RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 H3BMQ9 156 aa11.62□□□□□ -0.55
VRK3-221ENST00000600284 SULT1A3P0DMM9 295 aa11.62□□□□□ -0.55
VRK3-221ENST00000600284 SULT1A4P0DMN0 295 aa11.62□□□□□ -0.55
VRK3-221ENST00000600284 YPEL3P61236 119 aaPredicted RBP11.62□□□□□ -0.55
VRK3-221ENST00000600284 NMSQ5H8A3 153 aa11.62□□□□□ -0.55
VRK3-221ENST00000600284 PRSS54Q6PEW0 395 aa11.62□□□□□ -0.55
VRK3-221ENST00000600284 Q8WTZ3 238 aa11.62□□□□□ -0.55
VRK3-221ENST00000600284 SHPKQ9UHJ6 478 aa11.62□□□□□ -0.55
VRK3-221ENST00000600284 IGHV3-66A0A0C4DH42 116 aa11.61□□□□□ -0.55
VRK3-221ENST00000600284 IGLC1P0CG04 106 aa11.61□□□□□ -0.55
VRK3-221ENST00000600284 CCR6P51684 374 aa11.61□□□□□ -0.55
VRK3-221ENST00000600284 SRPXP78539 464 aa11.61□□□□□ -0.55
VRK3-221ENST00000600284 EWSR1Q01844 656 aaKnown RBP eCLIP11.61□□□□□ -0.55
VRK3-221ENST00000600284 TIGITQ495A1 244 aa11.61□□□□□ -0.55
VRK3-221ENST00000600284 CEMP1Q6PRD7 247 aaPredicted RBP11.61□□□□□ -0.55
VRK3-221ENST00000600284 MCFD2Q8NI22 146 aa11.61□□□□□ -0.55
VRK3-221ENST00000600284 GRAMD2BQ96HH9 432 aa11.61□□□□□ -0.55
VRK3-221ENST00000600284 RARRES2Q99969 163 aa11.61□□□□□ -0.55
VRK3-221ENST00000600284 MCUBQ9NWR8 336 aa11.61□□□□□ -0.55
VRK3-221ENST00000600284 U3KQ87 197 aa11.61□□□□□ -0.55
VRK3-221ENST00000600284 ANXA3P12429 323 aa11.6□□□□□ -0.55
VRK3-221ENST00000600284 NPY1RP25929 384 aa11.6□□□□□ -0.55
VRK3-221ENST00000600284 OR10J1P30954 320 aa11.6□□□□□ -0.55
VRK3-221ENST00000600284 FAUP35544 74 aaKnown RBP11.6□□□□□ -0.55
VRK3-221ENST00000600284 P2RY1P47900 373 aa11.6□□□□□ -0.55
VRK3-221ENST00000600284 EIF2B2P49770 351 aaKnown RBP11.6□□□□□ -0.55
VRK3-221ENST00000600284 RND2P52198 227 aa11.6□□□□□ -0.55
VRK3-221ENST00000600284 ATP5IP56385 69 aaPredicted RBP11.6□□□□□ -0.55
VRK3-221ENST00000600284 DEFB131AP59861 70 aa11.6□□□□□ -0.55
VRK3-221ENST00000600284 PMS2P11Q13670 270 aa11.6□□□□□ -0.55
VRK3-221ENST00000600284 TMEM170AQ8WVE7 144 aa11.6□□□□□ -0.55
VRK3-221ENST00000600284 HSPB7Q9UBY9 170 aa11.6□□□□□ -0.55
VRK3-221ENST00000600284 RABAC1Q9UI14 185 aa11.6□□□□□ -0.55
VRK3-221ENST00000600284 U3KQE9 123 aa11.6□□□□□ -0.55
VRK3-221ENST00000600284 HELTA6NFD8 242 aa11.59□□□□□ -0.55
VRK3-221ENST00000600284 K7EQG2 157 aa11.59□□□□□ -0.55
VRK3-221ENST00000600284 AKR1C4P17516 323 aa11.59□□□□□ -0.55
VRK3-221ENST00000600284 AP2S1P53680 142 aaPredicted RBP11.59□□□□□ -0.55
VRK3-221ENST00000600284 AP3S2P59780 193 aa11.59□□□□□ -0.55
VRK3-221ENST00000600284 SUPT4H1P63272 117 aaKnown RBP11.59□□□□□ -0.55
VRK3-221ENST00000600284 SMCO1Q147U7 214 aa11.59□□□□□ -0.55
VRK3-221ENST00000600284 LGI3Q8N145 548 aa11.59□□□□□ -0.55
VRK3-221ENST00000600284 DEDD2Q8WXF8 326 aa11.59□□□□□ -0.55
VRK3-221ENST00000600284 KLK5Q9Y337 293 aaPredicted RBP11.59□□□□□ -0.55
VRK3-221ENST00000600284 EPPK1P58107 5090 aaKnown RBP11.59□□□□□ -0.55
VRK3-221ENST00000600284 ALMS1Q8TCU4 4167 aa11.58□□□□□ -0.56
VRK3-221ENST00000600284 CA1P00915 261 aaPredicted RBP11.58□□□□□ -0.56
VRK3-221ENST00000600284 IFNA10P01566 189 aa11.58□□□□□ -0.56
VRK3-221ENST00000600284 HNRNPCP07910 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
VRK3-221ENST00000600284 TMEM41BQ5BJD5 291 aa11.58□□□□□ -0.56
VRK3-221ENST00000600284 LEMD1Q68G75 181 aa11.58□□□□□ -0.56
VRK3-221ENST00000600284 LYZL2Q7Z4W2 148 aa11.58□□□□□ -0.56
VRK3-221ENST00000600284 STHQ8IWL8 128 aa11.58□□□□□ -0.56
VRK3-221ENST00000600284 FAM24BQ8N5W8 94 aa11.58□□□□□ -0.56
VRK3-221ENST00000600284 STXBP6Q8NFX7 210 aa11.58□□□□□ -0.56
VRK3-221ENST00000600284 DTD1Q8TEA8 209 aa11.58□□□□□ -0.56
VRK3-221ENST00000600284 DCANP1Q8TF63 244 aa11.58□□□□□ -0.56
VRK3-221ENST00000600284 LINC00476Q8WZB0 136 aa11.58□□□□□ -0.56
VRK3-221ENST00000600284 NPIPB3Q92617 1050 aa11.58□□□□□ -0.56
VRK3-221ENST00000600284 C11orf68Q9H3H3 251 aaKnown RBP11.58□□□□□ -0.56
VRK3-221ENST00000600284 DUXBA0A1W2PPF3 345 aa11.57□□□□□ -0.56
VRK3-221ENST00000600284 KLF9Q13886 244 aaPredicted RBP11.57□□□□□ -0.56
VRK3-221ENST00000600284 RBMS2Q15434 407 aaKnown RBP11.57□□□□□ -0.56
VRK3-221ENST00000600284 C16orf54Q6UWD8 224 aa11.57□□□□□ -0.56
VRK3-221ENST00000600284 TOMM5Q8N4H5 51 aa11.57□□□□□ -0.56
VRK3-221ENST00000600284 OR11H2Q8NH07 326 aa11.57□□□□□ -0.56
VRK3-221ENST00000600284 PRR13Q9NZ81 148 aa11.57□□□□□ -0.56
VRK3-221ENST00000600284 NXPH3O95157 252 aa11.56□□□□□ -0.56
VRK3-221ENST00000600284 TOMM40O96008 361 aa11.56□□□□□ -0.56
VRK3-221ENST00000600284 IL4P05112 153 aa11.56□□□□□ -0.56
VRK3-221ENST00000600284 RD3LP0DJH9 198 aa11.56□□□□□ -0.56
VRK3-221ENST00000600284 PYDC2Q56P42 97 aa11.56□□□□□ -0.56
VRK3-221ENST00000600284 TMEM128Q5BJH2 165 aa11.56□□□□□ -0.56
VRK3-221ENST00000600284 MORN3Q6PF18 240 aaPredicted RBP11.56□□□□□ -0.56
VRK3-221ENST00000600284 TRPT1Q86TN4 253 aaKnown RBP11.56□□□□□ -0.56
VRK3-221ENST00000600284 GLMPQ8WWB7 406 aa11.56□□□□□ -0.56
VRK3-221ENST00000600284 TRIM63Q969Q1 353 aa11.56□□□□□ -0.56
VRK3-221ENST00000600284 SLC25A21Q9BQT8 299 aaPredicted RBP11.56□□□□□ -0.56
VRK3-221ENST00000600284 MFFQ9GZY8 342 aa11.56□□□□□ -0.56
VRK3-221ENST00000600284 RBKSQ9H477 322 aa11.56□□□□□ -0.56
VRK3-221ENST00000600284 SEPSECSQ9HD40 501 aaKnown RBP11.56□□□□□ -0.56
VRK3-221ENST00000600284 BIRC6Q9NR09 4857 aa11.56□□□□□ -0.56
VRK3-221ENST00000600284 SPP1P10451 314 aa11.55□□□□□ -0.56
VRK3-221ENST00000600284 S100A5P33763 92 aa11.55□□□□□ -0.56
VRK3-221ENST00000600284 GPX4P36969 197 aaPredicted RBP11.55□□□□□ -0.56
VRK3-221ENST00000600284 DHRS2Q13268 280 aa11.55□□□□□ -0.56
VRK3-221ENST00000600284 LRTM2Q8N967 370 aa11.55□□□□□ -0.56
VRK3-221ENST00000600284 OR1S1Q8NH92 325 aa11.55□□□□□ -0.56
VRK3-221ENST00000600284 PHLDA1Q8WV24 401 aaPredicted RBP11.55□□□□□ -0.56
VRK3-221ENST00000600284 ACY3Q96HD9 319 aa11.55□□□□□ -0.56
VRK3-221ENST00000600284 V9GYH0 126 aa11.55□□□□□ -0.56
VRK3-221ENST00000600284 BUB3O43684 328 aa11.54□□□□□ -0.56
VRK3-221ENST00000600284 PITX3O75364 302 aa11.54□□□□□ -0.56
VRK3-221ENST00000600284 IFNA4P05014 189 aa11.54□□□□□ -0.56
VRK3-221ENST00000600284 ZNF688P0C7X2 276 aa11.54□□□□□ -0.56
VRK3-221ENST00000600284 SLC25A6P12236 298 aa11.54□□□□□ -0.56
VRK3-221ENST00000600284 NUP62P37198 522 aaPredicted RBP11.54□□□□□ -0.56
VRK3-221ENST00000600284 USF2Q15853 346 aaPredicted RBP11.54□□□□□ -0.56
VRK3-221ENST00000600284 C11orf45Q8TAV5 145 aa11.54□□□□□ -0.56
VRK3-221ENST00000600284 PFDN2Q9UHV9 154 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms