RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 ZNF431Q8TF32 576 aaPredicted RBP9.65□□□□□ -0.86
USE1-209ENST00000601592 NEURL2Q9BR09 285 aa9.65□□□□□ -0.86
USE1-209ENST00000601592 TUBA4BQ9H853 241 aa9.65□□□□□ -0.86
USE1-209ENST00000601592 GSKIPQ9P0R6 139 aa9.65□□□□□ -0.86
USE1-209ENST00000601592 TRAV30A0A087WSZ9 112 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 TRAV14DV4A0A0A6YYC5 116 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 IGHV7-4-1A0A0J9YVY3 117 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 ZNF785A8K8V0 405 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 SSSCA1O60232 199 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 CD7P09564 240 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 DEFA1P59665 94 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 DEFA3P59666 94 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 POLR2GP62487 172 aaKnown RBP eCLIP9.64□□□□□ -0.87
USE1-209ENST00000601592 RPP30P78346 268 aaKnown RBP9.64□□□□□ -0.87
USE1-209ENST00000601592 IFITM3Q01628 133 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 LAMTOR1Q6IAA8 161 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 OR1S2Q8NGQ3 325 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 NPIPB3Q92617 1050 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 ZNF414Q96IQ9 312 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 SLC35E1Q96K37 410 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 OR10C1Q96KK4 312 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 RHPN1-AS1Q9BWJ2 59 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 SMPXQ9UHP9 88 aa9.64□□□□□ -0.87
USE1-209ENST00000601592 IGKV3-7A0A075B6H7 116 aa9.63□□□□□ -0.87
USE1-209ENST00000601592 TRAV25A0A0B4J276 109 aa9.63□□□□□ -0.87
USE1-209ENST00000601592 IGHV3-66A0A0C4DH42 116 aa9.63□□□□□ -0.87
USE1-209ENST00000601592 C5orf51A6NDU8 294 aa9.63□□□□□ -0.87
USE1-209ENST00000601592 IGKV1-17P01599 117 aa9.63□□□□□ -0.87
USE1-209ENST00000601592 IGLC1P0CG04 106 aa9.63□□□□□ -0.87
USE1-209ENST00000601592 BMI1P35226 326 aa9.63□□□□□ -0.87
USE1-209ENST00000601592 ATP5IP56385 69 aaPredicted RBP9.63□□□□□ -0.87
USE1-209ENST00000601592 C12orf45Q8N5I9 185 aaPredicted RBP9.63□□□□□ -0.87
USE1-209ENST00000601592 ZBTB8BQ8NAP8 495 aaPredicted RBP9.63□□□□□ -0.87
USE1-209ENST00000601592 OR4D5Q8NGN0 318 aa9.63□□□□□ -0.87
USE1-209ENST00000601592 WFDC10AQ9H1F0 79 aa9.63□□□□□ -0.87
USE1-209ENST00000601592 ZFAND3Q9H8U3 227 aa9.63□□□□□ -0.87
USE1-209ENST00000601592 STRAPQ9Y3F4 350 aaKnown RBP9.63□□□□□ -0.87
USE1-209ENST00000601592 ZFP92A6NM28 416 aa9.62□□□□□ -0.87
USE1-209ENST00000601592 OR11H12B2RN74 326 aa9.62□□□□□ -0.87
USE1-209ENST00000601592 CHEK1O14757 476 aa9.62□□□□□ -0.87
USE1-209ENST00000601592 ID3Q02535 119 aa9.62□□□□□ -0.87
USE1-209ENST00000601592 NRARPQ7Z6K4 114 aa9.62□□□□□ -0.87
USE1-209ENST00000601592 Q8WTZ3 238 aa9.62□□□□□ -0.87
USE1-209ENST00000601592 ST8SIA2Q92186 375 aa9.62□□□□□ -0.87
USE1-209ENST00000601592 METTL26Q96S19 204 aa9.62□□□□□ -0.87
USE1-209ENST00000601592 RNF2Q99496 336 aa9.62□□□□□ -0.87
USE1-209ENST00000601592 GPN1Q9HCN4 374 aaPredicted RBP9.62□□□□□ -0.87
USE1-209ENST00000601592 PSENENQ9NZ42 101 aa9.62□□□□□ -0.87
USE1-209ENST00000601592 NPPCP23582 126 aa9.61□□□□□ -0.87
USE1-209ENST00000601592 GPX4P36969 197 aaPredicted RBP9.61□□□□□ -0.87
USE1-209ENST00000601592 TFPI2P48307 235 aa9.61□□□□□ -0.87
USE1-209ENST00000601592 GAMTQ14353 236 aa9.61□□□□□ -0.87
USE1-209ENST00000601592 SBSPONQ8IVN8 264 aa9.61□□□□□ -0.87
USE1-209ENST00000601592 DEFB125Q8N687 156 aa9.61□□□□□ -0.87
USE1-209ENST00000601592 NARS2Q96I59 477 aaKnown RBP9.61□□□□□ -0.87
USE1-209ENST00000601592 SPAG8Q99932 426 aaPredicted RBP9.61□□□□□ -0.87
USE1-209ENST00000601592 TMEM231Q9H6L2 316 aa9.61□□□□□ -0.87
USE1-209ENST00000601592 COL7A1Q02388 2944 aa9.61□□□□□ -0.87
USE1-209ENST00000601592 INMT-MINDY4F8WBC2 141 aa9.6□□□□□ -0.87
USE1-209ENST00000601592 TSPAN4O14817 238 aa9.6□□□□□ -0.87
USE1-209ENST00000601592 APOHP02749 345 aaPredicted RBP9.6□□□□□ -0.87
USE1-209ENST00000601592 IL4P05112 153 aa9.6□□□□□ -0.87
USE1-209ENST00000601592 IL5P05113 134 aa9.6□□□□□ -0.87
USE1-209ENST00000601592 RD3LP0DJH9 198 aa9.6□□□□□ -0.87
USE1-209ENST00000601592 YPEL3P61236 119 aaPredicted RBP9.6□□□□□ -0.87
USE1-209ENST00000601592 RPL11P62913 178 aaKnown RBP9.6□□□□□ -0.87
USE1-209ENST00000601592 AKR1C1Q04828 323 aa9.6□□□□□ -0.87
USE1-209ENST00000601592 OR8G2PQ6IF36 304 aa9.6□□□□□ -0.87
USE1-209ENST00000601592 TCF24Q7RTU0 167 aa9.6□□□□□ -0.87
USE1-209ENST00000601592 GBGT1Q8N5D6 347 aa9.6□□□□□ -0.87
USE1-209ENST00000601592 SRD5A3Q9H8P0 318 aa9.6□□□□□ -0.87
USE1-209ENST00000601592 UBQLN2Q9UHD9 624 aa9.6□□□□□ -0.87
USE1-209ENST00000601592 RCL1Q9Y2P8 373 aaKnown RBP9.6□□□□□ -0.87
USE1-209ENST00000601592 LSM5Q9Y4Y9 91 aaKnown RBP9.6□□□□□ -0.87
USE1-209ENST00000601592 DNAH9Q9NYC9 4486 aa9.6□□□□□ -0.87
USE1-209ENST00000601592 A0A1W2PS18 150 aa9.59□□□□□ -0.87
USE1-209ENST00000601592 SMCO3A2RU48 225 aa9.59□□□□□ -0.87
USE1-209ENST00000601592 OR4C46A6NHA9 309 aa9.59□□□□□ -0.87
USE1-209ENST00000601592 L7N2F9 121 aa9.59□□□□□ -0.87
USE1-209ENST00000601592 TOMM40O96008 361 aa9.59□□□□□ -0.87
USE1-209ENST00000601592 MBPP02686 304 aaPredicted RBP9.59□□□□□ -0.87
USE1-209ENST00000601592 NHLRC4P0CG21 123 aaPredicted RBP9.59□□□□□ -0.87
USE1-209ENST00000601592 S100A10P60903 97 aa9.59□□□□□ -0.87
USE1-209ENST00000601592 VAMP2P63027 116 aa9.59□□□□□ -0.87
USE1-209ENST00000601592 GSG1LQ6UXU4 331 aa9.59□□□□□ -0.87
USE1-209ENST00000601592 ACOT7LQ6ZUV0 252 aa9.59□□□□□ -0.87
USE1-209ENST00000601592 C2orf50Q96LR7 162 aa9.59□□□□□ -0.87
USE1-209ENST00000601592 RAB40CQ96S21 281 aa9.59□□□□□ -0.87
USE1-209ENST00000601592 PBDC1Q9BVG4 233 aa9.59□□□□□ -0.87
USE1-209ENST00000601592 C19orf73Q9NVV2 129 aa9.59□□□□□ -0.87
USE1-209ENST00000601592 A8MZ25 164 aa9.58□□□□□ -0.88
USE1-209ENST00000601592 DFFBO76075 338 aa9.58□□□□□ -0.88
USE1-209ENST00000601592 FABP1P07148 127 aa9.58□□□□□ -0.88
USE1-209ENST00000601592 HNRNPCP07910 306 aaKnown RBP eCLIP9.58□□□□□ -0.88
USE1-209ENST00000601592 METTL15P1P0C7V9 234 aa9.58□□□□□ -0.88
USE1-209ENST00000601592 PSG1P11464 419 aa9.58□□□□□ -0.88
USE1-209ENST00000601592 P2RY1P47900 373 aa9.58□□□□□ -0.88
USE1-209ENST00000601592 LYZP61626 148 aa9.58□□□□□ -0.88
USE1-209ENST00000601592 RRAS2P62070 204 aaPredicted RBP9.58□□□□□ -0.88
USE1-209ENST00000601592 PAFAH1B2P68402 229 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms