RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ADTRPQ96IZ2 230 aa11.38□□□□□ -0.59
COL6A1-207ENST00000612273 LYNX1G3V0Z9 82 aa11.38□□□□□ -0.59
COL6A1-207ENST00000612273 HSBP1O75506 76 aa11.38□□□□□ -0.59
COL6A1-207ENST00000612273 SLC25A5P05141 298 aaKnown RBP11.38□□□□□ -0.59
COL6A1-207ENST00000612273 RPLP1P05386 114 aaKnown RBP11.38□□□□□ -0.59
COL6A1-207ENST00000612273 C3orf79P0CE67 100 aa11.38□□□□□ -0.59
COL6A1-207ENST00000612273 LYNX1P0DP58 116 aa11.38□□□□□ -0.59
COL6A1-207ENST00000612273 LINC00305Q7Z4B0 112 aa11.38□□□□□ -0.59
COL6A1-207ENST00000612273 SLC25A2Q9BXI2 301 aa11.38□□□□□ -0.59
COL6A1-207ENST00000612273 ANKHD1Q8IWZ3 2542 aaKnown RBP11.38□□□□□ -0.59
COL6A1-207ENST00000612273 OR1L8Q8NGR8 309 aa11.38□□□□□ -0.59
COL6A1-207ENST00000612273 ZNF430Q9H8G1 570 aaPredicted RBP11.38□□□□□ -0.59
COL6A1-207ENST00000612273 PGPA6NDG6 321 aa11.37□□□□□ -0.59
COL6A1-207ENST00000612273 CNTFRP26992 372 aa11.37□□□□□ -0.59
COL6A1-207ENST00000612273 COMPP49747 757 aaPredicted RBP11.37□□□□□ -0.59
COL6A1-207ENST00000612273 TMEM200BQ69YZ2 307 aa11.37□□□□□ -0.59
COL6A1-207ENST00000612273 BORCS7Q96B45 105 aa11.37□□□□□ -0.59
COL6A1-207ENST00000612273 SFXN3Q9BWM7 321 aa11.37□□□□□ -0.59
COL6A1-207ENST00000612273 GNB1LQ9BYB4 327 aa11.37□□□□□ -0.59
COL6A1-207ENST00000612273 TRAV8-1A0A0A6YYK1 113 aa11.37□□□□□ -0.59
COL6A1-207ENST00000612273 UBE2G1P62253 170 aa11.37□□□□□ -0.59
COL6A1-207ENST00000612273 TNXAQ16473 311 aa11.37□□□□□ -0.59
COL6A1-207ENST00000612273 PATE2Q6UY27 113 aa11.37□□□□□ -0.59
COL6A1-207ENST00000612273 Q71RC1 249 aaPredicted RBP11.37□□□□□ -0.59
COL6A1-207ENST00000612273 ZNF714Q96N38 554 aa11.37□□□□□ -0.59
COL6A1-207ENST00000612273 RALYQ9UKM9 306 aaKnown RBP11.37□□□□□ -0.59
COL6A1-207ENST00000612273 ZNF835Q9Y2P0 537 aa11.37□□□□□ -0.59
COL6A1-207ENST00000612273 S4R3C0 116 aa11.37□□□□□ -0.59
COL6A1-207ENST00000612273 HIGD1CA8MV81 97 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 CFHR2P36980 270 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 HINT1P49773 126 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-207ENST00000612273 CR1LQ2VPA4 569 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 TEX43Q6ZNM6 134 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 NUDT10Q8NFP7 164 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 NUDT11Q96G61 164 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 CLEC5AQ9NY25 188 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 MBD3L4A6NDZ8 208 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-207ENST00000612273 MBD3L3A6NE82 208 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-207ENST00000612273 MBD3L5A6NJ08 208 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-207ENST00000612273 H0YJW9 148 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 AMY1AP04745 511 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 PPOXP50336 477 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 RPL19P84098 196 aaKnown RBP11.36□□□□□ -0.59
COL6A1-207ENST00000612273 C21orf62-AS1Q17RA5 79 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 MBD3L2Q8NHZ7 208 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-207ENST00000612273 FAM167A-AS1Q96KT0 104 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 SSUH2Q9Y2M2 353 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 KLK10O43240 276 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 ZNF324O75467 553 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-207ENST00000612273 FCN3O75636 299 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 FOSL1P15407 271 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 GDF5OSQ5U4N7 250 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 TSKUQ8WUA8 353 aa11.36□□□□□ -0.59
COL6A1-207ENST00000612273 DPRXA6NFQ7 191 aa11.35□□□□□ -0.59
COL6A1-207ENST00000612273 DMRTA1Q5VZB9 504 aa11.35□□□□□ -0.59
COL6A1-207ENST00000612273 NUP35Q8NFH5 326 aa11.35□□□□□ -0.59
COL6A1-207ENST00000612273 OR5B3Q8NH48 314 aa11.35□□□□□ -0.59
COL6A1-207ENST00000612273 KCNS1Q96KK3 526 aa11.35□□□□□ -0.59
COL6A1-207ENST00000612273 TPPP3Q9BW30 176 aa11.35□□□□□ -0.59
COL6A1-207ENST00000612273 OSTCQ9NRP0 149 aa11.35□□□□□ -0.59
COL6A1-207ENST00000612273 DSCAML1Q8TD84 2053 aa11.35□□□□□ -0.59
COL6A1-207ENST00000612273 IGLV3-9A0A075B6K5 115 aa11.35□□□□□ -0.59
COL6A1-207ENST00000612273 NKX6-3A6NJ46 265 aa11.35□□□□□ -0.59
COL6A1-207ENST00000612273 DLL1O00548 723 aa11.35□□□□□ -0.59
COL6A1-207ENST00000612273 FAM87AP0C7U9 286 aa11.35□□□□□ -0.59
COL6A1-207ENST00000612273 ZNF138P52744 262 aa11.35□□□□□ -0.59
COL6A1-207ENST00000612273 BSPH1Q075Z2 132 aa11.35□□□□□ -0.59
COL6A1-207ENST00000612273 C2orf83Q53S99 150 aa11.35□□□□□ -0.59
COL6A1-207ENST00000612273 GOLT1BQ9Y3E0 138 aa11.35□□□□□ -0.59
COL6A1-207ENST00000612273 M0R2Z0 102 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 PEX7O00628 323 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 CSN3P07498 182 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 WDR73Q6P4I2 378 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 CLEC7AQ9BXN2 247 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 LPAR2Q9HBW0 351 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 RAB9BQ9NP90 201 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 COX7A1P24310 79 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 C1orf185Q5T7R7 199 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.34□□□□□ -0.59
COL6A1-207ENST00000612273 LOXL4Q96JB6 756 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 PGLYRP4Q96LB8 373 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 NDUFA4L2Q9NRX3 87 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 HNRNPA3P51991 378 aaKnown RBP11.34□□□□□ -0.59
COL6A1-207ENST00000612273 Q0VG73 95 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 SPACA3Q8IXA5 215 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 C18orf32Q8TCD1 76 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 GAL3ST2Q9H3Q3 398 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 TNFRSF19Q9NS68 423 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 ZNF257Q9Y2Q1 563 aa11.34□□□□□ -0.59
COL6A1-207ENST00000612273 RAI1Q7Z5J4 1906 aaPredicted RBP11.34□□□□□ -0.59
COL6A1-207ENST00000612273 A0A1W2PRE2 83 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 TCTAP57738 103 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 NIT1Q86X76 327 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 C11orf42Q8N5U0 333 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 IGF2BP2-AS1Q96M15 143 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 RNF2Q99496 336 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 PMCHL2Q9BQD1 86 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 DYNLRB1Q9NP97 96 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 A0A1W2PPI3 338 aa11.33□□□□□ -0.6
COL6A1-207ENST00000612273 VWC2LB2RUY7 222 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms