RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 TMEM231Q9H6L2 316 aa15.58■□□□□ 0.08
PPFIA3-209ENST00000602783 V9GYH0 126 aa15.58■□□□□ 0.08
PPFIA3-209ENST00000602783 DFFBO76075 338 aa15.57■□□□□ 0.08
PPFIA3-209ENST00000602783 IGKV1-17P01599 117 aa15.57■□□□□ 0.08
PPFIA3-209ENST00000602783 KLF9Q13886 244 aaPredicted RBP15.57■□□□□ 0.08
PPFIA3-209ENST00000602783 PYDC2Q56P42 97 aa15.57■□□□□ 0.08
PPFIA3-209ENST00000602783 RNASEH2CQ8TDP1 164 aaKnown RBP15.57■□□□□ 0.08
PPFIA3-209ENST00000602783 GATAD1Q8WUU5 269 aa15.57■□□□□ 0.08
PPFIA3-209ENST00000602783 TMEM170AQ8WVE7 144 aa15.57■□□□□ 0.08
PPFIA3-209ENST00000602783 RARRES2Q99969 163 aa15.57■□□□□ 0.08
PPFIA3-209ENST00000602783 MS4A6AQ9H2W1 248 aa15.57■□□□□ 0.08
PPFIA3-209ENST00000602783 DNASE2O00115 360 aaPredicted RBP15.56■□□□□ 0.08
PPFIA3-209ENST00000602783 NPPCP23582 126 aa15.56■□□□□ 0.08
PPFIA3-209ENST00000602783 NPY1RP25929 384 aa15.56■□□□□ 0.08
PPFIA3-209ENST00000602783 FAUP35544 74 aaKnown RBP15.56■□□□□ 0.08
PPFIA3-209ENST00000602783 RND2P52198 227 aa15.56■□□□□ 0.08
PPFIA3-209ENST00000602783 RPL11P62913 178 aaKnown RBP15.56■□□□□ 0.08
PPFIA3-209ENST00000602783 NMSQ5H8A3 153 aa15.56■□□□□ 0.08
PPFIA3-209ENST00000602783 PRSS54Q6PEW0 395 aa15.56■□□□□ 0.08
PPFIA3-209ENST00000602783 PHLDA1Q8WV24 401 aaPredicted RBP15.56■□□□□ 0.08
PPFIA3-209ENST00000602783 METTL26Q96S19 204 aa15.56■□□□□ 0.08
PPFIA3-209ENST00000602783 TRAV30A0A087WSZ9 112 aa15.55■□□□□ 0.08
PPFIA3-209ENST00000602783 A0A0B4J2A0 478 aa15.55■□□□□ 0.08
PPFIA3-209ENST00000602783 SLC25A4P12235 298 aa15.55■□□□□ 0.08
PPFIA3-209ENST00000602783 LYZL2Q7Z4W2 148 aa15.55■□□□□ 0.08
PPFIA3-209ENST00000602783 OR1S2Q8NGQ3 325 aa15.55■□□□□ 0.08
PPFIA3-209ENST00000602783 CACFD1Q9UGQ2 172 aa15.55■□□□□ 0.08
PPFIA3-209ENST00000602783 SHPKQ9UHJ6 478 aa15.55■□□□□ 0.08
PPFIA3-209ENST00000602783 A0A1W2PS18 150 aa15.54■□□□□ 0.08
PPFIA3-209ENST00000602783 IGLC1P0CG04 106 aa15.54■□□□□ 0.08
PPFIA3-209ENST00000602783 ANXA3P12429 323 aa15.54■□□□□ 0.08
PPFIA3-209ENST00000602783 CRYBB3P26998 211 aa15.54■□□□□ 0.08
PPFIA3-209ENST00000602783 CCR6P51684 374 aa15.54■□□□□ 0.08
PPFIA3-209ENST00000602783 AP3S2P59780 193 aa15.54■□□□□ 0.08
PPFIA3-209ENST00000602783 SRPXP78539 464 aa15.54■□□□□ 0.08
PPFIA3-209ENST00000602783 SMCO1Q147U7 214 aa15.54■□□□□ 0.08
PPFIA3-209ENST00000602783 ZNF79Q15937 498 aa15.54■□□□□ 0.08
PPFIA3-209ENST00000602783 TMED4Q7Z7H5 227 aa15.54■□□□□ 0.08
PPFIA3-209ENST00000602783 LGI3Q8N145 548 aa15.54■□□□□ 0.08
PPFIA3-209ENST00000602783 TOMM5Q8N4H5 51 aa15.54■□□□□ 0.08
PPFIA3-209ENST00000602783 FAM24BQ8N5W8 94 aa15.54■□□□□ 0.08
PPFIA3-209ENST00000602783 OR11H2Q8NH07 326 aa15.54■□□□□ 0.08
PPFIA3-209ENST00000602783 HSPB7Q9UBY9 170 aa15.54■□□□□ 0.08
PPFIA3-209ENST00000602783 RABAC1Q9UI14 185 aa15.54■□□□□ 0.08
PPFIA3-209ENST00000602783 TRAV2A0A0B4J234 112 aa15.53■□□□□ 0.08
PPFIA3-209ENST00000602783 OR10J1P30954 320 aa15.53■□□□□ 0.08
PPFIA3-209ENST00000602783 S100A5P33763 92 aa15.53■□□□□ 0.08
PPFIA3-209ENST00000602783 P2RY1P47900 373 aa15.53■□□□□ 0.08
PPFIA3-209ENST00000602783 DEFB131AP59861 70 aa15.53■□□□□ 0.08
PPFIA3-209ENST00000602783 RBM38Q9H0Z9 239 aaKnown RBP15.53■□□□□ 0.08
PPFIA3-209ENST00000602783 RBKSQ9H477 322 aa15.53■□□□□ 0.08
PPFIA3-209ENST00000602783 CA1P00915 261 aaPredicted RBP15.52■□□□□ 0.08
PPFIA3-209ENST00000602783 LEMD1Q68G75 181 aa15.52■□□□□ 0.08
PPFIA3-209ENST00000602783 ETFRF1Q6IPR1 90 aa15.52■□□□□ 0.08
PPFIA3-209ENST00000602783 NOXA1Q86UR1 476 aa15.52■□□□□ 0.08
PPFIA3-209ENST00000602783 STXBP6Q8NFX7 210 aa15.52■□□□□ 0.08
PPFIA3-209ENST00000602783 DTD1Q8TEA8 209 aa15.52■□□□□ 0.08
PPFIA3-209ENST00000602783 NARS2Q96I59 477 aaKnown RBP15.52■□□□□ 0.08
PPFIA3-209ENST00000602783 KMT2AQ03164 3969 aa15.51■□□□□ 0.07
PPFIA3-209ENST00000602783 IFNA10P01566 189 aa15.51■□□□□ 0.07
PPFIA3-209ENST00000602783 NANOS2P60321 138 aaKnown RBP15.51■□□□□ 0.07
PPFIA3-209ENST00000602783 RBMS2Q15434 407 aaKnown RBP15.51■□□□□ 0.07
PPFIA3-209ENST00000602783 CCDC190Q86UF4 302 aa15.51■□□□□ 0.07
PPFIA3-209ENST00000602783 C11orf45Q8TAV5 145 aa15.51■□□□□ 0.07
PPFIA3-209ENST00000602783 ACY3Q96HD9 319 aa15.51■□□□□ 0.07
PPFIA3-209ENST00000602783 YPEL3P61236 119 aaPredicted RBP15.5■□□□□ 0.07
PPFIA3-209ENST00000602783 RPP25LQ8N5L8 163 aaKnown RBP15.5■□□□□ 0.07
PPFIA3-209ENST00000602783 OR1S1Q8NH92 325 aa15.5■□□□□ 0.07
PPFIA3-209ENST00000602783 Q8WTZ3 238 aa15.5■□□□□ 0.07
PPFIA3-209ENST00000602783 NPIPB3Q92617 1050 aa15.5■□□□□ 0.07
PPFIA3-209ENST00000602783 GRAMD2BQ96HH9 432 aa15.5■□□□□ 0.07
PPFIA3-209ENST00000602783 C11orf68Q9H3H3 251 aaKnown RBP15.5■□□□□ 0.07
PPFIA3-209ENST00000602783 FBXL17Q9UF56 701 aa15.5■□□□□ 0.07
PPFIA3-209ENST00000602783 U3KQ87 197 aa15.5■□□□□ 0.07
PPFIA3-209ENST00000602783 DEFB4AO15263 64 aa15.49■□□□□ 0.07
PPFIA3-209ENST00000602783 HNRNPCP07910 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
PPFIA3-209ENST00000602783 VAMP1P23763 118 aa15.49■□□□□ 0.07
PPFIA3-209ENST00000602783 TMEM128Q5BJH2 165 aa15.49■□□□□ 0.07
PPFIA3-209ENST00000602783 MFFQ9GZY8 342 aa15.49■□□□□ 0.07
PPFIA3-209ENST00000602783 U3KQE9 123 aa15.49■□□□□ 0.07
PPFIA3-209ENST00000602783 PIGBOS1A0A0B4J2F0 54 aa15.48■□□□□ 0.07
PPFIA3-209ENST00000602783 DUXBA0A1W2PPF3 345 aa15.48■□□□□ 0.07
PPFIA3-209ENST00000602783 K7EQG2 157 aa15.48■□□□□ 0.07
PPFIA3-209ENST00000602783 IFNA4P05014 189 aa15.48■□□□□ 0.07
PPFIA3-209ENST00000602783 IL4P05112 153 aa15.48■□□□□ 0.07
PPFIA3-209ENST00000602783 USF2Q15853 346 aaPredicted RBP15.48■□□□□ 0.07
PPFIA3-209ENST00000602783 LGALS9CQ6DKI2 356 aa15.48■□□□□ 0.07
PPFIA3-209ENST00000602783 STHQ8IWL8 128 aa15.48■□□□□ 0.07
PPFIA3-209ENST00000602783 DEDD2Q8WXF8 326 aa15.48■□□□□ 0.07
PPFIA3-209ENST00000602783 DEDDO75618 318 aa15.47■□□□□ 0.07
PPFIA3-209ENST00000602783 TOMM40O96008 361 aa15.47■□□□□ 0.07
PPFIA3-209ENST00000602783 DCANP1Q8TF63 244 aa15.47■□□□□ 0.07
PPFIA3-209ENST00000602783 SLC25A21Q9BQT8 299 aaPredicted RBP15.47■□□□□ 0.07
PPFIA3-209ENST00000602783 FRAS1Q86XX4 4008 aa15.46■□□□□ 0.07
PPFIA3-209ENST00000602783 ZNF701M0R085 212 aaPredicted RBP15.46■□□□□ 0.07
PPFIA3-209ENST00000602783 ZNF688P0C7X2 276 aa15.46■□□□□ 0.07
PPFIA3-209ENST00000602783 EIF2B2P49770 351 aaKnown RBP15.46■□□□□ 0.07
PPFIA3-209ENST00000602783 SPANXN2Q5MJ10 180 aa15.46■□□□□ 0.07
PPFIA3-209ENST00000602783 C16orf54Q6UWD8 224 aa15.46■□□□□ 0.07
PPFIA3-209ENST00000602783 GLMPQ8WWB7 406 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms