RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 HIST1H2BBP33778 126 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 HIST1H2BDP58876 126 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 HIST1H2BCP62807 126 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 HIST2H2BEQ16778 126 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 ZXDCQ2QGD7 858 aaPredicted RBP10.92□□□□□ -0.66
USP6NL-205ENST00000609104 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.92□□□□□ -0.66
USP6NL-205ENST00000609104 HIST1H2BHQ93079 126 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 HIST1H2BNQ99877 126 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 HIST1H2BMQ99879 126 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 VGLL1Q99990 258 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 UPK2O00526 184 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 MORN2Q502X0 79 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 GGTLC3B5MD39 225 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 PSG8Q9UQ74 426 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 IGKV1D-13A0A0B4J2D9 117 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 IGKV1-13P0DP09 117 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 LINC00158P58513 81 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 ZNF497Q6ZNH5 498 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 LINC00312Q9Y6C7 94 aa10.92□□□□□ -0.66
USP6NL-205ENST00000609104 VDAC2P45880 294 aaPredicted RBP10.92□□□□□ -0.66
USP6NL-205ENST00000609104 M0R2P5 195 aa10.91□□□□□ -0.66
USP6NL-205ENST00000609104 A8MWV9 139 aa10.91□□□□□ -0.66
USP6NL-205ENST00000609104 TRGV4A0A0C4DH28 118 aa10.91□□□□□ -0.66
USP6NL-205ENST00000609104 TCRBV4S1A1TA0A5B7 111 aa10.91□□□□□ -0.66
USP6NL-205ENST00000609104 IGFBP3P17936 291 aaPredicted RBP10.91□□□□□ -0.66
USP6NL-205ENST00000609104 GATD1Q8NB37 220 aa10.91□□□□□ -0.66
USP6NL-205ENST00000609104 NBR2O15453 112 aa10.91□□□□□ -0.66
USP6NL-205ENST00000609104 YPEL1O60688 119 aa10.91□□□□□ -0.66
USP6NL-205ENST00000609104 HIST1H4AP62805 103 aaKnown RBP10.91□□□□□ -0.66
USP6NL-205ENST00000609104 EFNB3Q15768 340 aa10.91□□□□□ -0.66
USP6NL-205ENST00000609104 YPEL2Q96QA6 119 aa10.91□□□□□ -0.66
USP6NL-205ENST00000609104 NPIPB5A8MRT5 1133 aa10.91□□□□□ -0.66
USP6NL-205ENST00000609104 GAGE13Q4V321 117 aa10.91□□□□□ -0.66
USP6NL-205ENST00000609104 PLPPR1Q8TBJ4 325 aa10.91□□□□□ -0.66
USP6NL-205ENST00000609104 GREB1LQ9C091 1923 aaPredicted RBP10.91□□□□□ -0.66
USP6NL-205ENST00000609104 UBE2CO00762 179 aa10.91□□□□□ -0.66
USP6NL-205ENST00000609104 CD33P20138 364 aa10.91□□□□□ -0.66
USP6NL-205ENST00000609104 HEPN1Q6WQI6 88 aa10.91□□□□□ -0.66
USP6NL-205ENST00000609104 CHCHD1Q96BP2 118 aaKnown RBP10.91□□□□□ -0.66
USP6NL-205ENST00000609104 ERG28Q9UKR5 140 aa10.91□□□□□ -0.66
USP6NL-205ENST00000609104 CITED2Q99967 270 aaPredicted RBP10.91□□□□□ -0.66
USP6NL-205ENST00000609104 C17orf100A8MU93 164 aa10.9□□□□□ -0.66
USP6NL-205ENST00000609104 J3QW42 95 aa10.9□□□□□ -0.66
USP6NL-205ENST00000609104 IFI27L1Q96BM0 104 aa10.9□□□□□ -0.66
USP6NL-205ENST00000609104 ZDBF2Q9HCK1 2354 aa10.9□□□□□ -0.66
USP6NL-205ENST00000609104 GREM1O60565 184 aa10.9□□□□□ -0.66
USP6NL-205ENST00000609104 S100A7L2Q5SY68 101 aa10.9□□□□□ -0.66
USP6NL-205ENST00000609104 OSTCQ9NRP0 149 aa10.9□□□□□ -0.66
USP6NL-205ENST00000609104 C1orf162Q8NEQ5 155 aaPredicted RBP10.9□□□□□ -0.66
USP6NL-205ENST00000609104 RNF125Q96EQ8 232 aa10.9□□□□□ -0.66
USP6NL-205ENST00000609104 GTSCR1Q86UQ5 136 aa10.9□□□□□ -0.67
USP6NL-205ENST00000609104 CD300EQ496F6 205 aaPredicted RBP10.89□□□□□ -0.67
USP6NL-205ENST00000609104 DYSFO75923 2080 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 ORMDL2Q53FV1 153 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 FAM57AQ8TBR7 257 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 NDUFS8O00217 210 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 OR10W1Q8NGF6 305 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 DMRTC2Q8IXT2 367 aaPredicted RBP10.89□□□□□ -0.67
USP6NL-205ENST00000609104 SLC25A28Q96A46 364 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 IGLV3-21P80748 117 aaPredicted RBP10.89□□□□□ -0.67
USP6NL-205ENST00000609104 LAGE3Q14657 143 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 GP6Q9HCN6 339 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 CRPP02741 224 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 ZFAND6Q6FIF0 208 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 LYZL4Q96KX0 146 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 TRBV6-7A0A0A0MS04 114 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 BTCP35070 178 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 FOXD3Q9UJU5 478 aaPredicted RBP10.89□□□□□ -0.67
USP6NL-205ENST00000609104 RHOGP84095 191 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 ZNF415Q09FC8 603 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 OR9G9P0C7N8 305 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 MYOD1P15172 320 aa10.89□□□□□ -0.67
USP6NL-205ENST00000609104 HIST1H2BLQ99880 126 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 WFDC1Q9HC57 220 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 ZCCHC24Q8N2G6 241 aaKnown RBP10.88□□□□□ -0.67
USP6NL-205ENST00000609104 EPOPA6NHQ4 379 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 F2Z2F3 143 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 EDA2RQ9HAV5 297 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 IGKV2-40A0A087WW87 121 aaPredicted RBP10.88□□□□□ -0.67
USP6NL-205ENST00000609104 IGHV3-73A0A0B4J1V6 119 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 IGKV2D-40P01614 121 aaPredicted RBP10.88□□□□□ -0.67
USP6NL-205ENST00000609104 CDKN1AP38936 164 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 C11orf44Q8N8P7 122 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 OR9G4Q8NGQ1 327 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 SLC50A1Q9BRV3 221 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 TMEM8BA6NDV4 472 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 TMEM86BQ8N661 226 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 C8orf46Q8TAG6 207 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 ZNF479Q96JC4 524 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 A0A1B0GTI1 187 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 ATXN8Q156A1 80 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 NAA38Q9BRA0 125 aaKnown RBP10.88□□□□□ -0.67
USP6NL-205ENST00000609104 CST9LQ9H4G1 147 aa10.88□□□□□ -0.67
USP6NL-205ENST00000609104 A0A0A6YYD4 124 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 TRAV5A0A0B4J249 113 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 F8VVB4 439 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 F8VWA3 439 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 TGFBR3LH3BV60 316 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 PVRIGQ6DKI7 326 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 C9orf106Q8NAJ2 232 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms