RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TANC2Q9HCD6 1990 aa18.09■□□□□ 0.49
SHANK2-220ENST00000608988 DSCAML1Q8TD84 2053 aa18.08■□□□□ 0.49
SHANK2-220ENST00000608988 MYO15AQ9UKN7 3530 aa18.08■□□□□ 0.49
SHANK2-220ENST00000608988 OR4C46A6NHA9 309 aa18.08■□□□□ 0.49
SHANK2-220ENST00000608988 SPRY3O43610 288 aa18.08■□□□□ 0.49
SHANK2-220ENST00000608988 SPRNQ5BIV9 151 aa18.08■□□□□ 0.49
SHANK2-220ENST00000608988 OR5AN1Q8NGI8 311 aa18.08■□□□□ 0.49
SHANK2-220ENST00000608988 RNASE8Q8TDE3 154 aaKnown RBP18.08■□□□□ 0.49
SHANK2-220ENST00000608988 ETFRF1Q6IPR1 90 aa18.07■□□□□ 0.48
SHANK2-220ENST00000608988 URB1-AS1Q96HZ7 61 aa18.07■□□□□ 0.48
SHANK2-220ENST00000608988 TMEM191AQ9H0A3 160 aa18.07■□□□□ 0.48
SHANK2-220ENST00000608988 SYS1-DBNDD2H3BUS1 97 aa18.07■□□□□ 0.48
SHANK2-220ENST00000608988 CAMPP49913 170 aa18.07■□□□□ 0.48
SHANK2-220ENST00000608988 RHOGP84095 191 aa18.07■□□□□ 0.48
SHANK2-220ENST00000608988 MEF2CQ06413 473 aaPredicted RBP18.07■□□□□ 0.48
SHANK2-220ENST00000608988 C21orf62-AS1Q17RA5 79 aa18.07■□□□□ 0.48
SHANK2-220ENST00000608988 TIMM23BQ5SRD1 257 aa18.07■□□□□ 0.48
SHANK2-220ENST00000608988 ZCCHC24Q8N2G6 241 aaKnown RBP18.07■□□□□ 0.48
SHANK2-220ENST00000608988 RBMXL3Q8N7X1 1067 aaKnown RBP18.07■□□□□ 0.48
SHANK2-220ENST00000608988 IGKV1D-37A0A075B6S9 117 aa18.06■□□□□ 0.48
SHANK2-220ENST00000608988 HLA-DRB1P01911 266 aa18.06■□□□□ 0.48
SHANK2-220ENST00000608988 SLC25A5P05141 298 aaKnown RBP18.06■□□□□ 0.48
SHANK2-220ENST00000608988 CD59P13987 128 aa18.06■□□□□ 0.48
SHANK2-220ENST00000608988 GPR6P46095 362 aaPredicted RBP18.06■□□□□ 0.48
SHANK2-220ENST00000608988 ATP1A1-AS1Q5TC04 95 aa18.06■□□□□ 0.48
SHANK2-220ENST00000608988 PRR27Q6MZM9 219 aa18.06■□□□□ 0.48
SHANK2-220ENST00000608988 SSX8Q7RTT4 187 aa18.06■□□□□ 0.48
SHANK2-220ENST00000608988 OR4C5Q8NGB2 326 aa18.06■□□□□ 0.48
SHANK2-220ENST00000608988 SSBP4Q9BWG4 385 aaPredicted RBP18.06■□□□□ 0.48
SHANK2-220ENST00000608988 LOC105371242A0A075B767 164 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 LPAL2Q16609 132 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 TEX36Q5VZQ5 186 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 IGFL2Q6UWQ7 119 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 PET117Q6UWS5 81 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 NPIPB3Q92617 1050 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 FLYWCH2Q96CP2 140 aaKnown RBP18.05■□□□□ 0.48
SHANK2-220ENST00000608988 NDFIP1Q9BT67 221 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 MRPL20Q9BYC9 149 aaKnown RBP18.05■□□□□ 0.48
SHANK2-220ENST00000608988 MS4A6AQ9H2W1 248 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 TRAV17A0A0B4J275 112 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 C19orf71A6NCJ1 209 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 HSBP1L1C9JCN9 74 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 LIPFP07098 398 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 C12orf54Q6X4T0 127 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 ZNF841Q6ZN19 808 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 C5orf17Q8NAS9 161 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 OR10X1Q8NGY0 326 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 ARRDC1-AS1Q9H2J1 176 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 SSUH2Q9Y2M2 353 aa18.05■□□□□ 0.48
SHANK2-220ENST00000608988 VWC2LB2RUY7 222 aa18.04■□□□□ 0.48
SHANK2-220ENST00000608988 TNFAIP6P98066 277 aaPredicted RBP18.04■□□□□ 0.48
SHANK2-220ENST00000608988 SLC25A34Q6PIV7 304 aa18.04■□□□□ 0.48
SHANK2-220ENST00000608988 RBPMS2Q6ZRY4 209 aaKnown RBP18.04■□□□□ 0.48
SHANK2-220ENST00000608988 LINC00305Q7Z4B0 112 aa18.04■□□□□ 0.48
SHANK2-220ENST00000608988 OR4C13Q8NGP0 309 aa18.04■□□□□ 0.48
SHANK2-220ENST00000608988 FNDC4Q9H6D8 234 aaPredicted RBP18.04■□□□□ 0.48
SHANK2-220ENST00000608988 IGHV1-24A0A0C4DH33 117 aa18.03■□□□□ 0.48
SHANK2-220ENST00000608988 M0R1B8 84 aa18.03■□□□□ 0.48
SHANK2-220ENST00000608988 CORTO00230 105 aa18.03■□□□□ 0.48
SHANK2-220ENST00000608988 LEPROTL1O95214 131 aa18.03■□□□□ 0.48
SHANK2-220ENST00000608988 LTAP01374 205 aa18.03■□□□□ 0.48
SHANK2-220ENST00000608988 P01737 135 aa18.03■□□□□ 0.48
SHANK2-220ENST00000608988 SPATA12Q7Z6I5 190 aa18.03■□□□□ 0.48
SHANK2-220ENST00000608988 C8orf31Q8N9H6 132 aa18.03■□□□□ 0.48
SHANK2-220ENST00000608988 TRGV9Q99603 122 aa18.03■□□□□ 0.48
SHANK2-220ENST00000608988 CCL13Q99616 98 aa18.03■□□□□ 0.48
SHANK2-220ENST00000608988 CLEC5AQ9NY25 188 aa18.03■□□□□ 0.48
SHANK2-220ENST00000608988 NCOR1O75376 2440 aa18.03■□□□□ 0.48
SHANK2-220ENST00000608988 SSBP2P81877 361 aaPredicted RBP18.03■□□□□ 0.48
SHANK2-220ENST00000608988 WT1-ASQ06250 92 aa18.03■□□□□ 0.48
SHANK2-220ENST00000608988 FAM201AQ5SY85 155 aa18.03■□□□□ 0.48
SHANK2-220ENST00000608988 PVRIGQ6DKI7 326 aa18.03■□□□□ 0.48
SHANK2-220ENST00000608988 PGPA6NDG6 321 aa18.02■□□□□ 0.48
SHANK2-220ENST00000608988 MBD3L4A6NDZ8 208 aaPredicted RBP18.02■□□□□ 0.48
SHANK2-220ENST00000608988 MBD3L3A6NE82 208 aaPredicted RBP18.02■□□□□ 0.48
SHANK2-220ENST00000608988 MBD3L5A6NJ08 208 aaPredicted RBP18.02■□□□□ 0.48
SHANK2-220ENST00000608988 GNG5P63218 68 aa18.02■□□□□ 0.48
SHANK2-220ENST00000608988 DUX4L9Q6RFH8 374 aaPredicted RBP18.02■□□□□ 0.48
SHANK2-220ENST00000608988 KIR3DL3Q8N743 410 aa18.02■□□□□ 0.48
SHANK2-220ENST00000608988 MBD3L2Q8NHZ7 208 aaPredicted RBP18.02■□□□□ 0.48
SHANK2-220ENST00000608988 GSX1Q9H4S2 264 aaPredicted RBP18.02■□□□□ 0.48
SHANK2-220ENST00000608988 CACNA1GO43497 2377 aa18.02■□□□□ 0.48
SHANK2-220ENST00000608988 MOSP00540 346 aa18.01■□□□□ 0.47
SHANK2-220ENST00000608988 CRYGCP07315 174 aa18.01■□□□□ 0.47
SHANK2-220ENST00000608988 RND1Q92730 232 aa18.01■□□□□ 0.47
SHANK2-220ENST00000608988 PMCHL2Q9BQD1 86 aa18.01■□□□□ 0.47
SHANK2-220ENST00000608988 HSPB8Q9UJY1 196 aa18.01■□□□□ 0.47
SHANK2-220ENST00000608988 CGB1A6NKQ9 187 aa18.01■□□□□ 0.47
SHANK2-220ENST00000608988 NPIPB6E9PJ23 425 aa18.01■□□□□ 0.47
SHANK2-220ENST00000608988 IGHV1-46P01743 117 aa18.01■□□□□ 0.47
SHANK2-220ENST00000608988 VAMP3Q15836 100 aa18.01■□□□□ 0.47
SHANK2-220ENST00000608988 TCF24Q7RTU0 167 aa18.01■□□□□ 0.47
SHANK2-220ENST00000608988 LINC00311Q8N616 119 aa18.01■□□□□ 0.47
SHANK2-220ENST00000608988 DEFB125Q8N687 156 aa18.01■□□□□ 0.47
SHANK2-220ENST00000608988 FAM216BQ8N7L0 139 aa18.01■□□□□ 0.47
SHANK2-220ENST00000608988 DAZAP1Q96EP5 407 aaKnown RBP18.01■□□□□ 0.47
SHANK2-220ENST00000608988 MAP1LC3CQ9BXW4 147 aa18.01■□□□□ 0.47
SHANK2-220ENST00000608988 LOC102724200A0A096LPH7 203 aaPredicted RBP18■□□□□ 0.47
SHANK2-220ENST00000608988 NBEAP1P0C6P0 100 aa18■□□□□ 0.47
SHANK2-220ENST00000608988 PAX2Q02962 417 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms