RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 LSM5Q9Y4Y9 91 aaKnown RBP10.41□□□□□ -0.74
VRK3-219ENST00000600137 PRKDCP78527 4128 aaKnown RBP10.4□□□□□ -0.74
VRK3-219ENST00000600137 IGKV1OR2-108A0A075B7D4 117 aa10.4□□□□□ -0.74
VRK3-219ENST00000600137 IGHV3OR16-8A0A075B7F1 116 aa10.4□□□□□ -0.74
VRK3-219ENST00000600137 ZNF320A2RRD8 509 aa10.4□□□□□ -0.74
VRK3-219ENST00000600137 K7EMT4 169 aa10.4□□□□□ -0.74
VRK3-219ENST00000600137 SSNA1O43805 119 aa10.4□□□□□ -0.74
VRK3-219ENST00000600137 PRB2P02812 416 aaPredicted RBP10.4□□□□□ -0.74
VRK3-219ENST00000600137 CBLN1P23435 193 aa10.4□□□□□ -0.74
VRK3-219ENST00000600137 RPP30P78346 268 aaKnown RBP10.4□□□□□ -0.74
VRK3-219ENST00000600137 TIGITQ495A1 244 aa10.4□□□□□ -0.74
VRK3-219ENST00000600137 ZNF600Q6ZNG1 722 aa10.4□□□□□ -0.74
VRK3-219ENST00000600137 RNF126Q9BV68 326 aa10.4□□□□□ -0.74
VRK3-219ENST00000600137 PEMTQ9UBM1 199 aa10.4□□□□□ -0.74
VRK3-219ENST00000600137 MGAT4CQ9UBM8 478 aa10.4□□□□□ -0.74
VRK3-219ENST00000600137 TRAV30A0A087WSZ9 112 aa10.39□□□□□ -0.75
VRK3-219ENST00000600137 IZUMO1RA6ND01 250 aa10.39□□□□□ -0.75
VRK3-219ENST00000600137 FAM24AA6NFZ4 105 aa10.39□□□□□ -0.75
VRK3-219ENST00000600137 METTL15P1P0C7V9 234 aa10.39□□□□□ -0.75
VRK3-219ENST00000600137 YPEL3P61236 119 aaPredicted RBP10.39□□□□□ -0.75
VRK3-219ENST00000600137 DEFA6Q01524 100 aa10.39□□□□□ -0.75
VRK3-219ENST00000600137 FCN2Q15485 313 aa10.39□□□□□ -0.75
VRK3-219ENST00000600137 DEFB114Q30KQ6 69 aa10.39□□□□□ -0.75
VRK3-219ENST00000600137 OR11H7Q8NGC8 314 aa10.39□□□□□ -0.75
VRK3-219ENST00000600137 ACY3Q96HD9 319 aa10.39□□□□□ -0.75
VRK3-219ENST00000600137 MLXQ9UH92 298 aa10.39□□□□□ -0.75
VRK3-219ENST00000600137 WI2-2373I1.2A0A1W2PRP0 233 aa10.38□□□□□ -0.75
VRK3-219ENST00000600137 DEDDO75618 318 aa10.38□□□□□ -0.75
VRK3-219ENST00000600137 OR10J1P30954 320 aa10.38□□□□□ -0.75
VRK3-219ENST00000600137 CYCSP99999 105 aaKnown RBP10.38□□□□□ -0.75
VRK3-219ENST00000600137 RELQ04864 619 aaPredicted RBP10.38□□□□□ -0.75
VRK3-219ENST00000600137 THAP8Q8NA92 274 aa10.38□□□□□ -0.75
VRK3-219ENST00000600137 OR1S2Q8NGQ3 325 aa10.38□□□□□ -0.75
VRK3-219ENST00000600137 AURKAIP1Q9NWT8 199 aaPredicted RBP10.38□□□□□ -0.75
VRK3-219ENST00000600137 OR5AC2Q9NZP5 309 aa10.38□□□□□ -0.75
VRK3-219ENST00000600137 MRPL27Q9P0M9 148 aaKnown RBP10.38□□□□□ -0.75
VRK3-219ENST00000600137 PAIP2BQ9ULR5 123 aaKnown RBP10.38□□□□□ -0.75
VRK3-219ENST00000600137 UFC1Q9Y3C8 167 aa10.38□□□□□ -0.75
VRK3-219ENST00000600137 PUS1Q9Y606 427 aaKnown RBP eCLIP10.38□□□□□ -0.75
VRK3-219ENST00000600137 IGSF23A1L1A6 192 aa10.37□□□□□ -0.75
VRK3-219ENST00000600137 ZNF785A8K8V0 405 aa10.37□□□□□ -0.75
VRK3-219ENST00000600137 ZNF207O43670 478 aaKnown RBP10.37□□□□□ -0.75
VRK3-219ENST00000600137 SCAF4O95104 1147 aaKnown RBP10.37□□□□□ -0.75
VRK3-219ENST00000600137 ZNF90Q03938 601 aa10.37□□□□□ -0.75
VRK3-219ENST00000600137 OR8G2PQ6IF36 304 aa10.37□□□□□ -0.75
VRK3-219ENST00000600137 ACOT7LQ6ZUV0 252 aa10.37□□□□□ -0.75
VRK3-219ENST00000600137 TMEM252Q8N6L7 170 aa10.37□□□□□ -0.75
VRK3-219ENST00000600137 PPP1R1CQ8WVI7 109 aa10.37□□□□□ -0.75
VRK3-219ENST00000600137 DAZ1Q9NQZ3 744 aaKnown RBP10.37□□□□□ -0.75
VRK3-219ENST00000600137 LYRM2Q9NU23 88 aaPredicted RBP10.37□□□□□ -0.75
VRK3-219ENST00000600137 SMPXQ9UHP9 88 aa10.37□□□□□ -0.75
VRK3-219ENST00000600137 SELENOKQ9Y6D0 94 aa10.37□□□□□ -0.75
VRK3-219ENST00000600137 K7EIL1 84 aa10.36□□□□□ -0.75
VRK3-219ENST00000600137 L7N2F9 121 aa10.36□□□□□ -0.75
VRK3-219ENST00000600137 MPC2O95563 127 aa10.36□□□□□ -0.75
VRK3-219ENST00000600137 APOHP02749 345 aaPredicted RBP10.36□□□□□ -0.75
VRK3-219ENST00000600137 PSG1P11464 419 aa10.36□□□□□ -0.75
VRK3-219ENST00000600137 S100A10P60903 97 aa10.36□□□□□ -0.75
VRK3-219ENST00000600137 VAMP2P63027 116 aa10.36□□□□□ -0.75
VRK3-219ENST00000600137 DLK1P80370 383 aa10.36□□□□□ -0.75
VRK3-219ENST00000600137 CD300EQ496F6 205 aaPredicted RBP10.36□□□□□ -0.75
VRK3-219ENST00000600137 TMEM182Q6ZP80 229 aaPredicted RBP10.36□□□□□ -0.75
VRK3-219ENST00000600137 TMEM144Q7Z5S9 345 aa10.36□□□□□ -0.75
VRK3-219ENST00000600137 LILRB2Q8N423 598 aa10.36□□□□□ -0.75
VRK3-219ENST00000600137 MARC2Q969Z3 335 aa10.36□□□□□ -0.75
VRK3-219ENST00000600137 SLC35E1Q96K37 410 aa10.36□□□□□ -0.75
VRK3-219ENST00000600137 TRGV9Q99603 122 aa10.36□□□□□ -0.75
VRK3-219ENST00000600137 C20orf24Q9BUV8 137 aa10.36□□□□□ -0.75
VRK3-219ENST00000600137 MED28Q9H204 178 aa10.36□□□□□ -0.75
VRK3-219ENST00000600137 U3KQE9 123 aa10.36□□□□□ -0.75
VRK3-219ENST00000600137 DNAH9Q9NYC9 4486 aa10.35□□□□□ -0.75
VRK3-219ENST00000600137 IGHV7-4-1A0A0J9YVY3 117 aa10.35□□□□□ -0.75
VRK3-219ENST00000600137 FNDC10F2Z333 226 aa10.35□□□□□ -0.75
VRK3-219ENST00000600137 YIF1AO95070 293 aa10.35□□□□□ -0.75
VRK3-219ENST00000600137 TOMM40O96008 361 aa10.35□□□□□ -0.75
VRK3-219ENST00000600137 RRAS2P62070 204 aaPredicted RBP10.35□□□□□ -0.75
VRK3-219ENST00000600137 OR10P1Q8NGE3 313 aa10.35□□□□□ -0.75
VRK3-219ENST00000600137 TECRQ9NZ01 308 aaKnown RBP10.35□□□□□ -0.75
VRK3-219ENST00000600137 ZNF256Q9Y2P7 627 aaPredicted RBP10.35□□□□□ -0.75
VRK3-219ENST00000600137 TRAV14DV4A0A0A6YYC5 116 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 E5RGE8 158 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 CHEK1O14757 476 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 CST7O76096 145 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 RD3LP0DJH9 198 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 LYL1P12980 280 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 PVALBP20472 110 aaPredicted RBP10.34□□□□□ -0.75
VRK3-219ENST00000600137 CRYBB3P26998 211 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 CAV2P51636 162 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 USF2Q15853 346 aaPredicted RBP10.34□□□□□ -0.75
VRK3-219ENST00000600137 LRRC37A5PQ49AS3 106 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 Q5BKY6 102 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 FAM90A2PQ658T7 463 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 BTNL8Q6UX41 500 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 TMEM61Q8N0U2 210 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 Q8N1Y9 231 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 STPG3Q8N7X2 389 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 OR2K2Q8NGT1 345 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 Q8WTZ3 238 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 CHAC2Q8WUX2 184 aa10.34□□□□□ -0.75
VRK3-219ENST00000600137 PRR25Q96S07 402 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms