RNA–Protein interactions for RNA: ENST00000598619.1

HMGN2P46-208, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, human

BASIC

Gene HMGN2P46, Length 490 nt, Biotype transcribed processed pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN2P46-208	ENST00000598619	CITED4	Q96RK1	184 aa		6.61	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	FAM110A	Q9BQ89	295 aa		6.61	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	GGTLC1	Q9BX51	225 aa		6.61	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	ZFAND3	Q9H8U3	227 aa		6.61	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	FLVCR2	Q9UPI3	526 aa		6.61	□□□□□ -1.35
HMGN2P46-208	ENST00000598619		A0A1W2PS18	150 aa		6.6	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	MED6	O75586	246 aa		6.6	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	DFFB	O76075	338 aa		6.6	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	NDUFB6	O95139	128 aa		6.6	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	IAPP	P10997	89 aa		6.6	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	IL7	P13232	177 aa		6.6	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	OR10J1	P30954	320 aa		6.6	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	CMC4	P56277	68 aa	Predicted RBP	6.6	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	LRTM2	Q8N967	370 aa		6.6	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	OR1S2	Q8NGQ3	325 aa		6.6	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	TMEM170A	Q8WVE7	144 aa		6.6	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	NPIPB3	Q92617	1050 aa		6.6	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	METTL26	Q96S19	204 aa		6.6	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	SDHC	Q99643	169 aa	Predicted RBP	6.6	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	TMEM231	Q9H6L2	316 aa		6.6	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	TMED3	Q9Y3Q3	217 aa		6.6	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	C9orf170	A2RU37	121 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	WRB	O00258	174 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	PITX3	O75364	302 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	IFNA21	P01568	189 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	CD5	P06127	495 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	LYL1	P12980	280 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	RPL35A	P18077	110 aa	Known RBP	6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	APOC4	P55056	127 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	ATP5I	P56385	69 aa	Predicted RBP	6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	UBE2M	P61081	183 aa	Known RBP	6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	RAB11A	P62491	216 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	RPP30	P78346	268 aa	Known RBP	6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	ODF3L2	Q3SX64	289 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	C4orf46	Q504U0	113 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	GGNBP1	Q5YKI7	109 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	APRG1	Q8IVJ8	170 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	LILRB2	Q8N423	598 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	COQ8A	Q8NI60	647 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	GRAMD2B	Q96HH9	432 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	SLC35E1	Q96K37	410 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	C7orf50	Q9BRJ6	194 aa	Known RBP	6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	MAGT1	Q9H0U3	335 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	MS4A6A	Q9H2W1	248 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	VSIR	Q9H7M9	311 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	RABAC1	Q9UI14	185 aa		6.59	□□□□□ -1.35
HMGN2P46-208	ENST00000598619	ZFP92	A6NM28	416 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	FAM90A26	D6RGX4	464 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	SYNGR2	O43760	224 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	ADAP1	O75689	374 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	IGKV1-17	P01599	117 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	IL4	P05112	153 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	HNRNPC	P07910	306 aa	Known RBP eCLIP	6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	OR4E1	P0C645	316 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	IGLC1	P0CG04	106 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	RD3L	P0DJH9	198 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	SLC25A6	P12236	298 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	ANXA7	P20073	488 aa	Known RBP	6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	GPX4	P36969	197 aa	Predicted RBP	6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	P2RY1	P47900	373 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	YPEL3	P61236	119 aa	Predicted RBP	6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	ZNF124	Q15973	351 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	FAM90A2P	Q658T7	463 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	ZFAND6	Q6FIF0	208 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	STPG3	Q8N7X2	389 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	STXBP6	Q8NFX7	210 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	EDA2R	Q9HAV5	297 aa		6.58	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	LYRM1	O43325	122 aa		6.57	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	TOMM40	O96008	361 aa		6.57	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	PSG1	P11464	419 aa		6.57	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	CRYBB3	P26998	211 aa		6.57	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	BTC	P35070	178 aa		6.57	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	EIF2B2	P49770	351 aa	Known RBP	6.57	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	DHRS2	Q13268	280 aa		6.57	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	GAMT	Q14353	236 aa		6.57	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	CNPY1	Q3B7I2	92 aa		6.57	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	SPANXN5	Q5MJ07	72 aa		6.57	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	CASC10	Q5T4H9	136 aa		6.57	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	LYG2	Q86SG7	212 aa		6.57	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	CIB3	Q96Q77	187 aa	Predicted RBP	6.57	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	PBDC1	Q9BVG4	233 aa		6.57	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	MAP6D1	Q9H9H5	199 aa		6.57	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	TRAV6	A0A075B6T7	132 aa		6.56	□□□□□ -1.36
HMGN2P46-208	ENST00000598619		H3BP45	60 aa		6.56	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	UBE2C	O00762	179 aa		6.56	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	PLA2G10	O15496	165 aa		6.56	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	SPRY2	O43597	315 aa		6.56	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	SCGB1D2	O95969	90 aa		6.56	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	FABP1	P07148	127 aa		6.56	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	NKX2-1	P43699	371 aa	Predicted RBP	6.56	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	AP2S1	P53680	142 aa	Predicted RBP	6.56	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	DEFB131A	P59861	70 aa		6.56	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	LEMD1	Q68G75	181 aa		6.56	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	OR51G1	Q8NGK1	321 aa		6.56	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	OVOL2	Q9BRP0	275 aa		6.56	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	C20orf85	Q9H1P6	137 aa		6.56	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	GSKIP	Q9P0R6	139 aa		6.56	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	STRAP	Q9Y3F4	350 aa	Known RBP	6.56	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	HUWE1	Q7Z6Z7	4374 aa	Known RBP	6.55	□□□□□ -1.36
HMGN2P46-208	ENST00000598619	TRAV2	A0A0B4J234	112 aa		6.55	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms