RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	ZNF138	P52744	262 aa		11.43	□□□□□ -0.58
MUC1-223	ENST00000611571	REL	Q04864	619 aa	Predicted RBP	11.43	□□□□□ -0.58
MUC1-223	ENST00000611571	ZNF124	Q15973	351 aa		11.43	□□□□□ -0.58
MUC1-223	ENST00000611571	C1orf174	Q8IYL3	243 aa		11.43	□□□□□ -0.58
MUC1-223	ENST00000611571	ANAPC10	Q9UM13	185 aa		11.43	□□□□□ -0.58
MUC1-223	ENST00000611571	C7orf71	A4D174	169 aa		11.43	□□□□□ -0.58
MUC1-223	ENST00000611571	C19orf35	Q6ZS72	473 aa		11.43	□□□□□ -0.58
MUC1-223	ENST00000611571	FOXL2NB	Q6ZUU3	175 aa		11.43	□□□□□ -0.58
MUC1-223	ENST00000611571	GP6	Q9HCN6	339 aa		11.43	□□□□□ -0.58
MUC1-223	ENST00000611571	DCAF16	Q9NXF7	216 aa		11.43	□□□□□ -0.58
MUC1-223	ENST00000611571	LY6G6E	A0A0G2JKS1	128 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	SRRM5	B3KS81	715 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	GFRA3	O60609	400 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	FXYD7	P58549	80 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	ABHD17A	Q96GS6	310 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571		U3KQA8	63 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	OR2T8	A6NH00	312 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	CD69	Q07108	199 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	HAPLN4	Q86UW8	402 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	CLEC7A	Q9BXN2	247 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	C1RL	Q9NZP8	487 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571		A0A1B0GW64	132 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	CD59	P13987	128 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	KLF17	Q5JT82	389 aa	Predicted RBP	11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	C10orf91	Q5T1B1	145 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	ZNF114	Q8NC26	417 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	ELOVL5	Q9NYP7	299 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	ZFP30	Q9Y2G7	519 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571		A6NDN8	102 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	ETV2	O00321	342 aa	Predicted RBP	11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	ZNF324	O75467	553 aa	Predicted RBP	11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	IGHV2-5	P01817	119 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	COLCA1	Q6ZS62	124 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	WDR86	Q86TI4	376 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	NAA38	Q9BRA0	125 aa	Known RBP	11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	MRPL32	Q9BYC8	188 aa	Known RBP	11.42	□□□□□ -0.58
MUC1-223	ENST00000611571		Q9H3A6	140 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	SORL1	Q92673	2214 aa		11.42	□□□□□ -0.58
MUC1-223	ENST00000611571	IGKV1D-17	A0A075B6S4	117 aa		11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	C17orf100	A8MU93	164 aa		11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	PFN1	P07737	140 aa	Known RBP	11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	LYPD6	Q86Y78	171 aa		11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	GPR82	Q96P67	336 aa		11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	C19orf24	Q9BVV8	132 aa		11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	TRBV9	A0A0B4J1U6	114 aa		11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	IGKV3-15	P01624	115 aa		11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	C12orf54	Q6X4T0	127 aa		11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	MYOZ3	Q8TDC0	251 aa		11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	TANC1	Q9C0D5	1861 aa		11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	KIF26A	Q9ULI4	1882 aa	Predicted RBP	11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	OTOGL	Q3ZCN5	2332 aa		11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	UNC80	Q8N2C7	3258 aa		11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	SS18L1	O75177	396 aa	Predicted RBP	11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	IGHV1-46	P01743	117 aa		11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	OR10AG1	Q8NH19	301 aa		11.41	□□□□□ -0.58
MUC1-223	ENST00000611571	TRAV8-6	A0A0B4J262	113 aa		11.4	□□□□□ -0.58
MUC1-223	ENST00000611571		K7ERU9	68 aa		11.4	□□□□□ -0.58
MUC1-223	ENST00000611571	IGKV3-20	P01619	116 aa		11.4	□□□□□ -0.58
MUC1-223	ENST00000611571	MFAP4	P55083	255 aa		11.4	□□□□□ -0.58
MUC1-223	ENST00000611571	EXOC3-AS1	Q8N2X6	119 aa		11.4	□□□□□ -0.58
MUC1-223	ENST00000611571	GRAMD2B	Q96HH9	432 aa		11.4	□□□□□ -0.58
MUC1-223	ENST00000611571		H7C2G1	150 aa		11.4	□□□□□ -0.58
MUC1-223	ENST00000611571	IGHV2-70	P01814	119 aa		11.4	□□□□□ -0.58
MUC1-223	ENST00000611571	TMEM78	Q5T7P6	136 aa		11.4	□□□□□ -0.58
MUC1-223	ENST00000611571		A0A1B0GUT8	65 aa		11.39	□□□□□ -0.59
MUC1-223	ENST00000611571	IZUMO1R	A6ND01	250 aa		11.39	□□□□□ -0.59
MUC1-223	ENST00000611571	LY6H	O94772	140 aa		11.39	□□□□□ -0.59
MUC1-223	ENST00000611571	LY6E	Q16553	131 aa		11.39	□□□□□ -0.59
MUC1-223	ENST00000611571	RPRML	Q8N4K4	120 aa		11.39	□□□□□ -0.59
MUC1-223	ENST00000611571	DEFB104A	Q8WTQ1	72 aa		11.39	□□□□□ -0.59
MUC1-223	ENST00000611571	C16orf92	Q96LL3	132 aa		11.39	□□□□□ -0.59
MUC1-223	ENST00000611571	PF4V1	P10720	104 aa		11.39	□□□□□ -0.59
MUC1-223	ENST00000611571	RPP21	Q9H633	154 aa	Known RBP	11.39	□□□□□ -0.59
MUC1-223	ENST00000611571	LSM4	Q9Y4Z0	139 aa	Known RBP	11.39	□□□□□ -0.59
MUC1-223	ENST00000611571	NACA	E9PAV3	2078 aa		11.39	□□□□□ -0.59
MUC1-223	ENST00000611571	LOXL3	P58215	753 aa		11.39	□□□□□ -0.59
MUC1-223	ENST00000611571	PRCD	Q00LT1	54 aa		11.39	□□□□□ -0.59
MUC1-223	ENST00000611571	NUDT10	Q8NFP7	164 aa		11.39	□□□□□ -0.59
MUC1-223	ENST00000611571	NUDT11	Q96G61	164 aa		11.39	□□□□□ -0.59
MUC1-223	ENST00000611571	LOC107984156	A0A0G2JMH3	177 aa		11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	SFTA2	Q6UW10	78 aa		11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	ARL17A	Q8IVW1	177 aa		11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	DIRC2	Q96SL1	478 aa		11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	RPUSD1	Q9UJJ7	312 aa	Known RBP	11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	EPDR1	Q9UM22	224 aa		11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	LINC00312	Q9Y6C7	94 aa		11.38	□□□□□ -0.59
MUC1-223	ENST00000611571		H3BVH4	76 aa		11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	LIPF	P07098	398 aa		11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	CACNG8	Q8WXS5	425 aa		11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	LOXL4	Q96JB6	756 aa		11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	CDKN1A	P38936	164 aa		11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	FOXL1	Q12952	345 aa		11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	PRSS8	Q16651	343 aa		11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	FGF23	Q9GZV9	251 aa	Predicted RBP	11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	OSTC	Q9NRP0	149 aa		11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	TMEM160	Q9NX00	188 aa		11.38	□□□□□ -0.59
MUC1-223	ENST00000611571	CDC42EP3	Q9UKI2	254 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms