RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 ALKAL2Q6UX46 152 aa11.39□□□□□ -0.59
VRK3-212ENST00000596814 TXN2Q99757 166 aa11.39□□□□□ -0.59
VRK3-212ENST00000596814 KCNIP2Q9NS61 270 aa11.39□□□□□ -0.59
VRK3-212ENST00000596814 RFNGQ9Y644 331 aa11.39□□□□□ -0.59
VRK3-212ENST00000596814 IGKV1D-37A0A075B6S9 117 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 TRBV7-1A0A0A6YYK4 115 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 TCRBV4S1A1TA0A5B7 111 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 F8W735 103 aaPredicted RBP11.38□□□□□ -0.59
VRK3-212ENST00000596814 IFNA7P01567 189 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 CYP2G1PQ6ZSU1 146 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 RNF152Q8N8N0 203 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 ZNF680Q8NEM1 530 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 OR2G3Q8NGZ4 309 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 CCDC140Q96MF4 163 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 TRGV9Q99603 122 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 C2CD3Q4AC94 2353 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 TRAV30A0A087WSZ9 112 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 OR2T8A6NH00 312 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 SCGB2A1O75556 95 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 RPLP1P05386 114 aaKnown RBP11.38□□□□□ -0.59
VRK3-212ENST00000596814 GPR183P32249 361 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 OR5AU1Q8NGC0 362 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 OR4X2Q8NGF9 303 aa11.38□□□□□ -0.59
VRK3-212ENST00000596814 GAR1Q9NY12 217 aaKnown RBP11.38□□□□□ -0.59
VRK3-212ENST00000596814 ZNF90Q03938 601 aa11.37□□□□□ -0.59
VRK3-212ENST00000596814 MIC13Q5XKP0 118 aa11.37□□□□□ -0.59
VRK3-212ENST00000596814 TMEM182Q6ZP80 229 aaPredicted RBP11.37□□□□□ -0.59
VRK3-212ENST00000596814 MYOZ3Q8TDC0 251 aa11.37□□□□□ -0.59
VRK3-212ENST00000596814 ATP6V0BQ99437 205 aa11.37□□□□□ -0.59
VRK3-212ENST00000596814 UBQLN2Q9UHD9 624 aa11.37□□□□□ -0.59
VRK3-212ENST00000596814 SLC45A2Q9UMX9 530 aa11.37□□□□□ -0.59
VRK3-212ENST00000596814 PXMP4Q9Y6I8 212 aa11.37□□□□□ -0.59
VRK3-212ENST00000596814 IGKV1-17P01599 117 aa11.36□□□□□ -0.59
VRK3-212ENST00000596814 IGHV3-11P01762 117 aa11.36□□□□□ -0.59
VRK3-212ENST00000596814 RPL29P47914 159 aaKnown RBP11.36□□□□□ -0.59
VRK3-212ENST00000596814 ELLP55199 621 aaPredicted RBP11.36□□□□□ -0.59
VRK3-212ENST00000596814 B2MP61769 119 aa11.36□□□□□ -0.59
VRK3-212ENST00000596814 SELENOTP62341 195 aa11.36□□□□□ -0.59
VRK3-212ENST00000596814 SERF2P84101 59 aa11.36□□□□□ -0.59
VRK3-212ENST00000596814 TIGITQ495A1 244 aa11.36□□□□□ -0.59
VRK3-212ENST00000596814 FFAR4Q5NUL3 377 aa11.36□□□□□ -0.59
VRK3-212ENST00000596814 FAM74A1Q5RGS3 127 aa11.36□□□□□ -0.59
VRK3-212ENST00000596814 CLEC19AQ6UXS0 136 aa11.36□□□□□ -0.59
VRK3-212ENST00000596814 ZNF767PQ75MW2 155 aa11.36□□□□□ -0.59
VRK3-212ENST00000596814 STPG3Q8N7X2 389 aa11.36□□□□□ -0.59
VRK3-212ENST00000596814 BPIFCQ8NFQ6 507 aa11.36□□□□□ -0.59
VRK3-212ENST00000596814 WIPF2Q8TF74 440 aaPredicted RBP11.36□□□□□ -0.59
VRK3-212ENST00000596814 RNF114Q9Y508 228 aa11.36□□□□□ -0.59
VRK3-212ENST00000596814 CLPSL1A2RUU4 121 aa11.35□□□□□ -0.59
VRK3-212ENST00000596814 NUPL2O15504 423 aaKnown RBP11.35□□□□□ -0.59
VRK3-212ENST00000596814 TSPAN15O95858 294 aa11.35□□□□□ -0.59
VRK3-212ENST00000596814 FABP1P07148 127 aa11.35□□□□□ -0.59
VRK3-212ENST00000596814 KIAA0141Q14154 515 aaPredicted RBP11.35□□□□□ -0.59
VRK3-212ENST00000596814 ZNF491Q8N8L2 437 aa11.35□□□□□ -0.59
VRK3-212ENST00000596814 JMJD1CQ15652 2540 aa11.35□□□□□ -0.59
VRK3-212ENST00000596814 TGOLN2O43493 480 aa11.35□□□□□ -0.59
VRK3-212ENST00000596814 CLEC3BP05452 202 aa11.35□□□□□ -0.59
VRK3-212ENST00000596814 GATA2P23769 480 aaPredicted RBP11.35□□□□□ -0.59
VRK3-212ENST00000596814 PRR20EP86478 221 aa11.35□□□□□ -0.59
VRK3-212ENST00000596814 PRR20CP86479 221 aa11.35□□□□□ -0.59
VRK3-212ENST00000596814 PRR20DP86480 221 aa11.35□□□□□ -0.59
VRK3-212ENST00000596814 PRR20BP86481 221 aa11.35□□□□□ -0.59
VRK3-212ENST00000596814 PRR20AP86496 221 aa11.35□□□□□ -0.59
VRK3-212ENST00000596814 ZNF616Q08AN1 781 aa11.35□□□□□ -0.59
VRK3-212ENST00000596814 AKR1C8PQ5T2L2 129 aa11.35□□□□□ -0.59
VRK3-212ENST00000596814 ZNF343Q6P1L6 599 aa11.35□□□□□ -0.59
VRK3-212ENST00000596814 SLC39A9Q9NUM3 307 aa11.35□□□□□ -0.59
VRK3-212ENST00000596814 NIPBLQ6KC79 2804 aaeCLIP11.35□□□□□ -0.59
VRK3-212ENST00000596814 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.34□□□□□ -0.59
VRK3-212ENST00000596814 UMAD1C9J7I0 102 aa11.34□□□□□ -0.59
VRK3-212ENST00000596814 HAX1O00165 279 aa11.34□□□□□ -0.59
VRK3-212ENST00000596814 RGS13O14921 159 aa11.34□□□□□ -0.59
VRK3-212ENST00000596814 TOMM40O96008 361 aa11.34□□□□□ -0.59
VRK3-212ENST00000596814 CTSGP08311 255 aa11.34□□□□□ -0.59
VRK3-212ENST00000596814 LINC00869P0C866 280 aa11.34□□□□□ -0.59
VRK3-212ENST00000596814 SULT1A2P50226 295 aa11.34□□□□□ -0.59
VRK3-212ENST00000596814 PROK1P58294 105 aa11.34□□□□□ -0.59
VRK3-212ENST00000596814 YPEL3P61236 119 aaPredicted RBP11.34□□□□□ -0.59
VRK3-212ENST00000596814 FAM209BQ5JX69 171 aa11.34□□□□□ -0.59
VRK3-212ENST00000596814 UBE2E2Q96LR5 201 aa11.34□□□□□ -0.59
VRK3-212ENST00000596814 CHRDL1Q9BU40 450 aa11.34□□□□□ -0.59
VRK3-212ENST00000596814 GNB4Q9HAV0 340 aa11.34□□□□□ -0.59
VRK3-212ENST00000596814 PLA2G2EQ9NZK7 142 aa11.34□□□□□ -0.59
VRK3-212ENST00000596814 PPP5D1E7EU14 171 aa11.33□□□□□ -0.6
VRK3-212ENST00000596814 MBP02144 154 aa11.33□□□□□ -0.6
VRK3-212ENST00000596814 RD3LP0DJH9 198 aa11.33□□□□□ -0.6
VRK3-212ENST00000596814 PSG1P11464 419 aa11.33□□□□□ -0.6
VRK3-212ENST00000596814 ADMP35318 185 aa11.33□□□□□ -0.6
VRK3-212ENST00000596814 TCTEX1D4Q5JR98 221 aa11.33□□□□□ -0.6
VRK3-212ENST00000596814 KHDC1LQ5JSQ8 128 aa11.33□□□□□ -0.6
VRK3-212ENST00000596814 SPSB3Q6PJ21 355 aa11.33□□□□□ -0.6
VRK3-212ENST00000596814 Q6ZRG5 221 aa11.33□□□□□ -0.6
VRK3-212ENST00000596814 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.33□□□□□ -0.6
VRK3-212ENST00000596814 OR5B12Q96R08 314 aa11.33□□□□□ -0.6
VRK3-212ENST00000596814 A0A1B0GUS0 222 aa11.32□□□□□ -0.6
VRK3-212ENST00000596814 ANKRD34BA5PLL1 514 aa11.32□□□□□ -0.6
VRK3-212ENST00000596814 YIF1AO95070 293 aa11.32□□□□□ -0.6
VRK3-212ENST00000596814 TRBV12-3P01733 135 aa11.32□□□□□ -0.6
VRK3-212ENST00000596814 LGALS1P09382 135 aaKnown RBP11.32□□□□□ -0.6
VRK3-212ENST00000596814 ARL3P36405 182 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms