RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 IGHV3OR16-8A0A075B7F1 116 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 TRAV30A0A087WSZ9 112 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 TRAV14DV4A0A0A6YYC5 116 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 PMS2P5A8MQ11 134 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 CENPXA8MT69 81 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 SYNGR2O43760 224 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 ADAP1O75689 374 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 APOHP02749 345 aaPredicted RBP6.54□□□□□ -1.36
SSBP4-208ENST00000600628 CD5P06127 495 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 OPRK1P41145 380 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 PAX9P55771 341 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 CD81P60033 236 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 GUCA2BQ16661 112 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 ODF3L2Q3SX64 289 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 RHPN1-AS1Q9BWJ2 59 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 WFDC10AQ9H1F0 79 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 C20orf85Q9H1P6 137 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 HIPK2Q9H2X6 1198 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 TUBA4BQ9H853 241 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 PUS1Q9Y606 427 aaKnown RBP eCLIP6.54□□□□□ -1.36
SSBP4-208ENST00000600628 SELENOKQ9Y6D0 94 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 RYR3Q15413 4870 aa6.54□□□□□ -1.36
SSBP4-208ENST00000600628 TRAV2A0A0B4J234 112 aa6.53□□□□□ -1.36
SSBP4-208ENST00000600628 RPS10-NUDT3A0A1W2PQS6 291 aa6.53□□□□□ -1.36
SSBP4-208ENST00000600628 OR11H12B2RN74 326 aa6.53□□□□□ -1.36
SSBP4-208ENST00000600628 ZNF207O43670 478 aaKnown RBP6.53□□□□□ -1.36
SSBP4-208ENST00000600628 HOXB5P09067 269 aa6.53□□□□□ -1.36
SSBP4-208ENST00000600628 RND2P52198 227 aa6.53□□□□□ -1.36
SSBP4-208ENST00000600628 IL15RAQ13261 267 aa6.53□□□□□ -1.36
SSBP4-208ENST00000600628 GAMTQ14353 236 aa6.53□□□□□ -1.36
SSBP4-208ENST00000600628 ETFRF1Q6IPR1 90 aa6.53□□□□□ -1.36
SSBP4-208ENST00000600628 DEFB125Q8N687 156 aa6.53□□□□□ -1.36
SSBP4-208ENST00000600628 THAP8Q8NA92 274 aa6.53□□□□□ -1.36
SSBP4-208ENST00000600628 OR1S2Q8NGQ3 325 aa6.53□□□□□ -1.36
SSBP4-208ENST00000600628 OR1S1Q8NH92 325 aa6.53□□□□□ -1.36
SSBP4-208ENST00000600628 ST8SIA2Q92186 375 aa6.53□□□□□ -1.36
SSBP4-208ENST00000600628 NPIPB3Q92617 1050 aa6.53□□□□□ -1.36
SSBP4-208ENST00000600628 PPP1R14BQ96C90 147 aa6.53□□□□□ -1.36
SSBP4-208ENST00000600628 C11orf1Q9H5F2 150 aa6.53□□□□□ -1.36
SSBP4-208ENST00000600628 LINC00854A0A1B0GVQ3 168 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 MED6O75586 246 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 UPK1BO75841 260 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 TOMM40O96008 361 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 IFNA10P01566 189 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 OR10J1P30954 320 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 INPP1P49441 399 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 TIGITQ495A1 244 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 LAMTOR1Q6IAA8 161 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 RBPMS2Q6ZRY4 209 aaKnown RBP6.52□□□□□ -1.37
SSBP4-208ENST00000600628 SLC16A13Q7RTY0 426 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 OR52B4Q8NGK2 314 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 COQ8AQ8NI60 647 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 SMIM8Q96KF7 97 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 CIB3Q96Q77 187 aaPredicted RBP6.52□□□□□ -1.37
SSBP4-208ENST00000600628 SPATA25Q9BR10 227 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 GINS3Q9BRX5 216 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 C20orf24Q9BUV8 137 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 EDA2RQ9HAV5 297 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 NUDT15Q9NV35 164 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 AGRNO00468 2067 aa6.52□□□□□ -1.37
SSBP4-208ENST00000600628 C3orf84H3BNL1 204 aa6.51□□□□□ -1.37
SSBP4-208ENST00000600628 IL5P05113 134 aa6.51□□□□□ -1.37
SSBP4-208ENST00000600628 TAS2R30P59541 319 aa6.51□□□□□ -1.37
SSBP4-208ENST00000600628 USF2Q15853 346 aaPredicted RBP6.51□□□□□ -1.37
SSBP4-208ENST00000600628 TMEM14EPQ6UXP3 125 aa6.51□□□□□ -1.37
SSBP4-208ENST00000600628 STPG3Q8N7X2 389 aa6.51□□□□□ -1.37
SSBP4-208ENST00000600628 ZNF431Q8TF32 576 aaPredicted RBP6.51□□□□□ -1.37
SSBP4-208ENST00000600628 DCANP1Q8TF63 244 aa6.51□□□□□ -1.37
SSBP4-208ENST00000600628 GLMPQ8WWB7 406 aa6.51□□□□□ -1.37
SSBP4-208ENST00000600628 WDR12Q9GZL7 423 aaKnown RBP6.51□□□□□ -1.37
SSBP4-208ENST00000600628 RCL1Q9Y2P8 373 aaKnown RBP6.51□□□□□ -1.37
SSBP4-208ENST00000600628 IGHV3-49A0A0A0MS15 119 aa6.5□□□□□ -1.37
SSBP4-208ENST00000600628 OR4C46A6NHA9 309 aa6.5□□□□□ -1.37
SSBP4-208ENST00000600628 FNDC10F2Z333 226 aa6.5□□□□□ -1.37
SSBP4-208ENST00000600628 BUB3O43684 328 aa6.5□□□□□ -1.37
SSBP4-208ENST00000600628 DFFBO76075 338 aa6.5□□□□□ -1.37
SSBP4-208ENST00000600628 YIF1AO95070 293 aa6.5□□□□□ -1.37
SSBP4-208ENST00000600628 IAPPP10997 89 aa6.5□□□□□ -1.37
SSBP4-208ENST00000600628 PSG1P11464 419 aa6.5□□□□□ -1.37
SSBP4-208ENST00000600628 NPPCP23582 126 aa6.5□□□□□ -1.37
SSBP4-208ENST00000600628 NKX2-1P43699 371 aaPredicted RBP6.5□□□□□ -1.37
SSBP4-208ENST00000600628 POLR2GP62487 172 aaKnown RBP eCLIP6.5□□□□□ -1.37
SSBP4-208ENST00000600628 ZNF846Q147U1 533 aa6.5□□□□□ -1.37
SSBP4-208ENST00000600628 C4orf46Q504U0 113 aa6.5□□□□□ -1.37
SSBP4-208ENST00000600628 C16orf54Q6UWD8 224 aa6.5□□□□□ -1.37
SSBP4-208ENST00000600628 ZBTB8BQ8NAP8 495 aaPredicted RBP6.5□□□□□ -1.37
SSBP4-208ENST00000600628 MUC7Q8TAX7 377 aa6.5□□□□□ -1.37
SSBP4-208ENST00000600628 TRGV9Q99603 122 aa6.5□□□□□ -1.37
SSBP4-208ENST00000600628 MAGT1Q9H0U3 335 aa6.5□□□□□ -1.37
SSBP4-208ENST00000600628 SRD5A3Q9H8P0 318 aa6.5□□□□□ -1.37
SSBP4-208ENST00000600628 TRAV6A0A075B6T7 132 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 IGHV3OR16-13A0A075B7E8 117 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 IGHV3-74A0A0B4J1X5 117 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 KIR2DL5BA0A0G2JN68 375 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 KIR2DL5BA0A0G2JPC4 375 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 FAM240BA0A1B0GVZ2 78 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 C7orf66A4D0T2 115 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 K7EPK0 472 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 K7EQG2 157 aa6.49□□□□□ -1.37
SSBP4-208ENST00000600628 WRBO00258 174 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms