RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 TMEM170AQ8WVE7 144 aa13.22□□□□□ -0.29
CHMP2A-203ENST00000597209 TRIM63Q969Q1 353 aa13.22□□□□□ -0.29
CHMP2A-203ENST00000597209 METTL26Q96S19 204 aa13.22□□□□□ -0.29
CHMP2A-203ENST00000597209 CSTL1Q9H114 145 aa13.22□□□□□ -0.29
CHMP2A-203ENST00000597209 MS4A6AQ9H2W1 248 aa13.22□□□□□ -0.29
CHMP2A-203ENST00000597209 DNASE2O00115 360 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-203ENST00000597209 JTBO76095 146 aa13.21□□□□□ -0.29
CHMP2A-203ENST00000597209 IGLC1P0CG04 106 aa13.21□□□□□ -0.29
CHMP2A-203ENST00000597209 YPEL3P61236 119 aaPredicted RBP13.21□□□□□ -0.29
CHMP2A-203ENST00000597209 SMCO1Q147U7 214 aa13.21□□□□□ -0.29
CHMP2A-203ENST00000597209 TIGITQ495A1 244 aa13.21□□□□□ -0.29
CHMP2A-203ENST00000597209 LYG2Q86SG7 212 aa13.21□□□□□ -0.29
CHMP2A-203ENST00000597209 HSPB7Q9UBY9 170 aa13.21□□□□□ -0.29
CHMP2A-203ENST00000597209 U3KQ87 197 aa13.21□□□□□ -0.29
CHMP2A-203ENST00000597209 V9GYH0 126 aa13.21□□□□□ -0.29
CHMP2A-203ENST00000597209 IGHV3-66A0A0C4DH42 116 aa13.2□□□□□ -0.3
CHMP2A-203ENST00000597209 A0A0J9YWU9 116 aa13.2□□□□□ -0.3
CHMP2A-203ENST00000597209 MPTX1A8MV57 137 aa13.2□□□□□ -0.3
CHMP2A-203ENST00000597209 NPY1RP25929 384 aa13.2□□□□□ -0.3
CHMP2A-203ENST00000597209 RND2P52198 227 aa13.2□□□□□ -0.3
CHMP2A-203ENST00000597209 ATP5IP56385 69 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-203ENST00000597209 ZNF124Q15973 351 aa13.2□□□□□ -0.3
CHMP2A-203ENST00000597209 PYDC2Q56P42 97 aa13.2□□□□□ -0.3
CHMP2A-203ENST00000597209 LYZL2Q7Z4W2 148 aa13.2□□□□□ -0.3
CHMP2A-203ENST00000597209 TOMM5Q8N4H5 51 aa13.2□□□□□ -0.3
CHMP2A-203ENST00000597209 Q8WTZ3 238 aa13.2□□□□□ -0.3
CHMP2A-203ENST00000597209 NARS2Q96I59 477 aaKnown RBP13.2□□□□□ -0.3
CHMP2A-203ENST00000597209 PRR13Q9NZ81 148 aa13.2□□□□□ -0.3
CHMP2A-203ENST00000597209 U3KQE9 123 aa13.2□□□□□ -0.3
CHMP2A-203ENST00000597209 DUXBA0A1W2PPF3 345 aa13.19□□□□□ -0.3
CHMP2A-203ENST00000597209 OR10J1P30954 320 aa13.19□□□□□ -0.3
CHMP2A-203ENST00000597209 S100A5P33763 92 aa13.19□□□□□ -0.3
CHMP2A-203ENST00000597209 RPL11P62913 178 aaKnown RBP13.19□□□□□ -0.3
CHMP2A-203ENST00000597209 ZNF79Q15937 498 aa13.19□□□□□ -0.3
CHMP2A-203ENST00000597209 TMEM128Q5BJH2 165 aa13.19□□□□□ -0.3
CHMP2A-203ENST00000597209 GATAD1Q8WUU5 269 aa13.19□□□□□ -0.3
CHMP2A-203ENST00000597209 GRAMD2BQ96HH9 432 aa13.19□□□□□ -0.3
CHMP2A-203ENST00000597209 SLC25A21Q9BQT8 299 aaPredicted RBP13.19□□□□□ -0.3
CHMP2A-203ENST00000597209 DNAH1Q9P2D7 4330 aa13.19□□□□□ -0.3
CHMP2A-203ENST00000597209 ZNF701M0R085 212 aaPredicted RBP13.18□□□□□ -0.3
CHMP2A-203ENST00000597209 P2RY1P47900 373 aa13.18□□□□□ -0.3
CHMP2A-203ENST00000597209 DEFB131AP59861 70 aa13.18□□□□□ -0.3
CHMP2A-203ENST00000597209 CCDC190Q86UF4 302 aa13.18□□□□□ -0.3
CHMP2A-203ENST00000597209 TMEM217Q8N7C4 229 aa13.18□□□□□ -0.3
CHMP2A-203ENST00000597209 DTD1Q8TEA8 209 aa13.18□□□□□ -0.3
CHMP2A-203ENST00000597209 RBM38Q9H0Z9 239 aaKnown RBP13.18□□□□□ -0.3
CHMP2A-203ENST00000597209 CCDC160A6NGH7 325 aa13.17□□□□□ -0.3
CHMP2A-203ENST00000597209 K7EQG2 157 aa13.17□□□□□ -0.3
CHMP2A-203ENST00000597209 NXPH3O95157 252 aa13.17□□□□□ -0.3
CHMP2A-203ENST00000597209 IFNA10P01566 189 aa13.17□□□□□ -0.3
CHMP2A-203ENST00000597209 HNRNPCP07910 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
CHMP2A-203ENST00000597209 RBMS2Q15434 407 aaKnown RBP13.17□□□□□ -0.3
CHMP2A-203ENST00000597209 LRTM2Q8N967 370 aa13.17□□□□□ -0.3
CHMP2A-203ENST00000597209 NPIPB3Q92617 1050 aa13.17□□□□□ -0.3
CHMP2A-203ENST00000597209 RBKSQ9H477 322 aa13.17□□□□□ -0.3
CHMP2A-203ENST00000597209 RABAC1Q9UI14 185 aa13.17□□□□□ -0.3
CHMP2A-203ENST00000597209 PITX3O75364 302 aa13.16□□□□□ -0.3
CHMP2A-203ENST00000597209 SLC25A6P12236 298 aa13.16□□□□□ -0.3
CHMP2A-203ENST00000597209 EIF2B2P49770 351 aaKnown RBP13.16□□□□□ -0.3
CHMP2A-203ENST00000597209 EWSR1Q01844 656 aaKnown RBP eCLIP13.16□□□□□ -0.3
CHMP2A-203ENST00000597209 FAM24BQ8N5W8 94 aa13.16□□□□□ -0.3
CHMP2A-203ENST00000597209 NUPR2A6NF83 97 aa13.15□□□□□ -0.3
CHMP2A-203ENST00000597209 HELTA6NFD8 242 aa13.15□□□□□ -0.3
CHMP2A-203ENST00000597209 TOMM40O96008 361 aa13.15□□□□□ -0.3
CHMP2A-203ENST00000597209 GPX4P36969 197 aaPredicted RBP13.15□□□□□ -0.3
CHMP2A-203ENST00000597209 AP2S1P53680 142 aaPredicted RBP13.15□□□□□ -0.3
CHMP2A-203ENST00000597209 C16orf54Q6UWD8 224 aa13.15□□□□□ -0.3
CHMP2A-203ENST00000597209 TMED4Q7Z7H5 227 aa13.15□□□□□ -0.3
CHMP2A-203ENST00000597209 STXBP6Q8NFX7 210 aa13.15□□□□□ -0.3
CHMP2A-203ENST00000597209 OR1S1Q8NH92 325 aa13.15□□□□□ -0.3
CHMP2A-203ENST00000597209 DCANP1Q8TF63 244 aa13.15□□□□□ -0.3
CHMP2A-203ENST00000597209 RD3LP0DJH9 198 aa13.14□□□□□ -0.31
CHMP2A-203ENST00000597209 LEMD1Q68G75 181 aa13.14□□□□□ -0.31
CHMP2A-203ENST00000597209 GLMPQ8WWB7 406 aa13.14□□□□□ -0.31
CHMP2A-203ENST00000597209 ACY3Q96HD9 319 aa13.14□□□□□ -0.31
CHMP2A-203ENST00000597209 RARRES2Q99969 163 aa13.14□□□□□ -0.31
CHMP2A-203ENST00000597209 CXorf65A6NEN9 183 aa13.13□□□□□ -0.31
CHMP2A-203ENST00000597209 FAM90A26D6RGX4 464 aa13.13□□□□□ -0.31
CHMP2A-203ENST00000597209 SFT2D2O95562 160 aa13.13□□□□□ -0.31
CHMP2A-203ENST00000597209 IFNA4P05014 189 aa13.13□□□□□ -0.31
CHMP2A-203ENST00000597209 IL4P05112 153 aa13.13□□□□□ -0.31
CHMP2A-203ENST00000597209 USF2Q15853 346 aaPredicted RBP13.13□□□□□ -0.31
CHMP2A-203ENST00000597209 STHQ8IWL8 128 aa13.13□□□□□ -0.31
CHMP2A-203ENST00000597209 SEPSECSQ9HD40 501 aaKnown RBP13.13□□□□□ -0.31
CHMP2A-203ENST00000597209 TMED3Q9Y3Q3 217 aa13.13□□□□□ -0.31
CHMP2A-203ENST00000597209 CA1P00915 261 aaPredicted RBP13.12□□□□□ -0.31
CHMP2A-203ENST00000597209 PSG1P11464 419 aa13.12□□□□□ -0.31
CHMP2A-203ENST00000597209 VAMP1P23763 118 aa13.12□□□□□ -0.31
CHMP2A-203ENST00000597209 PMS2P11Q13670 270 aa13.12□□□□□ -0.31
CHMP2A-203ENST00000597209 TMEM41BQ5BJD5 291 aa13.12□□□□□ -0.31
CHMP2A-203ENST00000597209 SPANXN2Q5MJ10 180 aa13.12□□□□□ -0.31
CHMP2A-203ENST00000597209 CEMP1Q6PRD7 247 aaPredicted RBP13.12□□□□□ -0.31
CHMP2A-203ENST00000597209 SRRQ9GZT4 340 aa13.12□□□□□ -0.31
CHMP2A-203ENST00000597209 C11orf68Q9H3H3 251 aaKnown RBP13.12□□□□□ -0.31
CHMP2A-203ENST00000597209 BUB3O43684 328 aa13.11□□□□□ -0.31
CHMP2A-203ENST00000597209 MED6O75586 246 aa13.11□□□□□ -0.31
CHMP2A-203ENST00000597209 NUP62P37198 522 aaPredicted RBP13.11□□□□□ -0.31
CHMP2A-203ENST00000597209 UBE2MP61081 183 aaKnown RBP13.11□□□□□ -0.31
CHMP2A-203ENST00000597209 DHRS2Q13268 280 aa13.11□□□□□ -0.31
CHMP2A-203ENST00000597209 PPP1R1AQ13522 171 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms