RNA–Protein interactions for RNA: ENST00000598474.3

SOX2-OT-229, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 515 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-229ENST00000598474 RAB11AP62491 216 aa10.22□□□□□ -0.77
SOX2-OT-229ENST00000598474 DCTN2Q13561 401 aaKnown RBP10.22□□□□□ -0.77
SOX2-OT-229ENST00000598474 SPANXN5Q5MJ07 72 aa10.22□□□□□ -0.77
SOX2-OT-229ENST00000598474 MARVELD1Q9BSK0 173 aa10.22□□□□□ -0.77
SOX2-OT-229ENST00000598474 PAIP2BQ9ULR5 123 aaKnown RBP10.22□□□□□ -0.77
SOX2-OT-229ENST00000598474 RCL1Q9Y2P8 373 aaKnown RBP10.22□□□□□ -0.77
SOX2-OT-229ENST00000598474 TRAV30A0A087WSZ9 112 aa10.21□□□□□ -0.77
SOX2-OT-229ENST00000598474 IGHV3-49A0A0A0MS15 119 aa10.21□□□□□ -0.77
SOX2-OT-229ENST00000598474 IGHV7-4-1A0A0J9YVY3 117 aa10.21□□□□□ -0.77
SOX2-OT-229ENST00000598474 FAM25EA8MYX2 175 aa10.21□□□□□ -0.77
SOX2-OT-229ENST00000598474 INMT-MINDY4F8WBC2 141 aa10.21□□□□□ -0.77
SOX2-OT-229ENST00000598474 MBPP02686 304 aaPredicted RBP10.21□□□□□ -0.77
SOX2-OT-229ENST00000598474 GPX4P36969 197 aaPredicted RBP10.21□□□□□ -0.77
SOX2-OT-229ENST00000598474 PAX9P55771 341 aa10.21□□□□□ -0.77
SOX2-OT-229ENST00000598474 RPP30P78346 268 aaKnown RBP10.21□□□□□ -0.77
SOX2-OT-229ENST00000598474 GAMTQ14353 236 aa10.21□□□□□ -0.77
SOX2-OT-229ENST00000598474 GUCA2BQ16661 112 aa10.21□□□□□ -0.77
SOX2-OT-229ENST00000598474 OR1S2Q8NGQ3 325 aa10.21□□□□□ -0.77
SOX2-OT-229ENST00000598474 SMPXQ9UHP9 88 aa10.21□□□□□ -0.77
SOX2-OT-229ENST00000598474 SMAD5-AS1Q9Y6J3 95 aa10.21□□□□□ -0.77
SOX2-OT-229ENST00000598474 TRAV14DV4A0A0A6YYC5 116 aa10.2□□□□□ -0.78
SOX2-OT-229ENST00000598474 C5orf51A6NDU8 294 aa10.2□□□□□ -0.78
SOX2-OT-229ENST00000598474 PRAF2O60831 178 aa10.2□□□□□ -0.78
SOX2-OT-229ENST00000598474 SCGB2A1O75556 95 aa10.2□□□□□ -0.78
SOX2-OT-229ENST00000598474 SCAF4O95104 1147 aaKnown RBP10.2□□□□□ -0.78
SOX2-OT-229ENST00000598474 SMIM8Q96KF7 97 aa10.2□□□□□ -0.78
SOX2-OT-229ENST00000598474 B9D2Q9BPU9 175 aa10.2□□□□□ -0.78
SOX2-OT-229ENST00000598474 GINS3Q9BRX5 216 aa10.2□□□□□ -0.78
SOX2-OT-229ENST00000598474 RHPN1-AS1Q9BWJ2 59 aa10.2□□□□□ -0.78
SOX2-OT-229ENST00000598474 GPN1Q9HCN4 374 aaPredicted RBP10.2□□□□□ -0.78
SOX2-OT-229ENST00000598474 PSENENQ9NZ42 101 aa10.2□□□□□ -0.78
SOX2-OT-229ENST00000598474 STRAPQ9Y3F4 350 aaKnown RBP10.2□□□□□ -0.78
SOX2-OT-229ENST00000598474 IGKV1D-37A0A075B6S9 117 aa10.19□□□□□ -0.78
SOX2-OT-229ENST00000598474 IGHV3OR16-13A0A075B7E8 117 aa10.19□□□□□ -0.78
SOX2-OT-229ENST00000598474 IGHV3-74A0A0B4J1X5 117 aa10.19□□□□□ -0.78
SOX2-OT-229ENST00000598474 SNRPGP15A8MWD9 76 aa10.19□□□□□ -0.78
SOX2-OT-229ENST00000598474 CHEK1O14757 476 aa10.19□□□□□ -0.78
SOX2-OT-229ENST00000598474 APOHP02749 345 aaPredicted RBP10.19□□□□□ -0.78
SOX2-OT-229ENST00000598474 CD7P09564 240 aa10.19□□□□□ -0.78
SOX2-OT-229ENST00000598474 IGHV4-30-4P0DP06 118 aa10.19□□□□□ -0.78
SOX2-OT-229ENST00000598474 YPEL3P61236 119 aaPredicted RBP10.19□□□□□ -0.78
SOX2-OT-229ENST00000598474 GTSCR1Q86UQ5 136 aa10.19□□□□□ -0.78
SOX2-OT-229ENST00000598474 SLC35E1Q96K37 410 aa10.19□□□□□ -0.78
SOX2-OT-229ENST00000598474 C2orf50Q96LR7 162 aa10.19□□□□□ -0.78
SOX2-OT-229ENST00000598474 RAB40CQ96S21 281 aa10.19□□□□□ -0.78
SOX2-OT-229ENST00000598474 RNF2Q99496 336 aa10.19□□□□□ -0.78
SOX2-OT-229ENST00000598474 TRAV25A0A0B4J276 109 aa10.18□□□□□ -0.78
SOX2-OT-229ENST00000598474 C7orf66A4D0T2 115 aa10.18□□□□□ -0.78
SOX2-OT-229ENST00000598474 PMS2P5A8MQ11 134 aa10.18□□□□□ -0.78
SOX2-OT-229ENST00000598474 CCNKO75909 580 aa10.18□□□□□ -0.78
SOX2-OT-229ENST00000598474 CD81P60033 236 aa10.18□□□□□ -0.78
SOX2-OT-229ENST00000598474 IL15RAQ13261 267 aa10.18□□□□□ -0.78
SOX2-OT-229ENST00000598474 TMEM14EPQ6UXP3 125 aa10.18□□□□□ -0.78
SOX2-OT-229ENST00000598474 GSG1LQ6UXU4 331 aa10.18□□□□□ -0.78
SOX2-OT-229ENST00000598474 RBPMS2Q6ZRY4 209 aaKnown RBP10.18□□□□□ -0.78
SOX2-OT-229ENST00000598474 LILRB2Q8N423 598 aa10.18□□□□□ -0.78
SOX2-OT-229ENST00000598474 ST8SIA2Q92186 375 aa10.18□□□□□ -0.78
SOX2-OT-229ENST00000598474 NEURL2Q9BR09 285 aa10.18□□□□□ -0.78
SOX2-OT-229ENST00000598474 IGKV1OR2-108A0A075B7D4 117 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 IGHV3-66A0A0C4DH42 116 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 K7EPK0 472 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 TSPAN4O14817 238 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 SIX6O95475 246 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 TOMM40O96008 361 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 FRMD6-AS1P0C7T7 363 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 METTL15P1P0C7V9 234 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 RD3LP0DJH9 198 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 PSG1P11464 419 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 CRYBB3P26998 211 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 TAS2R30P59541 319 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 ZNF90Q03938 601 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 OR8G2PQ6IF36 304 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 ACOT7LQ6ZUV0 252 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 Q8WTZ3 238 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 WFDC10AQ9H1F0 79 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 C11orf1Q9H5F2 150 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 VSIRQ9H7M9 311 aa10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 LSM5Q9Y4Y9 91 aaKnown RBP10.17□□□□□ -0.78
SOX2-OT-229ENST00000598474 ZFP92A6NM28 416 aa10.16□□□□□ -0.78
SOX2-OT-229ENST00000598474 A8MZ25 164 aa10.16□□□□□ -0.78
SOX2-OT-229ENST00000598474 GOSR2O14653 212 aa10.16□□□□□ -0.78
SOX2-OT-229ENST00000598474 TSC22D2O75157 780 aa10.16□□□□□ -0.78
SOX2-OT-229ENST00000598474 PTTG1O95997 202 aa10.16□□□□□ -0.78
SOX2-OT-229ENST00000598474 IL4P05112 153 aa10.16□□□□□ -0.78
SOX2-OT-229ENST00000598474 NPPCP23582 126 aa10.16□□□□□ -0.78
SOX2-OT-229ENST00000598474 USF2Q15853 346 aaPredicted RBP10.16□□□□□ -0.78
SOX2-OT-229ENST00000598474 FAM90A2PQ658T7 463 aa10.16□□□□□ -0.78
SOX2-OT-229ENST00000598474 LAMTOR1Q6IAA8 161 aa10.16□□□□□ -0.78
SOX2-OT-229ENST00000598474 THAP8Q8NA92 274 aa10.16□□□□□ -0.78
SOX2-OT-229ENST00000598474 METTL26Q96S19 204 aa10.16□□□□□ -0.78
SOX2-OT-229ENST00000598474 SPAG8Q99932 426 aaPredicted RBP10.16□□□□□ -0.78
SOX2-OT-229ENST00000598474 C19orf73Q9NVV2 129 aa10.16□□□□□ -0.78
SOX2-OT-229ENST00000598474 S100A10P60903 97 aa10.15□□□□□ -0.78
SOX2-OT-229ENST00000598474 ARL16Q0P5N6 197 aa10.15□□□□□ -0.78
SOX2-OT-229ENST00000598474 RAB32Q13637 225 aa10.15□□□□□ -0.78
SOX2-OT-229ENST00000598474 DEFB125Q8N687 156 aa10.15□□□□□ -0.78
SOX2-OT-229ENST00000598474 TRGV9Q99603 122 aa10.15□□□□□ -0.78
SOX2-OT-229ENST00000598474 ASCL2Q99929 193 aa10.15□□□□□ -0.78
SOX2-OT-229ENST00000598474 U3KQE9 123 aa10.15□□□□□ -0.78
SOX2-OT-229ENST00000598474 IGKV3-7A0A075B6H7 116 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms