RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 IGHV3-23P01764 117 aa18.21■□□□□ 0.51
SYMPK-212ENST00000598896 FOSL1P15407 271 aa18.21■□□□□ 0.51
SYMPK-212ENST00000598896 M6PRP20645 277 aa18.21■□□□□ 0.51
SYMPK-212ENST00000598896 C15orf32Q32M92 178 aa18.21■□□□□ 0.51
SYMPK-212ENST00000598896 OR10G4Q8NGN3 311 aa18.21■□□□□ 0.51
SYMPK-212ENST00000598896 OR10G9Q8NGN4 311 aa18.21■□□□□ 0.51
SYMPK-212ENST00000598896 OR10G7Q8NGN6 311 aa18.21■□□□□ 0.51
SYMPK-212ENST00000598896 CDC42EP3Q9UKI2 254 aa18.21■□□□□ 0.51
SYMPK-212ENST00000598896 CLN5O75503 358 aa18.2■□□□□ 0.5
SYMPK-212ENST00000598896 TSPAN9O75954 239 aa18.2■□□□□ 0.5
SYMPK-212ENST00000598896 CFHR3Q02985 330 aa18.2■□□□□ 0.5
SYMPK-212ENST00000598896 COMMD7Q86VX2 200 aa18.2■□□□□ 0.5
SYMPK-212ENST00000598896 PRSS22Q9GZN4 317 aa18.2■□□□□ 0.5
SYMPK-212ENST00000598896 ZNF580Q9UK33 172 aa18.2■□□□□ 0.5
SYMPK-212ENST00000598896 MBP02144 154 aa18.2■□□□□ 0.5
SYMPK-212ENST00000598896 ACOT6Q3I5F7 207 aaPredicted RBP18.2■□□□□ 0.5
SYMPK-212ENST00000598896 TRGV9Q99603 122 aa18.2■□□□□ 0.5
SYMPK-212ENST00000598896 MED9Q9NWA0 146 aa18.2■□□□□ 0.5
SYMPK-212ENST00000598896 C21orf62Q9NYP8 219 aa18.2■□□□□ 0.5
SYMPK-212ENST00000598896 A0A1B0GV50 99 aa18.19■□□□□ 0.5
SYMPK-212ENST00000598896 CYSRT1A8MQ03 144 aa18.19■□□□□ 0.5
SYMPK-212ENST00000598896 ATP6V1G1O75348 118 aa18.19■□□□□ 0.5
SYMPK-212ENST00000598896 NECAP1Q8NC96 275 aa18.19■□□□□ 0.5
SYMPK-212ENST00000598896 SLC25A22Q9H936 323 aa18.19■□□□□ 0.5
SYMPK-212ENST00000598896 IGKV1-17P01599 117 aa18.18■□□□□ 0.5
SYMPK-212ENST00000598896 H2AFB1P0C5Y9 115 aa18.18■□□□□ 0.5
SYMPK-212ENST00000598896 SPSB3Q6PJ21 355 aa18.18■□□□□ 0.5
SYMPK-212ENST00000598896 MFAP4P55083 255 aa18.18■□□□□ 0.5
SYMPK-212ENST00000598896 SCGB2A2Q13296 93 aa18.18■□□□□ 0.5
SYMPK-212ENST00000598896 FAM122CQ6P4D5 195 aa18.18■□□□□ 0.5
SYMPK-212ENST00000598896 PFDN2Q9UHV9 154 aa18.18■□□□□ 0.5
SYMPK-212ENST00000598896 INAFM1C9JVW0 142 aa18.17■□□□□ 0.5
SYMPK-212ENST00000598896 TIGITQ495A1 244 aa18.17■□□□□ 0.5
SYMPK-212ENST00000598896 VN1R17PQ8TDU5 208 aa18.17■□□□□ 0.5
SYMPK-212ENST00000598896 SFT2D1Q8WV19 159 aa18.17■□□□□ 0.5
SYMPK-212ENST00000598896 FAM181BA6NEQ2 426 aa18.16■□□□□ 0.5
SYMPK-212ENST00000598896 HMGB3O15347 200 aaKnown RBP18.16■□□□□ 0.5
SYMPK-212ENST00000598896 IGLV1-40P01703 118 aa18.16■□□□□ 0.5
SYMPK-212ENST00000598896 NPBWR1P48145 328 aa18.16■□□□□ 0.5
SYMPK-212ENST00000598896 ZNF329Q86UD4 541 aa18.16■□□□□ 0.5
SYMPK-212ENST00000598896 ZNF502Q8TBZ5 544 aa18.16■□□□□ 0.5
SYMPK-212ENST00000598896 KLK15Q9H2R5 256 aa18.16■□□□□ 0.5
SYMPK-212ENST00000598896 PSMB11A5LHX3 300 aa18.16■□□□□ 0.5
SYMPK-212ENST00000598896 BRI3O95415 125 aa18.16■□□□□ 0.5
SYMPK-212ENST00000598896 TRGV3P03979 118 aa18.16■□□□□ 0.5
SYMPK-212ENST00000598896 SELENOTP62341 195 aa18.16■□□□□ 0.5
SYMPK-212ENST00000598896 CCL20P78556 96 aa18.16■□□□□ 0.5
SYMPK-212ENST00000598896 Q56UQ5 140 aa18.16■□□□□ 0.5
SYMPK-212ENST00000598896 C10orf99Q6UWK7 81 aa18.16■□□□□ 0.5
SYMPK-212ENST00000598896 LCN15Q6UWW0 184 aa18.16■□□□□ 0.5
SYMPK-212ENST00000598896 Q8N2B8 174 aa18.16■□□□□ 0.5
SYMPK-212ENST00000598896 RAB24Q969Q5 203 aa18.16■□□□□ 0.5
SYMPK-212ENST00000598896 SEPSECSQ9HD40 501 aaKnown RBP18.16■□□□□ 0.5
SYMPK-212ENST00000598896 SEC14L6B5MCN3 397 aa18.15■□□□□ 0.5
SYMPK-212ENST00000598896 GNG7O60262 68 aa18.15■□□□□ 0.5
SYMPK-212ENST00000598896 MBD3L1Q8WWY6 194 aa18.15■□□□□ 0.5
SYMPK-212ENST00000598896 CCDC140Q96MF4 163 aa18.15■□□□□ 0.5
SYMPK-212ENST00000598896 CITED4Q96RK1 184 aa18.15■□□□□ 0.5
SYMPK-212ENST00000598896 OR2T8A6NH00 312 aa18.14■□□□□ 0.49
SYMPK-212ENST00000598896 H3BUA1 57 aa18.14■□□□□ 0.49
SYMPK-212ENST00000598896 CLDN34H7C241 214 aa18.14■□□□□ 0.49
SYMPK-212ENST00000598896 CDC34P49427 236 aaPredicted RBP18.14■□□□□ 0.49
SYMPK-212ENST00000598896 FGF8P55075 233 aaPredicted RBP18.14■□□□□ 0.49
SYMPK-212ENST00000598896 TPPP2P59282 170 aa18.14■□□□□ 0.49
SYMPK-212ENST00000598896 LCNL1Q6ZST4 164 aa18.14■□□□□ 0.49
SYMPK-212ENST00000598896 TMEM37Q8WXS4 190 aa18.14■□□□□ 0.49
SYMPK-212ENST00000598896 ACTR3CQ9C0K3 210 aaPredicted RBP18.14■□□□□ 0.49
SYMPK-212ENST00000598896 NSD1Q96L73 2696 aaPredicted RBP18.14■□□□□ 0.49
SYMPK-212ENST00000598896 CTXND1A0A1B0GTU2 59 aa18.14■□□□□ 0.49
SYMPK-212ENST00000598896 MAP1LC3B2A6NCE7 125 aa18.14■□□□□ 0.49
SYMPK-212ENST00000598896 FAM223BA6NKX1 122 aa18.14■□□□□ 0.49
SYMPK-212ENST00000598896 PSG1P11464 419 aa18.14■□□□□ 0.49
SYMPK-212ENST00000598896 FCGR2BP31994 310 aaPredicted RBP18.14■□□□□ 0.49
SYMPK-212ENST00000598896 SPATA31B1PQ5VZV4 182 aa18.14■□□□□ 0.49
SYMPK-212ENST00000598896 FAM223AQ8IWN6 122 aa18.14■□□□□ 0.49
SYMPK-212ENST00000598896 MAP1LC3BQ9GZQ8 125 aa18.14■□□□□ 0.49
SYMPK-212ENST00000598896 DOK5Q9P104 306 aa18.14■□□□□ 0.49
SYMPK-212ENST00000598896 PF4V1P10720 104 aa18.13■□□□□ 0.49
SYMPK-212ENST00000598896 MARC2Q969Z3 335 aa18.13■□□□□ 0.49
SYMPK-212ENST00000598896 TRAV1-1A0A0B4J248 108 aa18.12■□□□□ 0.49
SYMPK-212ENST00000598896 IGHG4P01861 327 aa18.12■□□□□ 0.49
SYMPK-212ENST00000598896 CTSGP08311 255 aa18.12■□□□□ 0.49
SYMPK-212ENST00000598896 PATE2Q6UY27 113 aa18.12■□□□□ 0.49
SYMPK-212ENST00000598896 TXN2Q99757 166 aa18.12■□□□□ 0.49
SYMPK-212ENST00000598896 SERTAD4Q9NUC0 356 aa18.12■□□□□ 0.49
SYMPK-212ENST00000598896 A0A1W2PPV4 95 aa18.12■□□□□ 0.49
SYMPK-212ENST00000598896 GPR183P32249 361 aa18.12■□□□□ 0.49
SYMPK-212ENST00000598896 ADMP35318 185 aa18.12■□□□□ 0.49
SYMPK-212ENST00000598896 HILS1P60008 231 aa18.12■□□□□ 0.49
SYMPK-212ENST00000598896 ATP5G2Q06055 141 aa18.12■□□□□ 0.49
SYMPK-212ENST00000598896 IL34Q6ZMJ4 242 aa18.12■□□□□ 0.49
SYMPK-212ENST00000598896 ZNF418Q8TF45 676 aaPredicted RBP18.12■□□□□ 0.49
SYMPK-212ENST00000598896 EEF1AKMT3Q96AZ1 226 aa18.12■□□□□ 0.49
SYMPK-212ENST00000598896 CHRDL1Q9BU40 450 aa18.12■□□□□ 0.49
SYMPK-212ENST00000598896 NF1P21359 2839 aa18.11■□□□□ 0.49
SYMPK-212ENST00000598896 TRAV30A0A087WSZ9 112 aa18.11■□□□□ 0.49
SYMPK-212ENST00000598896 PSMB8P28062 276 aa18.11■□□□□ 0.49
SYMPK-212ENST00000598896 FAM78BQ5VT40 261 aa18.11■□□□□ 0.49
SYMPK-212ENST00000598896 CLEC3BP05452 202 aa18.1■□□□□ 0.49
SYMPK-212ENST00000598896 RNASE1P07998 156 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms