RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 IGKV1-17P01599 117 aa6.53□□□□□ -1.36
SNCA-212ENST00000611107 IFNA4P05014 189 aa6.53□□□□□ -1.36
SNCA-212ENST00000611107 FRMD6-AS1P0C7T7 363 aa6.53□□□□□ -1.36
SNCA-212ENST00000611107 IGLC1P0CG04 106 aa6.53□□□□□ -1.36
SNCA-212ENST00000611107 SLC25A4P12235 298 aa6.53□□□□□ -1.36
SNCA-212ENST00000611107 CXCL3P19876 107 aa6.53□□□□□ -1.36
SNCA-212ENST00000611107 NPBWR1P48145 328 aa6.53□□□□□ -1.36
SNCA-212ENST00000611107 ATP5IP56385 69 aaPredicted RBP6.53□□□□□ -1.36
SNCA-212ENST00000611107 ACOT7LQ6ZUV0 252 aa6.53□□□□□ -1.36
SNCA-212ENST00000611107 NOXA1Q86UR1 476 aa6.53□□□□□ -1.36
SNCA-212ENST00000611107 GPHB5Q86YW7 130 aa6.53□□□□□ -1.36
SNCA-212ENST00000611107 TMEM116Q8NCL8 245 aa6.53□□□□□ -1.36
SNCA-212ENST00000611107 OR11H7Q8NGC8 314 aa6.53□□□□□ -1.36
SNCA-212ENST00000611107 ZFAND3Q9H8U3 227 aa6.53□□□□□ -1.36
SNCA-212ENST00000611107 PSENENQ9NZ42 101 aa6.53□□□□□ -1.36
SNCA-212ENST00000611107 PAIP2BQ9ULR5 123 aaKnown RBP6.53□□□□□ -1.36
SNCA-212ENST00000611107 STRAPQ9Y3F4 350 aaKnown RBP6.53□□□□□ -1.36
SNCA-212ENST00000611107 RYR3Q15413 4870 aa6.53□□□□□ -1.36
SNCA-212ENST00000611107 IGKV1D-37A0A075B6S9 117 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 IGKV1OR2-108A0A075B7D4 117 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 C2orf70A6NJV1 201 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 H0YIZ8 118 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 NDUFA4O00483 81 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 NUPL2O15504 423 aaKnown RBP6.52□□□□□ -1.37
SNCA-212ENST00000611107 METTL15P1P0C7V9 234 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 IGHV4-30-4P0DP06 118 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 TAS2R30P59541 319 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 RAB11AP62491 216 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 GAMTQ14353 236 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 FCN2Q15485 313 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 TIGITQ495A1 244 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 CD300EQ496F6 205 aaPredicted RBP6.52□□□□□ -1.37
SNCA-212ENST00000611107 LRRC37A5PQ49AS3 106 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 TM4SF20Q53R12 229 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 ACY3Q96HD9 319 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 C19orf73Q9NVV2 129 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 GAR1Q9NY12 217 aaKnown RBP6.52□□□□□ -1.37
SNCA-212ENST00000611107 OR5AC2Q9NZP5 309 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 STARD9Q9P2P6 4700 aa6.52□□□□□ -1.37
SNCA-212ENST00000611107 IGSF23A1L1A6 192 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 DEDDO75618 318 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 SCAF4O95104 1147 aaKnown RBP6.51□□□□□ -1.37
SNCA-212ENST00000611107 CD7P09564 240 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 FOLR2P14207 255 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 OR10J1P30954 320 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 GPX4P36969 197 aaPredicted RBP6.51□□□□□ -1.37
SNCA-212ENST00000611107 RPP30P78346 268 aaKnown RBP6.51□□□□□ -1.37
SNCA-212ENST00000611107 RELQ04864 619 aaPredicted RBP6.51□□□□□ -1.37
SNCA-212ENST00000611107 ARL16Q0P5N6 197 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 DEFB114Q30KQ6 69 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 OR8G2PQ6IF36 304 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 ETFRF1Q6IPR1 90 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 ZNF600Q6ZNG1 722 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 PPP1R1CQ8WVI7 109 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 NPIPB3Q92617 1050 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 SLC35E1Q96K37 410 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 MED28Q9H204 178 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 LYRM2Q9NU23 88 aaPredicted RBP6.51□□□□□ -1.37
SNCA-212ENST00000611107 PEMTQ9UBM1 199 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 MLXQ9UH92 298 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 PUS1Q9Y606 427 aaKnown RBP eCLIP6.51□□□□□ -1.37
SNCA-212ENST00000611107 SMAD5-AS1Q9Y6J3 95 aa6.51□□□□□ -1.37
SNCA-212ENST00000611107 ZNF320A2RRD8 509 aa6.5□□□□□ -1.37
SNCA-212ENST00000611107 FAM24AA6NFZ4 105 aa6.5□□□□□ -1.37
SNCA-212ENST00000611107 L7N2F9 121 aa6.5□□□□□ -1.37
SNCA-212ENST00000611107 ZNF207O43670 478 aaKnown RBP6.5□□□□□ -1.37
SNCA-212ENST00000611107 MPC2O95563 127 aa6.5□□□□□ -1.37
SNCA-212ENST00000611107 CAV2P51636 162 aa6.5□□□□□ -1.37
SNCA-212ENST00000611107 RRAS2P62070 204 aaPredicted RBP6.5□□□□□ -1.37
SNCA-212ENST00000611107 VAMP2P63027 116 aa6.5□□□□□ -1.37
SNCA-212ENST00000611107 DLK1P80370 383 aa6.5□□□□□ -1.37
SNCA-212ENST00000611107 FAM106AQ4KMX7 169 aa6.5□□□□□ -1.37
SNCA-212ENST00000611107 TOMM20LQ6UXN7 152 aa6.5□□□□□ -1.37
SNCA-212ENST00000611107 THAP8Q8NA92 274 aa6.5□□□□□ -1.37
SNCA-212ENST00000611107 OR1S2Q8NGQ3 325 aa6.5□□□□□ -1.37
SNCA-212ENST00000611107 ELOVL1Q9BW60 279 aa6.5□□□□□ -1.37
SNCA-212ENST00000611107 RETNQ9HD89 108 aa6.5□□□□□ -1.37
SNCA-212ENST00000611107 DAZ1Q9NQZ3 744 aaKnown RBP6.5□□□□□ -1.37
SNCA-212ENST00000611107 SIGLEC8Q9NYZ4 499 aa6.5□□□□□ -1.37
SNCA-212ENST00000611107 MBD2Q9UBB5 411 aa6.5□□□□□ -1.37
SNCA-212ENST00000611107 U3KQK5 164 aa6.5□□□□□ -1.37
SNCA-212ENST00000611107 SACSQ9NZJ4 4579 aa6.49□□□□□ -1.37
SNCA-212ENST00000611107 TRAV30A0A087WSZ9 112 aa6.49□□□□□ -1.37
SNCA-212ENST00000611107 TRAV14DV4A0A0A6YYC5 116 aa6.49□□□□□ -1.37
SNCA-212ENST00000611107 RBMY1BA6NDE4 496 aaKnown RBP6.49□□□□□ -1.37
SNCA-212ENST00000611107 RBMY1EA6NEQ0 496 aaKnown RBP6.49□□□□□ -1.37
SNCA-212ENST00000611107 CST7O76096 145 aa6.49□□□□□ -1.37
SNCA-212ENST00000611107 RBMY1DP0C7P1 496 aaKnown RBP6.49□□□□□ -1.37
SNCA-212ENST00000611107 C8orf88P0DMB2 117 aa6.49□□□□□ -1.37
SNCA-212ENST00000611107 PVALBP20472 110 aaPredicted RBP6.49□□□□□ -1.37
SNCA-212ENST00000611107 CBLN1P23435 193 aa6.49□□□□□ -1.37
SNCA-212ENST00000611107 ELLP55199 621 aaPredicted RBP6.49□□□□□ -1.37
SNCA-212ENST00000611107 YPEL3P61236 119 aaPredicted RBP6.49□□□□□ -1.37
SNCA-212ENST00000611107 CYCSP99999 105 aaKnown RBP6.49□□□□□ -1.37
SNCA-212ENST00000611107 AKR1C1Q04828 323 aa6.49□□□□□ -1.37
SNCA-212ENST00000611107 SLC38A11Q08AI6 406 aa6.49□□□□□ -1.37
SNCA-212ENST00000611107 BTNL8Q6UX41 500 aa6.49□□□□□ -1.37
SNCA-212ENST00000611107 TMEM61Q8N0U2 210 aa6.49□□□□□ -1.37
SNCA-212ENST00000611107 DEFB125Q8N687 156 aa6.49□□□□□ -1.37
SNCA-212ENST00000611107 TMEM252Q8N6L7 170 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms