RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 TM2D3Q9BRN9 247 aa7.48□□□□□ -1.21
CTSA-215ENST00000607187 SLC25A32Q9H2D1 315 aa7.48□□□□□ -1.21
CTSA-215ENST00000607187 FNDC4Q9H6D8 234 aaPredicted RBP7.48□□□□□ -1.21
CTSA-215ENST00000607187 TUBA4BQ9H853 241 aa7.48□□□□□ -1.21
CTSA-215ENST00000607187 DNAH7Q8WXX0 4024 aa7.48□□□□□ -1.21
CTSA-215ENST00000607187 A0A1B0GU03 582 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 DUXBA0A1W2PPF3 345 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 CEBPZOSA8MTT3 80 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 OR11H12B2RN74 326 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 ZNF207O43670 478 aaKnown RBP7.47□□□□□ -1.21
CTSA-215ENST00000607187 SCAF4O95104 1147 aaKnown RBP7.47□□□□□ -1.21
CTSA-215ENST00000607187 TMEM50AO95807 157 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 OPRK1P41145 380 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 INPP1P49441 399 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 TNFRSF9Q07011 255 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 PPP1R1AQ13522 171 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 MLANAQ16655 118 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 ANKRD55Q3KP44 614 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 C2orf83Q53S99 150 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 TRIQKQ629K1 86 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 LINC00322Q6ZN03 302 aaPredicted RBP7.47□□□□□ -1.21
CTSA-215ENST00000607187 RBPMS2Q6ZRY4 209 aaKnown RBP7.47□□□□□ -1.21
CTSA-215ENST00000607187 CENPSQ8N2Z9 138 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 LRTM2Q8N967 370 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 SLC24A4Q8NFF2 622 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 OR4X1Q8NH49 305 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 FAM30AQ9NZY2 134 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 MRPL36Q9P0J6 103 aaKnown RBP7.47□□□□□ -1.21
CTSA-215ENST00000607187 HSPB7Q9UBY9 170 aa7.47□□□□□ -1.21
CTSA-215ENST00000607187 B5MCH6 92 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 TSPAN4O14817 238 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 PITX3O75364 302 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 CLN5O75503 358 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 YIF1AO95070 293 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 NDUFB6O95139 128 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 NXPH3O95157 252 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 SFT2D2O95562 160 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 IL7P13232 177 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 UBE2MP61081 183 aaKnown RBP7.46□□□□□ -1.22
CTSA-215ENST00000607187 HAGHQ16775 308 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 TOMM20LQ6UXN7 152 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 SLC16A13Q7RTY0 426 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 DEFB125Q8N687 156 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 TMEM116Q8NCL8 245 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 OR52B4Q8NGK2 314 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 RNASEH2CQ8TDP1 164 aaKnown RBP7.46□□□□□ -1.22
CTSA-215ENST00000607187 TMEM170AQ8WVE7 144 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 RCHY1Q96PM5 261 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 SPAG8Q99932 426 aaPredicted RBP7.46□□□□□ -1.22
CTSA-215ENST00000607187 WFDC10AQ9H1F0 79 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 HIPK2Q9H2X6 1198 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 SMPXQ9UHP9 88 aa7.46□□□□□ -1.22
CTSA-215ENST00000607187 TRAV14DV4A0A0A6YYC5 116 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 IGHV7-4-1A0A0J9YVY3 117 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 RPS10-NUDT3A0A1W2PQS6 291 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 RBMY1BA6NDE4 496 aaKnown RBP7.45□□□□□ -1.22
CTSA-215ENST00000607187 RBMY1EA6NEQ0 496 aaKnown RBP7.45□□□□□ -1.22
CTSA-215ENST00000607187 CHEK1O14757 476 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 RBMY1DP0C7P1 496 aaKnown RBP7.45□□□□□ -1.22
CTSA-215ENST00000607187 SLC25A6P12236 298 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 NPY1RP25929 384 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 BTCP35070 178 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 LAMTOR1Q6IAA8 161 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 ZNF600Q6ZNG1 722 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 NOXA1Q86UR1 476 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 OR1S1Q8NH92 325 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 RNF125Q96EQ8 232 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 C7orf50Q9BRJ6 194 aaKnown RBP7.45□□□□□ -1.22
CTSA-215ENST00000607187 RHPN1-AS1Q9BWJ2 59 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 RBKSQ9H477 322 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 SRD5A3Q9H8P0 318 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 TMED3Q9Y3Q3 217 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 PUS1Q9Y606 427 aaKnown RBP eCLIP7.45□□□□□ -1.22
CTSA-215ENST00000607187 U3KQ87 197 aa7.45□□□□□ -1.22
CTSA-215ENST00000607187 TRAV30A0A087WSZ9 112 aa7.44□□□□□ -1.22
CTSA-215ENST00000607187 LINC00854A0A1B0GVQ3 168 aa7.44□□□□□ -1.22
CTSA-215ENST00000607187 C9orf170A2RU37 121 aa7.44□□□□□ -1.22
CTSA-215ENST00000607187 CENPXA8MT69 81 aa7.44□□□□□ -1.22
CTSA-215ENST00000607187 IGKV1-17P01599 117 aa7.44□□□□□ -1.22
CTSA-215ENST00000607187 SLC25A4P12235 298 aa7.44□□□□□ -1.22
CTSA-215ENST00000607187 ATP5IP56385 69 aaPredicted RBP7.44□□□□□ -1.22
CTSA-215ENST00000607187 FAM90A2PQ658T7 463 aa7.44□□□□□ -1.22
CTSA-215ENST00000607187 PRSS54Q6PEW0 395 aa7.44□□□□□ -1.22
CTSA-215ENST00000607187 DTD1Q8TEA8 209 aa7.44□□□□□ -1.22
CTSA-215ENST00000607187 RNF2Q99496 336 aa7.44□□□□□ -1.22
CTSA-215ENST00000607187 SPATA25Q9BR10 227 aa7.44□□□□□ -1.22
CTSA-215ENST00000607187 GINS3Q9BRX5 216 aa7.44□□□□□ -1.22
CTSA-215ENST00000607187 VSIRQ9H7M9 311 aa7.44□□□□□ -1.22
CTSA-215ENST00000607187 FLVCR2Q9UPI3 526 aa7.44□□□□□ -1.22
CTSA-215ENST00000607187 CSMD3Q7Z407 3707 aa7.43□□□□□ -1.22
CTSA-215ENST00000607187 IGHV3-49A0A0A0MS15 119 aa7.43□□□□□ -1.22
CTSA-215ENST00000607187 FAM90A26D6RGX4 464 aa7.43□□□□□ -1.22
CTSA-215ENST00000607187 PLA2G10O15496 165 aa7.43□□□□□ -1.22
CTSA-215ENST00000607187 SCGB2A1O75556 95 aa7.43□□□□□ -1.22
CTSA-215ENST00000607187 IFNA10P01566 189 aa7.43□□□□□ -1.22
CTSA-215ENST00000607187 PLA2G1BP04054 148 aaKnown RBP7.43□□□□□ -1.22
CTSA-215ENST00000607187 IGLC1P0CG04 106 aa7.43□□□□□ -1.22
CTSA-215ENST00000607187 RND2P52198 227 aa7.43□□□□□ -1.22
CTSA-215ENST00000607187 DHRS2Q13268 280 aa7.43□□□□□ -1.22
CTSA-215ENST00000607187 TIGITQ495A1 244 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms