RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 CD69Q07108 199 aa8.38□□□□□ -1.07
LIG1-211ENST00000596457 TOMM20LQ6UXN7 152 aa8.38□□□□□ -1.07
LIG1-211ENST00000596457 GSG1LQ6UXU4 331 aa8.38□□□□□ -1.07
LIG1-211ENST00000596457 SLC16A13Q7RTY0 426 aa8.38□□□□□ -1.07
LIG1-211ENST00000596457 OR2K2Q8NGT1 345 aa8.38□□□□□ -1.07
LIG1-211ENST00000596457 WDR89Q96FK6 387 aaPredicted RBP8.38□□□□□ -1.07
LIG1-211ENST00000596457 SLC35E1Q96K37 410 aa8.38□□□□□ -1.07
LIG1-211ENST00000596457 DAZ1Q9NQZ3 744 aaKnown RBP8.38□□□□□ -1.07
LIG1-211ENST00000596457 TECRQ9NZ01 308 aaKnown RBP8.38□□□□□ -1.07
LIG1-211ENST00000596457 RCL1Q9Y2P8 373 aaKnown RBP8.38□□□□□ -1.07
LIG1-211ENST00000596457 STRAPQ9Y3F4 350 aaKnown RBP8.38□□□□□ -1.07
LIG1-211ENST00000596457 LSM5Q9Y4Y9 91 aaKnown RBP8.38□□□□□ -1.07
LIG1-211ENST00000596457 PUS1Q9Y606 427 aaKnown RBP eCLIP8.38□□□□□ -1.07
LIG1-211ENST00000596457 EPPK1P58107 5090 aaKnown RBP8.37□□□□□ -1.07
LIG1-211ENST00000596457 TRAV14DV4A0A0A6YYC5 116 aa8.37□□□□□ -1.07
LIG1-211ENST00000596457 ATP5IP56385 69 aaPredicted RBP8.37□□□□□ -1.07
LIG1-211ENST00000596457 RBPMS2Q6ZRY4 209 aaKnown RBP8.37□□□□□ -1.07
LIG1-211ENST00000596457 TMEM116Q8NCL8 245 aa8.37□□□□□ -1.07
LIG1-211ENST00000596457 OR1S2Q8NGQ3 325 aa8.37□□□□□ -1.07
LIG1-211ENST00000596457 MARC2Q969Z3 335 aa8.37□□□□□ -1.07
LIG1-211ENST00000596457 LSM4Q9Y4Z0 139 aaKnown RBP8.37□□□□□ -1.07
LIG1-211ENST00000596457 SMAD5-AS1Q9Y6J3 95 aa8.37□□□□□ -1.07
LIG1-211ENST00000596457 IGKV3-7A0A075B6H7 116 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 IGHV3-66A0A0C4DH42 116 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 IGHV7-4-1A0A0J9YVY3 117 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 ZNF785A8K8V0 405 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 K7EMT4 169 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 L7N2F9 121 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 GOSR2O14653 212 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 SIX6O95475 246 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 MBPP02686 304 aaPredicted RBP8.36□□□□□ -1.07
LIG1-211ENST00000596457 C8orf88P0DMB2 117 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 GPX4P36969 197 aaPredicted RBP8.36□□□□□ -1.07
LIG1-211ENST00000596457 CD81P60033 236 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 VAMP2P63027 116 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 OR8G2PQ6IF36 304 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 GTSCR1Q86UQ5 136 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 TMEM61Q8N0U2 210 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 Q8WTZ3 238 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 ZNF414Q96IQ9 312 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 C2orf50Q96LR7 162 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 ASCL2Q99929 193 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 GINS3Q9BRX5 216 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 SMPXQ9UHP9 88 aa8.36□□□□□ -1.07
LIG1-211ENST00000596457 SMCO3A2RU48 225 aa8.35□□□□□ -1.07
LIG1-211ENST00000596457 ZFP92A6NM28 416 aa8.35□□□□□ -1.07
LIG1-211ENST00000596457 PRAF2O60831 178 aa8.35□□□□□ -1.07
LIG1-211ENST00000596457 IGKV1-17P01599 117 aa8.35□□□□□ -1.07
LIG1-211ENST00000596457 APOHP02749 345 aaPredicted RBP8.35□□□□□ -1.07
LIG1-211ENST00000596457 IGLC1P0CG04 106 aa8.35□□□□□ -1.07
LIG1-211ENST00000596457 BCAP31P51572 246 aa8.35□□□□□ -1.07
LIG1-211ENST00000596457 S100A10P60903 97 aa8.35□□□□□ -1.07
LIG1-211ENST00000596457 GAMTQ14353 236 aa8.35□□□□□ -1.07
LIG1-211ENST00000596457 LAMTOR1Q6IAA8 161 aa8.35□□□□□ -1.07
LIG1-211ENST00000596457 SMIM8Q96KF7 97 aa8.35□□□□□ -1.07
LIG1-211ENST00000596457 NEURL2Q9BR09 285 aa8.35□□□□□ -1.07
LIG1-211ENST00000596457 RHPN1-AS1Q9BWJ2 59 aa8.35□□□□□ -1.07
LIG1-211ENST00000596457 ZFAND3Q9H8U3 227 aa8.35□□□□□ -1.07
LIG1-211ENST00000596457 SNRPGP15A8MWD9 76 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 K7EPK0 472 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 CHEK1O14757 476 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 SSNA1O43805 119 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 CCNKO75909 580 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 CD7P09564 240 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 METTL15P1P0C7V9 234 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 RD3LP0DJH9 198 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 NPPCP23582 126 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 TFPI2P48307 235 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 PAX9P55771 341 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 RRAS2P62070 204 aaPredicted RBP8.34□□□□□ -1.07
LIG1-211ENST00000596457 RPL11P62913 178 aaKnown RBP8.34□□□□□ -1.07
LIG1-211ENST00000596457 AKR1C1Q04828 323 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 OR2F1Q13607 317 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 Q8N1Y9 231 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 ST8SIA2Q92186 375 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 METTL26Q96S19 204 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 RAB40CQ96S21 281 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 RNF2Q99496 336 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 MARVELD1Q9BSK0 173 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 TUBA4BQ9H853 241 aa8.34□□□□□ -1.07
LIG1-211ENST00000596457 C7orf66A4D0T2 115 aa8.33□□□□□ -1.08
LIG1-211ENST00000596457 TOMM40O96008 361 aa8.33□□□□□ -1.08
LIG1-211ENST00000596457 IL4P05112 153 aa8.33□□□□□ -1.08
LIG1-211ENST00000596457 IGHV4-30-4P0DP06 118 aa8.33□□□□□ -1.08
LIG1-211ENST00000596457 YPEL3P61236 119 aaPredicted RBP8.33□□□□□ -1.08
LIG1-211ENST00000596457 ZNF90Q03938 601 aa8.33□□□□□ -1.08
LIG1-211ENST00000596457 RAB32Q13637 225 aa8.33□□□□□ -1.08
LIG1-211ENST00000596457 WFDC3Q8IUB2 231 aa8.33□□□□□ -1.08
LIG1-211ENST00000596457 GBGT1Q8N5D6 347 aa8.33□□□□□ -1.08
LIG1-211ENST00000596457 OR51G1Q8NGK1 321 aa8.33□□□□□ -1.08
LIG1-211ENST00000596457 NARS2Q96I59 477 aaKnown RBP8.33□□□□□ -1.08
LIG1-211ENST00000596457 B9D2Q9BPU9 175 aa8.33□□□□□ -1.08
LIG1-211ENST00000596457 PBDC1Q9BVG4 233 aa8.33□□□□□ -1.08
LIG1-211ENST00000596457 UBQLN2Q9UHD9 624 aa8.33□□□□□ -1.08
LIG1-211ENST00000596457 DNAH3Q8TD57 4116 aa8.32□□□□□ -1.08
LIG1-211ENST00000596457 TRAV25A0A0B4J276 109 aa8.32□□□□□ -1.08
LIG1-211ENST00000596457 FAM24AA6NFZ4 105 aa8.32□□□□□ -1.08
LIG1-211ENST00000596457 HNRNPCP07910 306 aaKnown RBP eCLIP8.32□□□□□ -1.08
LIG1-211ENST00000596457 FRMD6-AS1P0C7T7 363 aa8.32□□□□□ -1.08
LIG1-211ENST00000596457 NHLRC4P0CG21 123 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms