RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 SCAF4O95104 1147 aaKnown RBP10.54□□□□□ -0.72
RNF40-212ENST00000602784 SIX6O95475 246 aa10.54□□□□□ -0.72
RNF40-212ENST00000602784 IGLC1P0CG04 106 aa10.54□□□□□ -0.72
RNF40-212ENST00000602784 C8orf88P0DMB2 117 aa10.54□□□□□ -0.72
RNF40-212ENST00000602784 FOLR2P14207 255 aa10.54□□□□□ -0.72
RNF40-212ENST00000602784 CBLN1P23435 193 aa10.54□□□□□ -0.72
RNF40-212ENST00000602784 OR10J1P30954 320 aa10.54□□□□□ -0.72
RNF40-212ENST00000602784 KRTAP10-11P60412 298 aa10.54□□□□□ -0.72
RNF40-212ENST00000602784 VAMP2P63027 116 aa10.54□□□□□ -0.72
RNF40-212ENST00000602784 RAB32Q13637 225 aa10.54□□□□□ -0.72
RNF40-212ENST00000602784 TM4SF20Q53R12 229 aa10.54□□□□□ -0.72
RNF40-212ENST00000602784 ADAMTSL5Q6ZMM2 481 aa10.54□□□□□ -0.72
RNF40-212ENST00000602784 OR2K2Q8NGT1 345 aa10.54□□□□□ -0.72
RNF40-212ENST00000602784 ACY3Q96HD9 319 aa10.54□□□□□ -0.72
RNF40-212ENST00000602784 TECRQ9NZ01 308 aaKnown RBP10.54□□□□□ -0.72
RNF40-212ENST00000602784 MRPL27Q9P0M9 148 aaKnown RBP10.54□□□□□ -0.72
RNF40-212ENST00000602784 MGAT4CQ9UBM8 478 aa10.54□□□□□ -0.72
RNF40-212ENST00000602784 LSM5Q9Y4Y9 91 aaKnown RBP10.54□□□□□ -0.72
RNF40-212ENST00000602784 FNDC10F2Z333 226 aa10.53□□□□□ -0.72
RNF40-212ENST00000602784 RLN2P04090 185 aa10.53□□□□□ -0.72
RNF40-212ENST00000602784 S100A10P60903 97 aa10.53□□□□□ -0.72
RNF40-212ENST00000602784 TOMM20LQ6UXN7 152 aa10.53□□□□□ -0.72
RNF40-212ENST00000602784 SORL1Q92673 2214 aa10.52□□□□□ -0.73
RNF40-212ENST00000602784 DEDDO75618 318 aa10.52□□□□□ -0.73
RNF40-212ENST00000602784 YIF1AO95070 293 aa10.52□□□□□ -0.73
RNF40-212ENST00000602784 METTL15P1P0C7V9 234 aa10.52□□□□□ -0.73
RNF40-212ENST00000602784 DLK1P80370 383 aa10.52□□□□□ -0.73
RNF40-212ENST00000602784 TIGITQ495A1 244 aa10.52□□□□□ -0.73
RNF40-212ENST00000602784 THAP8Q8NA92 274 aa10.52□□□□□ -0.73
RNF40-212ENST00000602784 OR10P1Q8NGE3 313 aa10.52□□□□□ -0.73
RNF40-212ENST00000602784 GINS3Q9BRX5 216 aa10.52□□□□□ -0.73
RNF40-212ENST00000602784 C20orf24Q9BUV8 137 aa10.52□□□□□ -0.73
RNF40-212ENST00000602784 GGACTQ9BVM4 153 aa10.52□□□□□ -0.73
RNF40-212ENST00000602784 MED28Q9H204 178 aa10.52□□□□□ -0.73
RNF40-212ENST00000602784 LYRM2Q9NU23 88 aaPredicted RBP10.52□□□□□ -0.73
RNF40-212ENST00000602784 PUS1Q9Y606 427 aaKnown RBP eCLIP10.52□□□□□ -0.73
RNF40-212ENST00000602784 FABP1P07148 127 aa10.51□□□□□ -0.73
RNF40-212ENST00000602784 RD3LP0DJH9 198 aa10.51□□□□□ -0.73
RNF40-212ENST00000602784 CAV2P51636 162 aa10.51□□□□□ -0.73
RNF40-212ENST00000602784 DEFA6Q01524 100 aa10.51□□□□□ -0.73
RNF40-212ENST00000602784 DEFB114Q30KQ6 69 aa10.51□□□□□ -0.73
RNF40-212ENST00000602784 OR8G2PQ6IF36 304 aa10.51□□□□□ -0.73
RNF40-212ENST00000602784 LCN12Q6JVE5 192 aa10.51□□□□□ -0.73
RNF40-212ENST00000602784 TMEM144Q7Z5S9 345 aa10.51□□□□□ -0.73
RNF40-212ENST00000602784 Q8WTZ3 238 aa10.51□□□□□ -0.73
RNF40-212ENST00000602784 PPP1R1CQ8WVI7 109 aa10.51□□□□□ -0.73
RNF40-212ENST00000602784 TRGV9Q99603 122 aa10.51□□□□□ -0.73
RNF40-212ENST00000602784 ZFAND3Q9H8U3 227 aa10.51□□□□□ -0.73
RNF40-212ENST00000602784 ZNF256Q9Y2P7 627 aaPredicted RBP10.51□□□□□ -0.73
RNF40-212ENST00000602784 IGKV1D-37A0A075B6S9 117 aa10.5□□□□□ -0.73
RNF40-212ENST00000602784 TRAV14DV4A0A0A6YYC5 116 aa10.5□□□□□ -0.73
RNF40-212ENST00000602784 ZFP92A6NM28 416 aa10.5□□□□□ -0.73
RNF40-212ENST00000602784 E5RGE8 158 aa10.5□□□□□ -0.73
RNF40-212ENST00000602784 TOMM40O96008 361 aa10.5□□□□□ -0.73
RNF40-212ENST00000602784 PET100P0DJ07 73 aa10.5□□□□□ -0.73
RNF40-212ENST00000602784 CXCL3P19876 107 aa10.5□□□□□ -0.73
RNF40-212ENST00000602784 BCAP31P51572 246 aa10.5□□□□□ -0.73
RNF40-212ENST00000602784 ACOT7LQ6ZUV0 252 aa10.5□□□□□ -0.73
RNF40-212ENST00000602784 DYNLRB2Q8TF09 96 aa10.5□□□□□ -0.73
RNF40-212ENST00000602784 ASB13Q8WXK3 278 aa10.5□□□□□ -0.73
RNF40-212ENST00000602784 SMPXQ9UHP9 88 aa10.5□□□□□ -0.73
RNF40-212ENST00000602784 IGKV1OR2-108A0A075B7D4 117 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 IGHV3OR16-8A0A075B7F1 116 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 IGHV7-4-1A0A0J9YVY3 117 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 CCNKO75909 580 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 MPC2O95563 127 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 PSG1P11464 419 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 EDN2P20800 178 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 P2RY1P47900 373 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 SULT1A1P50225 295 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 RRAS2P62070 204 aaPredicted RBP10.49□□□□□ -0.73
RNF40-212ENST00000602784 ARL16Q0P5N6 197 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 FCN2Q15485 313 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 CD300EQ496F6 205 aaPredicted RBP10.49□□□□□ -0.73
RNF40-212ENST00000602784 HAPLN4Q86UW8 402 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 TMEM252Q8N6L7 170 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 OR11H7Q8NGC8 314 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 RNF126Q9BV68 326 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 NPVFQ9HCQ7 196 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 AURKAIP1Q9NWT8 199 aaPredicted RBP10.49□□□□□ -0.73
RNF40-212ENST00000602784 MLXQ9UH92 298 aa10.49□□□□□ -0.73
RNF40-212ENST00000602784 TRAV25A0A0B4J276 109 aa10.48□□□□□ -0.73
RNF40-212ENST00000602784 FAM24AA6NFZ4 105 aa10.48□□□□□ -0.73
RNF40-212ENST00000602784 H0YIZ8 118 aa10.48□□□□□ -0.73
RNF40-212ENST00000602784 CFDP00746 253 aaPredicted RBP10.48□□□□□ -0.73
RNF40-212ENST00000602784 NPPCP23582 126 aa10.48□□□□□ -0.73
RNF40-212ENST00000602784 CRYBB3P26998 211 aa10.48□□□□□ -0.73
RNF40-212ENST00000602784 S100A11P31949 105 aa10.48□□□□□ -0.73
RNF40-212ENST00000602784 BMI1P35226 326 aa10.48□□□□□ -0.73
RNF40-212ENST00000602784 AKR1C1Q04828 323 aa10.48□□□□□ -0.73
RNF40-212ENST00000602784 LRRC37A5PQ49AS3 106 aa10.48□□□□□ -0.73
RNF40-212ENST00000602784 STX12Q86Y82 276 aa10.48□□□□□ -0.73
RNF40-212ENST00000602784 OR51G1Q8NGK1 321 aa10.48□□□□□ -0.73
RNF40-212ENST00000602784 WDR89Q96FK6 387 aaPredicted RBP10.48□□□□□ -0.73
RNF40-212ENST00000602784 METTL26Q96S19 204 aa10.48□□□□□ -0.73
RNF40-212ENST00000602784 SLC25A31Q9H0C2 315 aa10.48□□□□□ -0.73
RNF40-212ENST00000602784 DNAH3Q8TD57 4116 aa10.48□□□□□ -0.73
RNF40-212ENST00000602784 WI2-2373I1.2A0A1W2PRP0 233 aa10.47□□□□□ -0.73
RNF40-212ENST00000602784 IGSF23A1L1A6 192 aa10.47□□□□□ -0.73
RNF40-212ENST00000602784 CHEK1O14757 476 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms