RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ZNF672Q499Z4 452 aaPredicted RBP11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 PNKDQ8N490 385 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 ZNF596Q8TC21 504 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 BLNKQ8WV28 456 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 SSBP3Q9BWW4 388 aaPredicted RBP11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 RPH3ALQ9UNE2 315 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 V9GYV3 84 aa11.29□□□□□ -0.6
PCDHGA3-202ENST00000612467 PPIAL4CA0A0B4J2A2 164 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 IGHV1-3A0A0C4DH29 117 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 ZNF705GA8MUZ8 300 aaPredicted RBP11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 PPIAL4GP0DN37 164 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 KLRD1Q13241 179 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 OR1B1Q8NGR6 318 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 FAM168AQ92567 244 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 TMEM167BQ9NRX6 74 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 INSIG2Q9Y5U4 225 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 A0A1W2PN81 502 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 IGLV1-47P01700 117 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 IGLV2-8P01709 118 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 LCN2P80188 198 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 ADORA2A-AS1P86434 159 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 C10orf113Q5VZT2 155 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 MMD2Q8IY49 270 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 VSTM2AQ8TAG5 236 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 TXNDC17Q9BRA2 123 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 IL36BQ9NZH7 164 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 S4R3C0 116 aa11.28□□□□□ -0.6
PCDHGA3-202ENST00000612467 A0A087X0M5 115 aa11.27□□□□□ -0.61
PCDHGA3-202ENST00000612467 A0A1B0GX30 115 aa11.27□□□□□ -0.61
PCDHGA3-202ENST00000612467 ARF6P62330 175 aa11.27□□□□□ -0.61
PCDHGA3-202ENST00000612467 KIAA1644Q3SXP7 199 aa11.27□□□□□ -0.61
PCDHGA3-202ENST00000612467 LINC00305Q7Z4B0 112 aa11.27□□□□□ -0.61
PCDHGA3-202ENST00000612467 FAM103A1Q9BTL3 118 aaKnown RBP11.27□□□□□ -0.61
PCDHGA3-202ENST00000612467 TP53TG3Q9ULZ0 132 aa11.27□□□□□ -0.61
PCDHGA3-202ENST00000612467 HILPDAQ9Y5L2 63 aa11.27□□□□□ -0.61
PCDHGA3-202ENST00000612467 TCRBV4S1A1TA0A5B7 111 aa11.27□□□□□ -0.61
PCDHGA3-202ENST00000612467 BUB1B-PAK6H3BSN5 160 aa11.27□□□□□ -0.61
PCDHGA3-202ENST00000612467 CA7P43166 264 aa11.27□□□□□ -0.61
PCDHGA3-202ENST00000612467 ZNF137PP52743 207 aa11.27□□□□□ -0.61
PCDHGA3-202ENST00000612467 RANP62826 216 aaKnown RBP11.27□□□□□ -0.61
PCDHGA3-202ENST00000612467 ST6GALNAC3Q8NDV1 305 aa11.27□□□□□ -0.61
PCDHGA3-202ENST00000612467 OR1L6Q8NGR2 347 aa11.27□□□□□ -0.61
PCDHGA3-202ENST00000612467 SERTAD4Q9NUC0 356 aa11.27□□□□□ -0.61
PCDHGA3-202ENST00000612467 C21orf62-AS1Q17RA5 79 aa11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 Q71RC1 249 aaPredicted RBP11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 REC114Q7Z4M0 266 aa11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 CACNG8Q8WXS5 425 aa11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 PAXXQ9BUH6 204 aa11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 C9JCJ5 164 aa11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 TOX4O94842 621 aa11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 FSTL3O95633 263 aa11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 DDTP30046 118 aa11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 RPL27AP46776 148 aaKnown RBP11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 TAS2R45P59539 299 aa11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 TAS2R60P59551 318 aa11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 COA6Q5JTJ3 125 aaKnown RBP11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 MRPL41Q8IXM3 137 aaKnown RBP11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 KIR3DL3Q8N743 410 aa11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 TNFRSF19Q9NS68 423 aa11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 SIGLEC9Q9Y336 463 aa11.26□□□□□ -0.61
PCDHGA3-202ENST00000612467 PDLIM4P50479 330 aa11.25□□□□□ -0.61
PCDHGA3-202ENST00000612467 SSX2Q16385 188 aa11.25□□□□□ -0.61
PCDHGA3-202ENST00000612467 PRR27Q6MZM9 219 aa11.25□□□□□ -0.61
PCDHGA3-202ENST00000612467 MRPL54Q6P161 138 aaKnown RBP11.25□□□□□ -0.61
PCDHGA3-202ENST00000612467 CLEC7AQ9BXN2 247 aa11.25□□□□□ -0.61
PCDHGA3-202ENST00000612467 MRPL18Q9H0U6 180 aaKnown RBP11.25□□□□□ -0.61
PCDHGA3-202ENST00000612467 SNURFLB1AK76 121 aa11.25□□□□□ -0.61
PCDHGA3-202ENST00000612467 MC5RP33032 325 aa11.25□□□□□ -0.61
PCDHGA3-202ENST00000612467 LINC00310P59036 64 aa11.25□□□□□ -0.61
PCDHGA3-202ENST00000612467 IGF2BP2-AS1Q96M15 143 aa11.25□□□□□ -0.61
PCDHGA3-202ENST00000612467 MSRB2Q9Y3D2 182 aa11.25□□□□□ -0.61
PCDHGA3-202ENST00000612467 NDUFS7O75251 213 aa11.24□□□□□ -0.61
PCDHGA3-202ENST00000612467 JOSD1Q15040 202 aaPredicted RBP11.24□□□□□ -0.61
PCDHGA3-202ENST00000612467 RPEL1Q2QD12 228 aa11.24□□□□□ -0.61
PCDHGA3-202ENST00000612467 KLF17Q5JT82 389 aaPredicted RBP11.24□□□□□ -0.61
PCDHGA3-202ENST00000612467 GBGT1Q8N5D6 347 aa11.24□□□□□ -0.61
PCDHGA3-202ENST00000612467 OR4A5Q8NH83 315 aa11.24□□□□□ -0.61
PCDHGA3-202ENST00000612467 RNASEH2CQ8TDP1 164 aaKnown RBP11.24□□□□□ -0.61
PCDHGA3-202ENST00000612467 RPEQ96AT9 228 aa11.24□□□□□ -0.61
PCDHGA3-202ENST00000612467 FXYD5Q96DB9 178 aa11.24□□□□□ -0.61
PCDHGA3-202ENST00000612467 ASCL2Q99929 193 aa11.24□□□□□ -0.61
PCDHGA3-202ENST00000612467 ATG101Q9BSB4 218 aa11.24□□□□□ -0.61
PCDHGA3-202ENST00000612467 ISLRO14498 428 aa11.24□□□□□ -0.61
PCDHGA3-202ENST00000612467 TIGITQ495A1 244 aa11.24□□□□□ -0.61
PCDHGA3-202ENST00000612467 C8orf31Q8N9H6 132 aa11.24□□□□□ -0.61
PCDHGA3-202ENST00000612467 TEX22C9J3V5 150 aa11.23□□□□□ -0.61
PCDHGA3-202ENST00000612467 TIMM23O14925 209 aa11.23□□□□□ -0.61
PCDHGA3-202ENST00000612467 CRYGBP07316 175 aa11.23□□□□□ -0.61
PCDHGA3-202ENST00000612467 SUB1P53999 127 aaKnown RBP eCLIP11.23□□□□□ -0.61
PCDHGA3-202ENST00000612467 PLGLAQ15195 96 aa11.23□□□□□ -0.61
PCDHGA3-202ENST00000612467 FAM71F2Q6NXP2 309 aa11.23□□□□□ -0.61
PCDHGA3-202ENST00000612467 ZNF329Q86UD4 541 aa11.23□□□□□ -0.61
PCDHGA3-202ENST00000612467 PPP1R27Q86WC6 154 aa11.23□□□□□ -0.61
PCDHGA3-202ENST00000612467 RBM14Q96PK6 669 aaKnown RBP11.23□□□□□ -0.61
PCDHGA3-202ENST00000612467 AMMECR1Q9Y4X0 333 aaPredicted RBP11.23□□□□□ -0.61
PCDHGA3-202ENST00000612467 A0A1W2PPR1 153 aa11.23□□□□□ -0.61
PCDHGA3-202ENST00000612467 CORTO00230 105 aa11.23□□□□□ -0.61
PCDHGA3-202ENST00000612467 LGALS7P47929 136 aa11.23□□□□□ -0.61
PCDHGA3-202ENST00000612467 COMPP49747 757 aaPredicted RBP11.23□□□□□ -0.61
PCDHGA3-202ENST00000612467 RAB4BP61018 213 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms