00000613899 CCR6P51684 374 aa16.74■□□□□ 0.27
FAM228B-208ENST00000613899 RND2P52198 227 aa16.74■□□□□ 0.27
FAM228B-208ENST00000613899 SRPXP78539 464 aa16.74■□□□□ 0.27
FAM228B-208ENST00000613899 NMSQ5H8A3 153 aa16.74■□□□□ 0.27
FAM228B-208ENST00000613899 GATAD1Q8WUU5 269 aa16.74■□□□□ 0.27
FAM228B-208ENST00000613899 SHPKQ9UHJ6 478 aa16.74■□□□□ 0.27
FAM228B-208ENST00000613899 RABAC1Q9UI14 185 aa16.74■□□□□ 0.27
FAM228B-208ENST00000613899 NUPR2A6NF83 97 aa16.73■□□□□ 0.27
FAM228B-208ENST00000613899 NXPH3O95157 252 aa16.73■□□□□ 0.27
FAM228B-208ENST00000613899 IGLC1P0CG04 106 aa16.73■□□□□ 0.27
FAM228B-208ENST00000613899 P2RY1P47900 373 aa16.73■□□□□ 0.27
FAM228B-208ENST00000613899 AP3S2P59780 193 aa16.73■□□□□ 0.27
FAM228B-208ENST00000613899 PMS2P11Q13670 270 aa16.73■□□□□ 0.27
FAM228B-208ENST00000613899 PRSS54Q6PEW0 395 aa16.73■□□□□ 0.27
FAM228B-208ENST00000613899 GRAMD2BQ96HH9 432 aa16.73■□□□□ 0.27
FAM228B-208ENST00000613899 PRR13Q9NZ81 148 aa16.73■□□□□ 0.27
FAM228B-208ENST00000613899 OR10J1P30954 320 aa16.72■□□□□ 0.27
FAM228B-208ENST00000613899 DEFB131AP59861 70 aa16.72■□□□□ 0.27
FAM228B-208ENST00000613899 SUPT4H1P63272 117 aaKnown RBP16.72■□□□□ 0.27
FAM228B-208ENST00000613899 SMCO1Q147U7 214 aa16.72■□□□□ 0.27
FAM228B-208ENST00000613899 LGI3Q8N145 548 aa16.72■□□□□ 0.27
FAM228B-208ENST00000613899 Q8WTZ3 238 aa16.72■□□□□ 0.27
FAM228B-208ENST00000613899 EIF2B2P49770 351 aaKnown RBP16.71■□□□□ 0.27
FAM228B-208ENST00000613899 YPEL3P61236 119 aaPredicted RBP16.71■□□□□ 0.27
FAM228B-208ENST00000613899 EWSR1Q01844 656 aaKnown RBP eCLIP16.71■□□□□ 0.27
FAM228B-208ENST00000613899 KLF9Q13886 244 aaPredicted RBP16.71■□□□□ 0.27
FAM228B-208ENST00000613899 PYDC2Q56P42 97 aa16.71■□□□□ 0.27
FAM228B-208ENST00000613899 TOMM5Q8N4H5 51 aa16.71■□□□□ 0.27
FAM228B-208ENST00000613899 STXBP6Q8NFX7 210 aa16.71■□□□□ 0.27
FAM228B-208ENST00000613899 TMEM170AQ8WVE7 144 aa16.71■□□□□ 0.27
FAM228B-208ENST00000613899 TRIM63Q969Q1 353 aa16.71■□□□□ 0.27
FAM228B-208ENST00000613899 HSPB7Q9UBY9 170 aa16.71■□□□□ 0.27
FAM228B-208ENST00000613899 U3KQ87 197 aa16.71■□□□□ 0.27
FAM228B-208ENST00000613899 IFNA10P01566 189 aa16.7■□□□□ 0.26
FAM228B-208ENST00000613899 LEMD1Q68G75 181 aa16.7■□□□□ 0.26
FAM228B-208ENST00000613899 LYZL2Q7Z4W2 148 aa16.7■□□□□ 0.26
FAM228B-208ENST00000613899 DTD1Q8TEA8 209 aa16.7■□□□□ 0.26
FAM228B-208ENST00000613899 CCDC160A6NGH7 325 aa16.69■□□□□ 0.26
FAM228B-208ENST00000613899 K7EQG2 157 aa16.69■□□□□ 0.26
FAM228B-208ENST00000613899 CA1P00915 261 aaPredicted RBP16.69■□□□□ 0.26
FAM228B-208ENST00000613899 HNRNPCP07910 306 aaKnown RBP eCLIP16.69■□□□□ 0.26
FAM228B-208ENST00000613899 S100A5P33763 92 aa16.69■□□□□ 0.26
FAM228B-208ENST00000613899 STHQ8IWL8 128 aa16.69■□□□□ 0.26
FAM228B-208ENST00000613899 FAM24BQ8N5W8 94 aa16.69■□□□□ 0.26
FAM228B-208ENST00000613899 DEDD2Q8WXF8 326 aa16.69■□□□□ 0.26
FAM228B-208ENST00000613899 RARRES2Q99969 163 aa16.69■□□□□ 0.26
FAM228B-208ENST00000613899 V9GYH0 126 aa16.69■□□□□ 0.26
FAM228B-208ENST00000613899 ALMS1Q8TCU4 4167 aa16.68■□□□□ 0.26
FAM228B-208ENST00000613899 DUXBA0A1W2PPF3 345 aa16.68■□□□□ 0.26
FAM228B-208ENST00000613899 HELTA6NFD8 242 aa16.68■□□□□ 0.26
FAM228B-208ENST00000613899 RBMS2Q15434 407 aaKnown RBP16.68■□□□□ 0.26
FAM228B-208ENST00000613899 TMED4Q7Z7H5 227 aa16.68■□□□□ 0.26
FAM228B-208ENST00000613899 NPIPB3Q92617 1050 aa16.68■□□□□ 0.26
FAM228B-208ENST00000613899 ACY3Q96HD9 319 aa16.68■□□□□ 0.26
FAM228B-208ENST00000613899 U3KQE9 123 aa16.68■□□□□ 0.26
FAM228B-208ENST00000613899 IL4P05112 153 aa16.67■□□□□ 0.26
FAM228B-208ENST00000613899 ATP5IP56385 69 aaPredicted RBP16.67■□□□□ 0.26
FAM228B-208ENST00000613899 TMEM128Q5BJH2 165 aa16.67■□□□□ 0.26
FAM228B-208ENST00000613899 OR1S1Q8NH92 325 aa16.67■□□□□ 0.26
FAM228B-208ENST00000613899 RBKSQ9H477 322 aa16.67■□□□□ 0.26
FAM228B-208ENST00000613899 TOMM40O96008 361 aa16.66■□□□□ 0.26
FAM228B-208ENST00000613899 AP2S1P53680 142 aaPredicted RBP16.66■□□□□ 0.26
FAM228B-208ENST00000613899 CEMP1Q6PRD7 247 aaPredicted RBP16.66■□□□□ 0.26
FAM228B-208ENST00000613899 DCANP1Q8TF63 244 aa16.66■□□□□ 0.26
FAM228B-208ENST00000613899 SLC25A21Q9BQT8 299 aaPredicted RBP16.66■□□□□ 0.26
FAM228B-208ENST00000613899 C11orf68Q9H3H3 251 aaKnown RBP16.66■□□□□ 0.26
FAM228B-208ENST00000613899 HYDINQ4G0P3 5121 aa16.65■□□□□ 0.26
FAM228B-208ENST00000613899 IFNA4P05014 189 aa16.65■□□□□ 0.26
FAM228B-208ENST00000613899 ZNF688P0C7X2 276 aa16.65■□□□□ 0.26
FAM228B-208ENST00000613899 USF2Q15853 346 aaPredicted RBP16.65■□□□□ 0.26
FAM228B-208ENST00000613899 ZNF79Q15937 498 aa16.65■□□□□ 0.26
FAM228B-208ENST00000613899 C16orf54Q6UWD8 224 aa16.65■□□□□ 0.26
FAM228B-208ENST00000613899 OR11H2Q8NH07 326 aa16.65■□□□□ 0.26
FAM228B-208ENST00000613899 GLMPQ8WWB7 406 aa16.65■□□□□ 0.26
FAM228B-208ENST00000613899 LINC00476Q8WZB0 136 aa16.65■□□□□ 0.26
FAM228B-208ENST00000613899 KLK5Q9Y337 293 aaPredicted RBP16.65■□□□□ 0.26
FAM228B-208ENST00000613899 RD3LP0DJH9 198 aa16.64■□□□□ 0.25
FAM228B-208ENST00000613899 VAMP1P23763 118 aa16.64■□□□□ 0.25
FAM228B-208ENST00000613899 TMEM41BQ5BJD5 291 aa16.64■□□□□ 0.25
FAM228B-208ENST00000613899 NUP62P37198 522 aaPredicted RBP16.63■□□□□ 0.25
FAM228B-208ENST00000613899 DHRS2Q13268 280 aa16.63■□□□□ 0.25
FAM228B-208ENST00000613899 TRPT1Q86TN4 253 aaKnown RBP16.63■□□□□ 0.25
FAM228B-208ENST00000613899 CCDC190Q86UF4 302 aa16.63■□□□□ 0.25
FAM228B-208ENST00000613899 LRTM2Q8N967 370 aa16.63■□□□□ 0.25
FAM228B-208ENST00000613899 PLECQ15149 4684 aaKnown RBP16.62■□□□□ 0.25
FAM228B-208ENST00000613899 SPP1P10451 314 aa16.62■□□□□ 0.25
FAM228B-208ENST00000613899 PSG1P11464 419 aa16.62■□□□□ 0.25
FAM228B-208ENST00000613899 SLC25A6P12236 298 aa16.62■□□□□ 0.25
FAM228B-208ENST00000613899 MORN3Q6PF18 240 aaPredicted RBP16.62■□□□□ 0.25
FAM228B-208ENST00000613899 OR51G1Q8NGK1 321 aa16.62■□□□□ 0.25
FAM228B-208ENST00000613899 SLC35E1Q96K37 410 aa16.62■□□□□ 0.25
FAM228B-208ENST00000613899 MFFQ9GZY8 342 aa16.62■□□□□ 0.25
FAM228B-208ENST00000613899 RBM38Q9H0Z9 239 aaKnown RBP16.62■□□□□ 0.25
FAM228B-208ENST00000613899 AGRNO00468 2067 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms