RNA–Protein interactions for RNA: ENST00000597297.1

PDE4C-210, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-210ENST00000597297 SNAPINO95295 136 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 MT-CO2P00403 227 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 IGHV3-48P01763 117 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 STAG3L2P0CL84 134 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 STAG3L3P0CL85 134 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 IGHV4-38-2P0DP08 117 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 HNF1AP20823 631 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 SRP14P37108 136 aaKnown RBP9.31□□□□□ -0.92
PDE4C-210ENST00000597297 RHOBP62745 196 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 NDPQ00604 133 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 BRD3OSQ6XYD6 125 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 OR1L6Q8NGR2 347 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 RASL11BQ9BPW5 248 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 SLC25A33Q9BSK2 321 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 WNT10AQ9GZT5 417 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 MANBALQ9NQG1 85 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 VAX2Q9UIW0 290 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 A0A0U1RQK1 487 aa9.3□□□□□ -0.92
PDE4C-210ENST00000597297 NPIPB5A8MRT5 1133 aa9.3□□□□□ -0.92
PDE4C-210ENST00000597297 HLA-DRB1P01911 266 aa9.3□□□□□ -0.92
PDE4C-210ENST00000597297 GATA2P23769 480 aaPredicted RBP9.3□□□□□ -0.92
PDE4C-210ENST00000597297 TAGLN2P37802 199 aaKnown RBP9.3□□□□□ -0.92
PDE4C-210ENST00000597297 PSMB3P49720 205 aa9.3□□□□□ -0.92
PDE4C-210ENST00000597297 SOHLH1Q5JUK2 328 aa9.3□□□□□ -0.92
PDE4C-210ENST00000597297 SPATA31B1PQ5VZV4 182 aa9.3□□□□□ -0.92
PDE4C-210ENST00000597297 SLC35E3Q7Z769 313 aa9.3□□□□□ -0.92
PDE4C-210ENST00000597297 IQCF2Q8IXL9 164 aa9.3□□□□□ -0.92
PDE4C-210ENST00000597297 TMEM116Q8NCL8 245 aa9.3□□□□□ -0.92
PDE4C-210ENST00000597297 MEGF9Q9H1U4 602 aa9.3□□□□□ -0.92
PDE4C-210ENST00000597297 IGHV7-81A0A0B4J1V7 117 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 I3L2K1 104 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 CXorf1O96002 111 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 FBP1P09467 338 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 NPBWR1P48145 328 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 SELENOTP62341 195 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 KLF17Q5JT82 389 aaPredicted RBP9.29□□□□□ -0.92
PDE4C-210ENST00000597297 ASPHD1Q5U4P2 390 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 CYB561D1Q8N8Q1 229 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 C19orf24Q9BVV8 132 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 SEPSECSQ9HD40 501 aaKnown RBP9.29□□□□□ -0.92
PDE4C-210ENST00000597297 FUT9Q9Y231 359 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 IGHV3-21A0A0B4J1V1 117 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 OR5G3P0C626 314 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 ARL14EPLP0DKL9 152 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 MEF2BQ02080 365 aaPredicted RBP9.29□□□□□ -0.92
PDE4C-210ENST00000597297 BTN1A1Q13410 526 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 FAM78BQ5VT40 261 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 TTC9CQ8N5M4 171 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 CLRN3Q8NCR9 226 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 NANPQ8TBE9 248 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 GATAD1Q8WUU5 269 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 TRGV9Q99603 122 aa9.29□□□□□ -0.92
PDE4C-210ENST00000597297 FSHBP01225 129 aa9.28□□□□□ -0.92
PDE4C-210ENST00000597297 EGR2P11161 476 aaPredicted RBP9.28□□□□□ -0.92
PDE4C-210ENST00000597297 CEBPGP53567 150 aa9.28□□□□□ -0.92
PDE4C-210ENST00000597297 ZNF90Q03938 601 aa9.28□□□□□ -0.92
PDE4C-210ENST00000597297 MIR17HGQ75NE6 70 aa9.28□□□□□ -0.92
PDE4C-210ENST00000597297 PIFOQ8TCI5 191 aa9.28□□□□□ -0.92
PDE4C-210ENST00000597297 RBM14Q96PK6 669 aaKnown RBP9.28□□□□□ -0.92
PDE4C-210ENST00000597297 RNF2Q99496 336 aa9.28□□□□□ -0.92
PDE4C-210ENST00000597297 HSPB9Q9BQS6 159 aa9.28□□□□□ -0.92
PDE4C-210ENST00000597297 MRPL32Q9BYC8 188 aaKnown RBP9.28□□□□□ -0.92
PDE4C-210ENST00000597297 TNFRSF19Q9NS68 423 aa9.28□□□□□ -0.92
PDE4C-210ENST00000597297 MOB4Q9Y3A3 225 aa9.28□□□□□ -0.92
PDE4C-210ENST00000597297 IGLV11-55A0A075B6I3 123 aa9.27□□□□□ -0.93
PDE4C-210ENST00000597297 PSMB11A5LHX3 300 aa9.27□□□□□ -0.93
PDE4C-210ENST00000597297 K7EIM0 57 aa9.27□□□□□ -0.93
PDE4C-210ENST00000597297 DNASE2O00115 360 aaPredicted RBP9.27□□□□□ -0.93
PDE4C-210ENST00000597297 PAGE4O60829 102 aa9.27□□□□□ -0.93
PDE4C-210ENST00000597297 NDUFS6O75380 124 aaKnown RBP9.27□□□□□ -0.93
PDE4C-210ENST00000597297 CD81P60033 236 aa9.27□□□□□ -0.93
PDE4C-210ENST00000597297 SRSF2Q01130 221 aaKnown RBP9.27□□□□□ -0.93
PDE4C-210ENST00000597297 C5orf56Q8N8D9 126 aa9.27□□□□□ -0.93
PDE4C-210ENST00000597297 OR1L4Q8NGR5 311 aa9.27□□□□□ -0.93
PDE4C-210ENST00000597297 OR4X1Q8NH49 305 aa9.27□□□□□ -0.93
PDE4C-210ENST00000597297 PFDN5Q99471 154 aa9.27□□□□□ -0.93
PDE4C-210ENST00000597297 SSX3Q99909 188 aa9.27□□□□□ -0.93
PDE4C-210ENST00000597297 TECRQ9NZ01 308 aaKnown RBP9.27□□□□□ -0.93
PDE4C-210ENST00000597297 SOX21Q9Y651 276 aaPredicted RBP9.27□□□□□ -0.93
PDE4C-210ENST00000597297 COX7A2P2O60397 106 aa9.26□□□□□ -0.93
PDE4C-210ENST00000597297 GCHFRP30047 84 aa9.26□□□□□ -0.93
PDE4C-210ENST00000597297 BPIFB3P59826 476 aa9.26□□□□□ -0.93
PDE4C-210ENST00000597297 FAM90A2PQ658T7 463 aa9.26□□□□□ -0.93
PDE4C-210ENST00000597297 TMEM219Q86XT9 240 aa9.26□□□□□ -0.93
PDE4C-210ENST00000597297 BCL6BQ8N143 479 aaPredicted RBP9.26□□□□□ -0.93
PDE4C-210ENST00000597297 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.26□□□□□ -0.93
PDE4C-210ENST00000597297 SGMS2Q8NHU3 365 aa9.26□□□□□ -0.93
PDE4C-210ENST00000597297 TMEM37Q8WXS4 190 aa9.26□□□□□ -0.93
PDE4C-210ENST00000597297 FANCD2OSQ96PS1 177 aa9.26□□□□□ -0.93
PDE4C-210ENST00000597297 DNAJC4Q9NNZ3 241 aa9.26□□□□□ -0.93
PDE4C-210ENST00000597297 FAM74A7A6NL05 159 aa9.25□□□□□ -0.93
PDE4C-210ENST00000597297 CLN5O75503 358 aa9.25□□□□□ -0.93
PDE4C-210ENST00000597297 IGLC1P0CG04 106 aa9.25□□□□□ -0.93
PDE4C-210ENST00000597297 TAS2R45P59539 299 aa9.25□□□□□ -0.93
PDE4C-210ENST00000597297 UBE2G2P60604 165 aa9.25□□□□□ -0.93
PDE4C-210ENST00000597297 FAM74A3Q4VXF1 159 aa9.25□□□□□ -0.93
PDE4C-210ENST00000597297 AWAT1Q58HT5 328 aa9.25□□□□□ -0.93
PDE4C-210ENST00000597297 C10orf113Q5VZT2 155 aa9.25□□□□□ -0.93
PDE4C-210ENST00000597297 OR4F5Q8NH21 305 aa9.25□□□□□ -0.93
PDE4C-210ENST00000597297 FAM110DQ8TAY7 271 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms