RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 MALRD1Q5VYJ5 2156 aa10.38□□□□□ -0.75
TNFAIP3-206ENST00000612899 GBF1Q92538 1859 aa10.38□□□□□ -0.75
TNFAIP3-206ENST00000612899 NBR2O15453 112 aa10.38□□□□□ -0.75
TNFAIP3-206ENST00000612899 ZNF324O75467 553 aaPredicted RBP10.38□□□□□ -0.75
TNFAIP3-206ENST00000612899 RPL23P62829 140 aaKnown RBP10.38□□□□□ -0.75
TNFAIP3-206ENST00000612899 C10orf55Q5SWW7 151 aa10.38□□□□□ -0.75
TNFAIP3-206ENST00000612899 KCNS1Q96KK3 526 aa10.38□□□□□ -0.75
TNFAIP3-206ENST00000612899 IL36BQ9NZH7 164 aa10.38□□□□□ -0.75
TNFAIP3-206ENST00000612899 METRNQ9UJH8 293 aa10.38□□□□□ -0.75
TNFAIP3-206ENST00000612899 ZSWIM8A7E2V4 1837 aa10.38□□□□□ -0.75
TNFAIP3-206ENST00000612899 DPRXA6NFQ7 191 aa10.38□□□□□ -0.75
TNFAIP3-206ENST00000612899 RPUSD1Q9UJJ7 312 aaKnown RBP10.38□□□□□ -0.75
TNFAIP3-206ENST00000612899 TRBV20OR9-2A0A075B6H5 130 aa10.37□□□□□ -0.75
TNFAIP3-206ENST00000612899 TRBV9A0A0B4J1U6 114 aa10.37□□□□□ -0.75
TNFAIP3-206ENST00000612899 TBR1Q16650 682 aa10.37□□□□□ -0.75
TNFAIP3-206ENST00000612899 SVIPQ8NHG7 77 aa10.37□□□□□ -0.75
TNFAIP3-206ENST00000612899 A0A1B0GW15 77 aa10.37□□□□□ -0.75
TNFAIP3-206ENST00000612899 FAM159AQ6UWV7 190 aa10.37□□□□□ -0.75
TNFAIP3-206ENST00000612899 DOCK11Q5JSL3 2073 aa10.37□□□□□ -0.75
TNFAIP3-206ENST00000612899 PGPEP1LA6NFU8 196 aa10.37□□□□□ -0.75
TNFAIP3-206ENST00000612899 NPIPB6E9PJ23 425 aa10.37□□□□□ -0.75
TNFAIP3-206ENST00000612899 WISP1O95388 367 aa10.37□□□□□ -0.75
TNFAIP3-206ENST00000612899 RRN3P1Q2M238 152 aa10.37□□□□□ -0.75
TNFAIP3-206ENST00000612899 GPR82Q96P67 336 aa10.37□□□□□ -0.75
TNFAIP3-206ENST00000612899 WDR83OSQ9Y284 106 aa10.37□□□□□ -0.75
TNFAIP3-206ENST00000612899 C9JCJ5 164 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 M0R381 172 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 C1QTNF9P0C862 333 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 SNRPD3P62318 126 aaKnown RBP10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 HGFACQ04756 655 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 TMEM42Q69YG0 159 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 VSIRQ9H7M9 311 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 SLC25A15Q9Y619 301 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 HLA-DRB1P01911 266 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 AMBPP02760 352 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 PYYP10082 97 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 CD69Q07108 199 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 TMEM136Q6ZRR5 245 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 TIMM23O14925 209 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 RAX2Q96IS3 184 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 DUX5Q96PT3 197 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 EMP1P54849 157 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 TEX29Q8N6K0 151 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 RNASE7Q9H1E1 156 aaKnown RBP10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 Q9H3A6 140 aa10.36□□□□□ -0.75
TNFAIP3-206ENST00000612899 QRFPP83859 136 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 A0A1B0GUT8 65 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 ESDP10768 282 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 GNG5P63218 68 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 PRCDQ00LT1 54 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 PAX2Q02962 417 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 ZNF672Q499Z4 452 aaPredicted RBP10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 AMMECR1LQ6DCA0 310 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 SPCS1Q9Y6A9 102 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 MGAMO43451 1857 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 TSPOP30536 169 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 ZNF56Q15929 161 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 CD177Q8N6Q3 437 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 CST9LQ9H4G1 147 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 A0A0G2JLM5 398 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 THBDP07204 575 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 GCSHP23434 173 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 TMEM170AQ8WVE7 144 aa10.35□□□□□ -0.75
TNFAIP3-206ENST00000612899 CSPG4Q6UVK1 2322 aa10.34□□□□□ -0.75
TNFAIP3-206ENST00000612899 IGKV1-5P01602 117 aa10.34□□□□□ -0.75
TNFAIP3-206ENST00000612899 PRSS2P07478 247 aa10.34□□□□□ -0.75
TNFAIP3-206ENST00000612899 EFNB3Q15768 340 aa10.34□□□□□ -0.75
TNFAIP3-206ENST00000612899 C18orf15Q96N68 181 aa10.34□□□□□ -0.75
TNFAIP3-206ENST00000612899 RFNGQ9Y644 331 aa10.34□□□□□ -0.75
TNFAIP3-206ENST00000612899 C7orf71A4D174 169 aa10.34□□□□□ -0.75
TNFAIP3-206ENST00000612899 LINC00205P59089 165 aa10.34□□□□□ -0.75
TNFAIP3-206ENST00000612899 NMSQ5H8A3 153 aa10.34□□□□□ -0.75
TNFAIP3-206ENST00000612899 ZNF524Q96C55 264 aa10.34□□□□□ -0.75
TNFAIP3-206ENST00000612899 SEPSECSQ9HD40 501 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-206ENST00000612899 MYO18BQ8IUG5 2567 aa10.34□□□□□ -0.75
TNFAIP3-206ENST00000612899 CYTL1Q9NRR1 136 aa10.33□□□□□ -0.75
TNFAIP3-206ENST00000612899 YLPM1P49750 1951 aaKnown RBP10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 HIGD1CA8MV81 97 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 H3BVH4 76 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 TMEM249Q2WGJ8 235 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 KIR3DL3Q8N743 410 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 RNF125Q96EQ8 232 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 C19orf67A6NJJ6 358 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 H7C2G1 150 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 PRB4P10163 310 aaPredicted RBP10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 TREML4Q6UXN2 200 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 FAM19A2Q8N3H0 131 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 ATP6V0BQ99437 205 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 LINC00527Q9UJ94 153 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 CYSLTR1Q9Y271 337 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 SOX21Q9Y651 276 aaPredicted RBP10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 IGHV2-5P01817 119 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 CD5P06127 495 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 SRSF7Q16629 238 aaKnown RBP eCLIP10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 TCF23Q7RTU1 214 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 RAB37Q96AX2 223 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 KIR2DL4Q99706 377 aa10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 RPP21Q9H633 154 aaKnown RBP10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 F11RQ9Y624 299 aaKnown RBP10.33□□□□□ -0.76
TNFAIP3-206ENST00000612899 PLCE1Q9P212 2302 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms