RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-222	ENST00000599144	IGHV3OR16-12	A0A075B7B8	117 aa		13.74	□□□□□ -0.21
IRF3-222	ENST00000599144	FAM90A26	D6RGX4	464 aa		13.74	□□□□□ -0.21
IRF3-222	ENST00000599144	HPGDS	O60760	199 aa		13.74	□□□□□ -0.21
IRF3-222	ENST00000599144	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
IRF3-222	ENST00000599144	IGLC1	P0CG04	106 aa		13.74	□□□□□ -0.21
IRF3-222	ENST00000599144	DHODH	Q02127	395 aa		13.74	□□□□□ -0.21
IRF3-222	ENST00000599144	BSX	Q3C1V8	233 aa		13.74	□□□□□ -0.21
IRF3-222	ENST00000599144	PRSS54	Q6PEW0	395 aa		13.74	□□□□□ -0.21
IRF3-222	ENST00000599144	RNASE11	Q8TAA1	199 aa	Known RBP	13.74	□□□□□ -0.21
IRF3-222	ENST00000599144	SMIM31	A0A1B0GVY4	71 aa		13.73	□□□□□ -0.21
IRF3-222	ENST00000599144		H3BMM0	161 aa		13.73	□□□□□ -0.21
IRF3-222	ENST00000599144	NXPH3	O95157	252 aa		13.73	□□□□□ -0.21
IRF3-222	ENST00000599144	RPL5	P46777	297 aa	Known RBP	13.73	□□□□□ -0.21
IRF3-222	ENST00000599144	NCS1	P62166	190 aa		13.73	□□□□□ -0.21
IRF3-222	ENST00000599144	GDF5OS	Q5U4N7	250 aa		13.73	□□□□□ -0.21
IRF3-222	ENST00000599144	LHFPL1	Q86WI0	220 aa		13.73	□□□□□ -0.21
IRF3-222	ENST00000599144	OR4D10	Q8NGI6	311 aa		13.73	□□□□□ -0.21
IRF3-222	ENST00000599144	KLK11	Q9UBX7	282 aa		13.73	□□□□□ -0.21
IRF3-222	ENST00000599144	IFNA10	P01566	189 aa		13.72	□□□□□ -0.21
IRF3-222	ENST00000599144	CD3D	P04234	171 aa		13.72	□□□□□ -0.21
IRF3-222	ENST00000599144	IL4	P05112	153 aa		13.72	□□□□□ -0.21
IRF3-222	ENST00000599144	OR10J1	P30954	320 aa		13.72	□□□□□ -0.21
IRF3-222	ENST00000599144	UBE2DNL	Q8IWF7	75 aa		13.72	□□□□□ -0.21
IRF3-222	ENST00000599144		Q8WTZ3	238 aa		13.72	□□□□□ -0.21
IRF3-222	ENST00000599144	TMEM170A	Q8WVE7	144 aa		13.72	□□□□□ -0.21
IRF3-222	ENST00000599144	APOA1	P02647	267 aa		13.71	□□□□□ -0.21
IRF3-222	ENST00000599144	HTN3	P15516	51 aa		13.71	□□□□□ -0.21
IRF3-222	ENST00000599144	NPY1R	P25929	384 aa		13.71	□□□□□ -0.21
IRF3-222	ENST00000599144	RNASE10	Q5GAN6	216 aa	Known RBP	13.71	□□□□□ -0.21
IRF3-222	ENST00000599144	OR1S2	Q8NGQ3	325 aa		13.71	□□□□□ -0.21
IRF3-222	ENST00000599144	LHFPL5	Q8TAF8	219 aa		13.71	□□□□□ -0.21
IRF3-222	ENST00000599144	RRNAD1	Q96FB5	475 aa	Known RBP	13.71	□□□□□ -0.21
IRF3-222	ENST00000599144	COPZ2	Q9P299	210 aa		13.71	□□□□□ -0.21
IRF3-222	ENST00000599144	TRAV30	A0A087WSZ9	112 aa		13.7	□□□□□ -0.22
IRF3-222	ENST00000599144	SCGB2A1	O75556	95 aa		13.7	□□□□□ -0.22
IRF3-222	ENST00000599144	EIF2B2	P49770	351 aa	Known RBP	13.7	□□□□□ -0.22
IRF3-222	ENST00000599144	VBP1	P61758	197 aa		13.7	□□□□□ -0.22
IRF3-222	ENST00000599144	MEF2D	Q14814	521 aa		13.7	□□□□□ -0.22
IRF3-222	ENST00000599144	LGALS9B	Q3B8N2	356 aa		13.7	□□□□□ -0.22
IRF3-222	ENST00000599144	GPR141	Q7Z602	305 aa		13.7	□□□□□ -0.22
IRF3-222	ENST00000599144	OR13C8	Q8NGS7	320 aa		13.7	□□□□□ -0.22
IRF3-222	ENST00000599144	OR52I2	Q8NH67	350 aa		13.7	□□□□□ -0.22
IRF3-222	ENST00000599144	NPIPB3	Q92617	1050 aa		13.7	□□□□□ -0.22
IRF3-222	ENST00000599144	ZNF486	Q96H40	463 aa	Predicted RBP	13.7	□□□□□ -0.22
IRF3-222	ENST00000599144	ACY3	Q96HD9	319 aa		13.7	□□□□□ -0.22
IRF3-222	ENST00000599144	NRN1	Q9NPD7	142 aa		13.7	□□□□□ -0.22
IRF3-222	ENST00000599144	HEYL	Q9NQ87	328 aa	Predicted RBP	13.7	□□□□□ -0.22
IRF3-222	ENST00000599144	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.69	□□□□□ -0.22
IRF3-222	ENST00000599144	SPART-AS1	P0CW21	52 aa		13.69	□□□□□ -0.22
IRF3-222	ENST00000599144	UCP1	P25874	307 aa		13.69	□□□□□ -0.22
IRF3-222	ENST00000599144	ALDH3B2	P48448	385 aa		13.69	□□□□□ -0.22
IRF3-222	ENST00000599144	SPCS3	P61009	180 aa		13.69	□□□□□ -0.22
IRF3-222	ENST00000599144	SNRPD3	P62318	126 aa	Known RBP	13.69	□□□□□ -0.22
IRF3-222	ENST00000599144	SCGB2B2	Q4G0G5	96 aa		13.69	□□□□□ -0.22
IRF3-222	ENST00000599144	SIGLEC15	Q6ZMC9	328 aa		13.69	□□□□□ -0.22
IRF3-222	ENST00000599144	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.69	□□□□□ -0.22
IRF3-222	ENST00000599144		Q6ZR54	194 aa		13.69	□□□□□ -0.22
IRF3-222	ENST00000599144	MARCH1	Q8TCQ1	289 aa		13.69	□□□□□ -0.22
IRF3-222	ENST00000599144	C1QTNF4	Q9BXJ3	329 aa		13.69	□□□□□ -0.22
IRF3-222	ENST00000599144	FAM25A	B3EWG3	89 aa		13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	FAM25C	B3EWG5	89 aa		13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	FAM25G	B3EWG6	89 aa		13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	BUB3	O43684	328 aa		13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	ATG12	O94817	140 aa		13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	CD74	P04233	296 aa		13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	OR5AC1	P0C628	307 aa		13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	HLA-DRB4	P13762	266 aa		13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	HTR2B	P41595	481 aa		13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	AP2S1	P53680	142 aa	Predicted RBP	13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	YPEL3	P61236	119 aa	Predicted RBP	13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	NUTF2	P61970	127 aa	Known RBP	13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	FAAP20	Q6NZ36	180 aa		13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	OR51G1	Q8NGK1	321 aa		13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	GPR146	Q96CH1	333 aa		13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	LINC00052	Q96N35	136 aa		13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	CACNG5	Q9UF02	275 aa		13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	HLA-DRB4	X5D2U9	266 aa		13.68	□□□□□ -0.22
IRF3-222	ENST00000599144	CEBPZOS	A8MTT3	80 aa		13.67	□□□□□ -0.22
IRF3-222	ENST00000599144	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.67	□□□□□ -0.22
IRF3-222	ENST00000599144	IFNA21	P01568	189 aa		13.67	□□□□□ -0.22
IRF3-222	ENST00000599144	ZNF705D	P0CH99	300 aa	Predicted RBP	13.67	□□□□□ -0.22
IRF3-222	ENST00000599144	ZNF705B	P0CI00	300 aa	Predicted RBP	13.67	□□□□□ -0.22
IRF3-222	ENST00000599144	FAM222A	Q5U5X8	452 aa		13.67	□□□□□ -0.22
IRF3-222	ENST00000599144	SLC24A4	Q8NFF2	622 aa		13.67	□□□□□ -0.22
IRF3-222	ENST00000599144	FUNDC2	Q9BWH2	189 aa		13.67	□□□□□ -0.22
IRF3-222	ENST00000599144	WDR12	Q9GZL7	423 aa	Known RBP	13.67	□□□□□ -0.22
IRF3-222	ENST00000599144	RD3L	P0DJH9	198 aa		13.66	□□□□□ -0.22
IRF3-222	ENST00000599144	C2orf83	Q53S99	150 aa		13.66	□□□□□ -0.22
IRF3-222	ENST00000599144	ARRDC1	Q8N5I2	433 aa		13.66	□□□□□ -0.22
IRF3-222	ENST00000599144	CCDC71L	Q8N9Z2	235 aa		13.66	□□□□□ -0.22
IRF3-222	ENST00000599144	PBDC1	Q9BVG4	233 aa		13.66	□□□□□ -0.22
IRF3-222	ENST00000599144	SLC35B3	Q9H1N7	401 aa		13.66	□□□□□ -0.22
IRF3-222	ENST00000599144	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.66	□□□□□ -0.22
IRF3-222	ENST00000599144	PRR13	Q9NZ81	148 aa		13.66	□□□□□ -0.22
IRF3-222	ENST00000599144	DKK2	Q9UBU2	259 aa		13.66	□□□□□ -0.22
IRF3-222	ENST00000599144	HSPG2	P98160	4391 aa		13.65	□□□□□ -0.22
IRF3-222	ENST00000599144		F6UB75	175 aa		13.65	□□□□□ -0.22
IRF3-222	ENST00000599144	TOMM40	O96008	361 aa		13.65	□□□□□ -0.22
IRF3-222	ENST00000599144	PSG1	P11464	419 aa		13.65	□□□□□ -0.22
IRF3-222	ENST00000599144	SLC25A4	P12235	298 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms