RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 UQCR10Q9UDW1 63 aa7.09□□□□□ -1.28
LIG4-204ENST00000611712 Q9UFV3 132 aa7.09□□□□□ -1.28
LIG4-204ENST00000611712 S4R3C0 116 aa7.09□□□□□ -1.28
LIG4-204ENST00000611712 EXPH5Q8NEV8 1989 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 PRUNE2Q8WUY3 3088 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 FAM87AP0C7U9 286 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 FOSL1P15407 271 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 COMPP49747 757 aaPredicted RBP7.08□□□□□ -1.28
LIG4-204ENST00000611712 TMEM167AQ8TBQ9 72 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 SRSF12Q8WXF0 261 aaKnown RBP7.08□□□□□ -1.28
LIG4-204ENST00000611712 LINC00479Q96M42 142 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 GPR82Q96P67 336 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 SSBP4Q9BWG4 385 aaPredicted RBP7.08□□□□□ -1.28
LIG4-204ENST00000611712 ATG2AQ2TAZ0 1938 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 LIPFP07098 398 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 HBBP68871 147 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 LYPD2Q6UXB3 125 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 C19orf35Q6ZS72 473 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 MAP1LC3CQ9BXW4 147 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 LY96Q9Y6Y9 160 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 IGLV3-9A0A075B6K5 115 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.08□□□□□ -1.28
LIG4-204ENST00000611712 IL4P05112 153 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 PMCHL1Q16048 86 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 DNLZQ5SXM8 178 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 PPP1R27Q86WC6 154 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 NEUROG1Q92886 237 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 PYGO2Q9BRQ0 406 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 EPDR1Q9UM22 224 aa7.08□□□□□ -1.28
LIG4-204ENST00000611712 SRRM4A7MD48 611 aaKnown RBP7.07□□□□□ -1.28
LIG4-204ENST00000611712 OR5AL1P0C617 328 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 BRWD1-AS2P59051 145 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 TCF24Q7RTU0 167 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 ST6GALNAC3Q8NDV1 305 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 KCNS1Q96KK3 526 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 PRDM13Q9H4Q3 707 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 CDC42EP3Q9UKI2 254 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 CHD3Q12873 2000 aaKnown RBP7.07□□□□□ -1.28
LIG4-204ENST00000611712 IFITM10A6NMD0 228 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 FNDC10F2Z333 226 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 LEPROTL1O95214 131 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 ARL3P36405 182 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 NHLH1Q02575 133 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 NUP37Q8NFH4 326 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 NEU1Q99519 415 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 Q9H3A6 140 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 CCDC144NLQ6NUI1 221 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 LURAP1LQ8IV03 231 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 NCOR1P1Q9H4R4 102 aa7.07□□□□□ -1.28
LIG4-204ENST00000611712 ORM1P02763 201 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 P0C879 139 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 IGHV1-8P0DP01 117 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 HINT1P49773 126 aaPredicted RBP7.06□□□□□ -1.28
LIG4-204ENST00000611712 CX3CL1P78423 397 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 MSMPQ1L6U9 139 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 RPP21Q9H633 154 aaKnown RBP7.06□□□□□ -1.28
LIG4-204ENST00000611712 C1RLQ9NZP8 487 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 IGHV3-35A0A0C4DH35 117 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 A8MWP6 167 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 PROP1O75360 226 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 ZNF324O75467 553 aaPredicted RBP7.06□□□□□ -1.28
LIG4-204ENST00000611712 PTTG1IPP53801 180 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 TMPRSS3P57727 454 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 PRR31Q5SQ13 230 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 C1orf194Q5T5A4 169 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 IGFL2Q6UWQ7 119 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 PIP4P1Q86T03 277 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 TEX45Q8NA69 505 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 NUDT10Q8NFP7 164 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 Q8TCH9 128 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 NUDT11Q96G61 164 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 MIEN1Q9BRT3 115 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 GSX1Q9H4S2 264 aaPredicted RBP7.06□□□□□ -1.28
LIG4-204ENST00000611712 PIEZO2Q9H5I5 2752 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 CLEC3BP05452 202 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 CD24P25063 80 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 PRSS8Q16651 343 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 ECSCRQ19T08 205 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 DPM3Q9P2X0 92 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 GOLT1BQ9Y3E0 138 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 TRIOO75962 3097 aa7.06□□□□□ -1.28
LIG4-204ENST00000611712 LOC389332A0A1B0GUA5 103 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 GGTLC3B5MD39 225 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 MFAP4P55083 255 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 PRR20EP86478 221 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 PRR20CP86479 221 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 PRR20DP86480 221 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 PRR20BP86481 221 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 PRR20AP86496 221 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 TMEM249Q2WGJ8 235 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 HSPB8Q9UJY1 196 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 LSM4Q9Y4Z0 139 aaKnown RBP7.05□□□□□ -1.28
LIG4-204ENST00000611712 PRB4P10163 310 aaPredicted RBP7.05□□□□□ -1.28
LIG4-204ENST00000611712 SCGB2A2Q13296 93 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 IGFL3Q6UXB1 125 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 C11orf42Q8N5U0 333 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 NDUFA4L2Q9NRX3 87 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 PPP1R14DQ9NXH3 145 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 LOC105371242A0A075B767 164 aa7.05□□□□□ -1.28
LIG4-204ENST00000611712 CEACAM8P31997 349 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms