RNA–Protein interactions for RNA: ENST00000605875.1

CCDC12-213, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-213ENST00000605875 SMCO1Q147U7 214 aa13.42□□□□□ -0.26
CCDC12-213ENST00000605875 ZNF124Q15973 351 aa13.42□□□□□ -0.26
CCDC12-213ENST00000605875 TCF24Q7RTU0 167 aa13.42□□□□□ -0.26
CCDC12-213ENST00000605875 APRG1Q8IVJ8 170 aa13.42□□□□□ -0.26
CCDC12-213ENST00000605875 LGI3Q8N145 548 aa13.42□□□□□ -0.26
CCDC12-213ENST00000605875 FRAS1Q86XX4 4008 aa13.41□□□□□ -0.26
CCDC12-213ENST00000605875 IGKV1-17P01599 117 aa13.41□□□□□ -0.26
CCDC12-213ENST00000605875 RPL35AP18077 110 aaKnown RBP13.41□□□□□ -0.26
CCDC12-213ENST00000605875 CCR6P51684 374 aa13.41□□□□□ -0.26
CCDC12-213ENST00000605875 SPANXN2Q5MJ10 180 aa13.41□□□□□ -0.26
CCDC12-213ENST00000605875 FAM90A2PQ658T7 463 aa13.41□□□□□ -0.26
CCDC12-213ENST00000605875 LILRB2Q8N423 598 aa13.41□□□□□ -0.26
CCDC12-213ENST00000605875 STPG3Q8N7X2 389 aa13.41□□□□□ -0.26
CCDC12-213ENST00000605875 RNASEH2CQ8TDP1 164 aaKnown RBP13.41□□□□□ -0.26
CCDC12-213ENST00000605875 VSIRQ9H7M9 311 aa13.41□□□□□ -0.26
CCDC12-213ENST00000605875 HSPB7Q9UBY9 170 aa13.41□□□□□ -0.26
CCDC12-213ENST00000605875 KMT2AQ03164 3969 aa13.4□□□□□ -0.26
CCDC12-213ENST00000605875 KIR2DL5BA0A0G2JN68 375 aa13.4□□□□□ -0.26
CCDC12-213ENST00000605875 KIR2DL5BA0A0G2JPC4 375 aa13.4□□□□□ -0.26
CCDC12-213ENST00000605875 ATF4P18848 351 aaPredicted RBP13.4□□□□□ -0.26
CCDC12-213ENST00000605875 VAMP1P23763 118 aa13.4□□□□□ -0.26
CCDC12-213ENST00000605875 PRSS54Q6PEW0 395 aa13.4□□□□□ -0.26
CCDC12-213ENST00000605875 KIR2DL5AQ8N109 375 aa13.4□□□□□ -0.26
CCDC12-213ENST00000605875 KIR2DL5BQ8NHK3 375 aa13.4□□□□□ -0.26
CCDC12-213ENST00000605875 DTD1Q8TEA8 209 aa13.4□□□□□ -0.26
CCDC12-213ENST00000605875 RNF183Q96D59 192 aa13.4□□□□□ -0.26
CCDC12-213ENST00000605875 KRTAP17-1Q9BYP8 105 aa13.4□□□□□ -0.26
CCDC12-213ENST00000605875 SRRQ9GZT4 340 aa13.4□□□□□ -0.26
CCDC12-213ENST00000605875 RBKSQ9H477 322 aa13.4□□□□□ -0.26
CCDC12-213ENST00000605875 MAP6D1Q9H9H5 199 aa13.4□□□□□ -0.26
CCDC12-213ENST00000605875 DFFBO76075 338 aa13.39□□□□□ -0.27
CCDC12-213ENST00000605875 IFNA10P01566 189 aa13.39□□□□□ -0.27
CCDC12-213ENST00000605875 IGLC1P0CG04 106 aa13.39□□□□□ -0.27
CCDC12-213ENST00000605875 SLC25A4P12235 298 aa13.39□□□□□ -0.27
CCDC12-213ENST00000605875 OR10J1P30954 320 aa13.39□□□□□ -0.27
CCDC12-213ENST00000605875 TMEM128Q5BJH2 165 aa13.39□□□□□ -0.27
CCDC12-213ENST00000605875 TMEM217Q8N7C4 229 aa13.39□□□□□ -0.27
CCDC12-213ENST00000605875 OR1S1Q8NH92 325 aa13.39□□□□□ -0.27
CCDC12-213ENST00000605875 METTL26Q96S19 204 aa13.39□□□□□ -0.27
CCDC12-213ENST00000605875 MS4A6AQ9H2W1 248 aa13.39□□□□□ -0.27
CCDC12-213ENST00000605875 TMEM231Q9H6L2 316 aa13.39□□□□□ -0.27
CCDC12-213ENST00000605875 CACFD1Q9UGQ2 172 aa13.39□□□□□ -0.27
CCDC12-213ENST00000605875 RPL11P62913 178 aaKnown RBP13.38□□□□□ -0.27
CCDC12-213ENST00000605875 RPP25LQ8N5L8 163 aaKnown RBP13.38□□□□□ -0.27
CCDC12-213ENST00000605875 OR1S2Q8NGQ3 325 aa13.38□□□□□ -0.27
CCDC12-213ENST00000605875 DEDD2Q8WXF8 326 aa13.38□□□□□ -0.27
CCDC12-213ENST00000605875 ACY3Q96HD9 319 aa13.38□□□□□ -0.27
CCDC12-213ENST00000605875 SLC25A21Q9BQT8 299 aaPredicted RBP13.38□□□□□ -0.27
CCDC12-213ENST00000605875 TRAV30A0A087WSZ9 112 aa13.37□□□□□ -0.27
CCDC12-213ENST00000605875 DUXBA0A1W2PPF3 345 aa13.37□□□□□ -0.27
CCDC12-213ENST00000605875 NPPCP23582 126 aa13.37□□□□□ -0.27
CCDC12-213ENST00000605875 PAFAH1B2P68402 229 aa13.37□□□□□ -0.27
CCDC12-213ENST00000605875 PPP1R1AQ13522 171 aa13.37□□□□□ -0.27
CCDC12-213ENST00000605875 TRIQKQ629K1 86 aa13.37□□□□□ -0.27
CCDC12-213ENST00000605875 RABAC1Q9UI14 185 aa13.37□□□□□ -0.27
CCDC12-213ENST00000605875 DNASE2O00115 360 aaPredicted RBP13.36□□□□□ -0.27
CCDC12-213ENST00000605875 CD5P06127 495 aa13.36□□□□□ -0.27
CCDC12-213ENST00000605875 CRYBB3P26998 211 aa13.36□□□□□ -0.27
CCDC12-213ENST00000605875 P2RY1P47900 373 aa13.36□□□□□ -0.27
CCDC12-213ENST00000605875 INPP1P49441 399 aa13.36□□□□□ -0.27
CCDC12-213ENST00000605875 ETFRF1Q6IPR1 90 aa13.36□□□□□ -0.27
CCDC12-213ENST00000605875 NOXA1Q86UR1 476 aa13.36□□□□□ -0.27
CCDC12-213ENST00000605875 CENPSQ8N2Z9 138 aa13.36□□□□□ -0.27
CCDC12-213ENST00000605875 FAM24BQ8N5W8 94 aa13.36□□□□□ -0.27
CCDC12-213ENST00000605875 STXBP6Q8NFX7 210 aa13.36□□□□□ -0.27
CCDC12-213ENST00000605875 PHLDA1Q8WV24 401 aaPredicted RBP13.36□□□□□ -0.27
CCDC12-213ENST00000605875 NPIPB3Q92617 1050 aa13.36□□□□□ -0.27
CCDC12-213ENST00000605875 PIGBOS1A0A0B4J2F0 54 aa13.35□□□□□ -0.27
CCDC12-213ENST00000605875 A0A1W2PS18 150 aa13.35□□□□□ -0.27
CCDC12-213ENST00000605875 SFT2D2O95562 160 aa13.35□□□□□ -0.27
CCDC12-213ENST00000605875 IAPPP10997 89 aa13.35□□□□□ -0.27
CCDC12-213ENST00000605875 RBMS2Q15434 407 aaKnown RBP13.35□□□□□ -0.27
CCDC12-213ENST00000605875 BAK1Q16611 211 aa13.35□□□□□ -0.27
CCDC12-213ENST00000605875 LRTM2Q8N967 370 aa13.35□□□□□ -0.27
CCDC12-213ENST00000605875 NARS2Q96I59 477 aaKnown RBP13.35□□□□□ -0.27
CCDC12-213ENST00000605875 U3KQ87 197 aa13.35□□□□□ -0.27
CCDC12-213ENST00000605875 PITX3O75364 302 aa13.34□□□□□ -0.27
CCDC12-213ENST00000605875 DEDDO75618 318 aa13.34□□□□□ -0.27
CCDC12-213ENST00000605875 IFNA4P05014 189 aa13.34□□□□□ -0.27
CCDC12-213ENST00000605875 IL4P05112 153 aa13.34□□□□□ -0.27
CCDC12-213ENST00000605875 YPEL3P61236 119 aaPredicted RBP13.34□□□□□ -0.27
CCDC12-213ENST00000605875 USF2Q15853 346 aaPredicted RBP13.34□□□□□ -0.27
CCDC12-213ENST00000605875 LEMD1Q68G75 181 aa13.34□□□□□ -0.27
CCDC12-213ENST00000605875 Q8WTZ3 238 aa13.34□□□□□ -0.27
CCDC12-213ENST00000605875 DNAH10Q8IVF4 4471 aa13.34□□□□□ -0.27
CCDC12-213ENST00000605875 TRAV2A0A0B4J234 112 aa13.33□□□□□ -0.28
CCDC12-213ENST00000605875 LINC00854A0A1B0GVQ3 168 aa13.33□□□□□ -0.28
CCDC12-213ENST00000605875 HNRNPCP07910 306 aaKnown RBP eCLIP13.33□□□□□ -0.28
CCDC12-213ENST00000605875 CMC4P56277 68 aaPredicted RBP13.33□□□□□ -0.28
CCDC12-213ENST00000605875 DEFB131AP59861 70 aa13.33□□□□□ -0.28
CCDC12-213ENST00000605875 LGALS9CQ6DKI2 356 aa13.33□□□□□ -0.28
CCDC12-213ENST00000605875 HERC2O95714 4834 aa13.33□□□□□ -0.28
CCDC12-213ENST00000605875 TOMM40O96008 361 aa13.32□□□□□ -0.28
CCDC12-213ENST00000605875 HOXB5P09067 269 aa13.32□□□□□ -0.28
CCDC12-213ENST00000605875 GRAMD2BQ96HH9 432 aa13.32□□□□□ -0.28
CCDC12-213ENST00000605875 SDHCQ99643 169 aaPredicted RBP13.32□□□□□ -0.28
CCDC12-213ENST00000605875 CSTL1Q9H114 145 aa13.32□□□□□ -0.28
CCDC12-213ENST00000605875 PAIP2BQ9ULR5 123 aaKnown RBP13.32□□□□□ -0.28
CCDC12-213ENST00000605875 TMED3Q9Y3Q3 217 aa13.32□□□□□ -0.28
CCDC12-213ENST00000605875 K7EQG2 157 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms