RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 SLC16A13Q7RTY0 426 aa11.77□□□□□ -0.53
RPS28-203ENST00000600659 LILRB2Q8N423 598 aa11.77□□□□□ -0.53
RPS28-203ENST00000600659 DEFB125Q8N687 156 aa11.77□□□□□ -0.53
RPS28-203ENST00000600659 RHPN1-AS1Q9BWJ2 59 aa11.77□□□□□ -0.53
RPS28-203ENST00000600659 WDR12Q9GZL7 423 aaKnown RBP11.77□□□□□ -0.53
RPS28-203ENST00000600659 IGKV1D-37A0A075B6S9 117 aa11.76□□□□□ -0.53
RPS28-203ENST00000600659 SYNGR2O43760 224 aa11.76□□□□□ -0.53
RPS28-203ENST00000600659 NOXA1Q86UR1 476 aa11.76□□□□□ -0.53
RPS28-203ENST00000600659 ST8SIA2Q92186 375 aa11.76□□□□□ -0.53
RPS28-203ENST00000600659 NPIPB3Q92617 1050 aa11.76□□□□□ -0.53
RPS28-203ENST00000600659 SPAG8Q99932 426 aaPredicted RBP11.76□□□□□ -0.53
RPS28-203ENST00000600659 SEC22CQ9BRL7 303 aa11.76□□□□□ -0.53
RPS28-203ENST00000600659 TM2D3Q9BRN9 247 aa11.76□□□□□ -0.53
RPS28-203ENST00000600659 VSIRQ9H7M9 311 aa11.76□□□□□ -0.53
RPS28-203ENST00000600659 IGHV3OR16-13A0A075B7E8 117 aa11.75□□□□□ -0.53
RPS28-203ENST00000600659 TRAV14DV4A0A0A6YYC5 116 aa11.75□□□□□ -0.53
RPS28-203ENST00000600659 IGHV3-74A0A0B4J1X5 117 aa11.75□□□□□ -0.53
RPS28-203ENST00000600659 OR10J1P30954 320 aa11.75□□□□□ -0.53
RPS28-203ENST00000600659 ATP5IP56385 69 aaPredicted RBP11.75□□□□□ -0.53
RPS28-203ENST00000600659 POLR2GP62487 172 aaKnown RBP eCLIP11.75□□□□□ -0.53
RPS28-203ENST00000600659 OR1S2Q8NGQ3 325 aa11.75□□□□□ -0.53
RPS28-203ENST00000600659 CITED4Q96RK1 184 aa11.75□□□□□ -0.53
RPS28-203ENST00000600659 TRAV30A0A087WSZ9 112 aa11.74□□□□□ -0.53
RPS28-203ENST00000600659 RBMY1BA6NDE4 496 aaKnown RBP11.74□□□□□ -0.53
RPS28-203ENST00000600659 RBMY1EA6NEQ0 496 aaKnown RBP11.74□□□□□ -0.53
RPS28-203ENST00000600659 OR11H12B2RN74 326 aa11.74□□□□□ -0.53
RPS28-203ENST00000600659 MED6O75586 246 aa11.74□□□□□ -0.53
RPS28-203ENST00000600659 RBMY1DP0C7P1 496 aaKnown RBP11.74□□□□□ -0.53
RPS28-203ENST00000600659 YPEL3P61236 119 aaPredicted RBP11.74□□□□□ -0.53
RPS28-203ENST00000600659 GAMTQ14353 236 aa11.74□□□□□ -0.53
RPS28-203ENST00000600659 ODF3L2Q3SX64 289 aa11.74□□□□□ -0.53
RPS28-203ENST00000600659 RBPMS2Q6ZRY4 209 aaKnown RBP11.74□□□□□ -0.53
RPS28-203ENST00000600659 ACY3Q96HD9 319 aa11.74□□□□□ -0.53
RPS28-203ENST00000600659 GINS3Q9BRX5 216 aa11.74□□□□□ -0.53
RPS28-203ENST00000600659 U3KQE9 123 aa11.74□□□□□ -0.53
RPS28-203ENST00000600659 U3KQK5 164 aa11.74□□□□□ -0.53
RPS28-203ENST00000600659 IGKV1OR2-108A0A075B7D4 117 aa11.73□□□□□ -0.53
RPS28-203ENST00000600659 FAM240BA0A1B0GVZ2 78 aa11.73□□□□□ -0.53
RPS28-203ENST00000600659 PMS2P5A8MQ11 134 aa11.73□□□□□ -0.53
RPS28-203ENST00000600659 WRBO00258 174 aa11.73□□□□□ -0.53
RPS28-203ENST00000600659 CCSO14618 274 aa11.73□□□□□ -0.53
RPS28-203ENST00000600659 IFNA4P05014 189 aa11.73□□□□□ -0.53
RPS28-203ENST00000600659 H2AFB2P0C5Z0 115 aa11.73□□□□□ -0.53
RPS28-203ENST00000600659 CRYBB3P26998 211 aa11.73□□□□□ -0.53
RPS28-203ENST00000600659 GPX4P36969 197 aaPredicted RBP11.73□□□□□ -0.53
RPS28-203ENST00000600659 PAX9P55771 341 aa11.73□□□□□ -0.53
RPS28-203ENST00000600659 USF2Q15853 346 aaPredicted RBP11.73□□□□□ -0.53
RPS28-203ENST00000600659 HAGHQ16775 308 aa11.73□□□□□ -0.53
RPS28-203ENST00000600659 ETFRF1Q6IPR1 90 aa11.73□□□□□ -0.53
RPS28-203ENST00000600659 ZBTB8BQ8NAP8 495 aaPredicted RBP11.73□□□□□ -0.53
RPS28-203ENST00000600659 ZNF431Q8TF32 576 aaPredicted RBP11.73□□□□□ -0.53
RPS28-203ENST00000600659 CIB3Q96Q77 187 aaPredicted RBP11.73□□□□□ -0.53
RPS28-203ENST00000600659 RCL1Q9Y2P8 373 aaKnown RBP11.73□□□□□ -0.53
RPS28-203ENST00000600659 IGHV3-66A0A0C4DH42 116 aa11.72□□□□□ -0.53
RPS28-203ENST00000600659 H3BP45 60 aa11.72□□□□□ -0.53
RPS28-203ENST00000600659 IFNA21P01568 189 aa11.72□□□□□ -0.53
RPS28-203ENST00000600659 NKX2-1P43699 371 aaPredicted RBP11.72□□□□□ -0.53
RPS28-203ENST00000600659 IAH1Q2TAA2 248 aaPredicted RBP11.72□□□□□ -0.53
RPS28-203ENST00000600659 SRD5A3Q9H8P0 318 aa11.72□□□□□ -0.53
RPS28-203ENST00000600659 CCNKO75909 580 aa11.71□□□□□ -0.53
RPS28-203ENST00000600659 TOMM40O96008 361 aa11.71□□□□□ -0.53
RPS28-203ENST00000600659 LAMTOR1Q6IAA8 161 aa11.71□□□□□ -0.53
RPS28-203ENST00000600659 MZT2BQ6NZ67 158 aa11.71□□□□□ -0.53
RPS28-203ENST00000600659 KMT2CQ8NEZ4 4911 aaKnown RBP11.7□□□□□ -0.54
RPS28-203ENST00000600659 DFFBO76075 338 aa11.7□□□□□ -0.54
RPS28-203ENST00000600659 PSG1P11464 419 aa11.7□□□□□ -0.54
RPS28-203ENST00000600659 RAB11AP62491 216 aa11.7□□□□□ -0.54
RPS28-203ENST00000600659 SPANXN5Q5MJ07 72 aa11.7□□□□□ -0.54
RPS28-203ENST00000600659 TCF24Q7RTU0 167 aa11.7□□□□□ -0.54
RPS28-203ENST00000600659 NRARPQ7Z6K4 114 aa11.7□□□□□ -0.54
RPS28-203ENST00000600659 THAP8Q8NA92 274 aa11.7□□□□□ -0.54
RPS28-203ENST00000600659 RCHY1Q96PM5 261 aa11.7□□□□□ -0.54
RPS28-203ENST00000600659 FAM110AQ9BQ89 295 aa11.7□□□□□ -0.54
RPS28-203ENST00000600659 C11orf1Q9H5F2 150 aa11.7□□□□□ -0.54
RPS28-203ENST00000600659 TUBA4BQ9H853 241 aa11.7□□□□□ -0.54
RPS28-203ENST00000600659 UBQLN2Q9UHD9 624 aa11.7□□□□□ -0.54
RPS28-203ENST00000600659 NBEAL2Q6ZNJ1 2754 aa11.7□□□□□ -0.54
RPS28-203ENST00000600659 SSSCA1O60232 199 aa11.69□□□□□ -0.54
RPS28-203ENST00000600659 SCGB2A1O75556 95 aa11.69□□□□□ -0.54
RPS28-203ENST00000600659 MBPP02686 304 aaPredicted RBP11.69□□□□□ -0.54
RPS28-203ENST00000600659 IL4P05112 153 aa11.69□□□□□ -0.54
RPS28-203ENST00000600659 IL5P05113 134 aa11.69□□□□□ -0.54
RPS28-203ENST00000600659 ZNF90Q03938 601 aa11.69□□□□□ -0.54
RPS28-203ENST00000600659 IL15RAQ13261 267 aa11.69□□□□□ -0.54
RPS28-203ENST00000600659 TMEM14EPQ6UXP3 125 aa11.69□□□□□ -0.54
RPS28-203ENST00000600659 C12orf45Q8N5I9 185 aaPredicted RBP11.69□□□□□ -0.54
RPS28-203ENST00000600659 GLMPQ8WWB7 406 aa11.69□□□□□ -0.54
RPS28-203ENST00000600659 SLC35E1Q96K37 410 aa11.69□□□□□ -0.54
RPS28-203ENST00000600659 SMIM8Q96KF7 97 aa11.69□□□□□ -0.54
RPS28-203ENST00000600659 METTL26Q96S19 204 aa11.69□□□□□ -0.54
RPS28-203ENST00000600659 STARD9Q9P2P6 4700 aa11.69□□□□□ -0.54
RPS28-203ENST00000600659 AGRNO00468 2067 aa11.68□□□□□ -0.54
RPS28-203ENST00000600659 IGKV3-7A0A075B6H7 116 aa11.68□□□□□ -0.54
RPS28-203ENST00000600659 OR4C46A6NHA9 309 aa11.68□□□□□ -0.54
RPS28-203ENST00000600659 NPPCP23582 126 aa11.68□□□□□ -0.54
RPS28-203ENST00000600659 ACOT7LQ6ZUV0 252 aa11.68□□□□□ -0.54
RPS28-203ENST00000600659 FAM24BQ8N5W8 94 aa11.68□□□□□ -0.54
RPS28-203ENST00000600659 STPG3Q8N7X2 389 aa11.68□□□□□ -0.54
RPS28-203ENST00000600659 Q8WTZ3 238 aa11.68□□□□□ -0.54
RPS28-203ENST00000600659 WWC2-AS2Q96NR7 200 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms