RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 MLXQ9UH92 298 aa11.95□□□□□ -0.5
USHBP1-206ENST00000596436 UFC1Q9Y3C8 167 aa11.95□□□□□ -0.5
USHBP1-206ENST00000596436 RPS10-NUDT3A0A1W2PQS6 291 aa11.94□□□□□ -0.5
USHBP1-206ENST00000596436 WRBO00258 174 aa11.94□□□□□ -0.5
USHBP1-206ENST00000596436 ZNF207O43670 478 aaKnown RBP11.94□□□□□ -0.5
USHBP1-206ENST00000596436 CLN5O75503 358 aa11.94□□□□□ -0.5
USHBP1-206ENST00000596436 MED6O75586 246 aa11.94□□□□□ -0.5
USHBP1-206ENST00000596436 C8orf88P0DMB2 117 aa11.94□□□□□ -0.5
USHBP1-206ENST00000596436 RND2P52198 227 aa11.94□□□□□ -0.5
USHBP1-206ENST00000596436 ELLP55199 621 aaPredicted RBP11.94□□□□□ -0.5
USHBP1-206ENST00000596436 POLR2GP62487 172 aaKnown RBP eCLIP11.94□□□□□ -0.5
USHBP1-206ENST00000596436 RELQ04864 619 aaPredicted RBP11.94□□□□□ -0.5
USHBP1-206ENST00000596436 IAH1Q2TAA2 248 aaPredicted RBP11.94□□□□□ -0.5
USHBP1-206ENST00000596436 BTNL8Q6UX41 500 aa11.94□□□□□ -0.5
USHBP1-206ENST00000596436 C12orf45Q8N5I9 185 aaPredicted RBP11.94□□□□□ -0.5
USHBP1-206ENST00000596436 ZBTB8BQ8NAP8 495 aaPredicted RBP11.94□□□□□ -0.5
USHBP1-206ENST00000596436 DYNLRB2Q8TF09 96 aa11.94□□□□□ -0.5
USHBP1-206ENST00000596436 TUBA4BQ9H853 241 aa11.94□□□□□ -0.5
USHBP1-206ENST00000596436 RETNQ9HD89 108 aa11.94□□□□□ -0.5
USHBP1-206ENST00000596436 FRAS1Q86XX4 4008 aa11.93□□□□□ -0.5
USHBP1-206ENST00000596436 IGKV1-17P01599 117 aa11.93□□□□□ -0.5
USHBP1-206ENST00000596436 IL5P05113 134 aa11.93□□□□□ -0.5
USHBP1-206ENST00000596436 NKX2-1P43699 371 aaPredicted RBP11.93□□□□□ -0.5
USHBP1-206ENST00000596436 DEFA1P59665 94 aa11.93□□□□□ -0.5
USHBP1-206ENST00000596436 DEFA3P59666 94 aa11.93□□□□□ -0.5
USHBP1-206ENST00000596436 SLC16A13Q7RTY0 426 aa11.93□□□□□ -0.5
USHBP1-206ENST00000596436 NOXA1Q86UR1 476 aa11.93□□□□□ -0.5
USHBP1-206ENST00000596436 ZFAND3Q9H8U3 227 aa11.93□□□□□ -0.5
USHBP1-206ENST00000596436 DAZ1Q9NQZ3 744 aaKnown RBP11.93□□□□□ -0.5
USHBP1-206ENST00000596436 ZNF785A8K8V0 405 aa11.92□□□□□ -0.5
USHBP1-206ENST00000596436 H3BP45 60 aa11.92□□□□□ -0.5
USHBP1-206ENST00000596436 SCGB1D2O95969 90 aa11.92□□□□□ -0.5
USHBP1-206ENST00000596436 IFNA4P05014 189 aa11.92□□□□□ -0.5
USHBP1-206ENST00000596436 IGLC1P0CG04 106 aa11.92□□□□□ -0.5
USHBP1-206ENST00000596436 SLC25A4P12235 298 aa11.92□□□□□ -0.5
USHBP1-206ENST00000596436 TIGITQ495A1 244 aa11.92□□□□□ -0.5
USHBP1-206ENST00000596436 TOMM20LQ6UXN7 152 aa11.92□□□□□ -0.5
USHBP1-206ENST00000596436 ZNF600Q6ZNG1 722 aa11.92□□□□□ -0.5
USHBP1-206ENST00000596436 TMEM61Q8N0U2 210 aa11.92□□□□□ -0.5
USHBP1-206ENST00000596436 TMEM116Q8NCL8 245 aa11.92□□□□□ -0.5
USHBP1-206ENST00000596436 MARC2Q969Z3 335 aa11.92□□□□□ -0.5
USHBP1-206ENST00000596436 WDR89Q96FK6 387 aaPredicted RBP11.92□□□□□ -0.5
USHBP1-206ENST00000596436 CIB3Q96Q77 187 aaPredicted RBP11.92□□□□□ -0.5
USHBP1-206ENST00000596436 TECRQ9NZ01 308 aaKnown RBP11.92□□□□□ -0.5
USHBP1-206ENST00000596436 MRPL27Q9P0M9 148 aaKnown RBP11.92□□□□□ -0.5
USHBP1-206ENST00000596436 PRSS46E5RG02 174 aa11.91□□□□□ -0.5
USHBP1-206ENST00000596436 INMT-MINDY4F8WBC2 141 aa11.91□□□□□ -0.5
USHBP1-206ENST00000596436 K7EMT4 169 aa11.91□□□□□ -0.5
USHBP1-206ENST00000596436 SSSCA1O60232 199 aa11.91□□□□□ -0.5
USHBP1-206ENST00000596436 YIF1AO95070 293 aa11.91□□□□□ -0.5
USHBP1-206ENST00000596436 ATP5IP56385 69 aaPredicted RBP11.91□□□□□ -0.5
USHBP1-206ENST00000596436 NPIPB3Q92617 1050 aa11.91□□□□□ -0.5
USHBP1-206ENST00000596436 ACY3Q96HD9 319 aa11.91□□□□□ -0.5
USHBP1-206ENST00000596436 MARVELD1Q9BSK0 173 aa11.91□□□□□ -0.5
USHBP1-206ENST00000596436 GSKIPQ9P0R6 139 aa11.91□□□□□ -0.5
USHBP1-206ENST00000596436 PAIP2BQ9ULR5 123 aaKnown RBP11.91□□□□□ -0.5
USHBP1-206ENST00000596436 RCL1Q9Y2P8 373 aaKnown RBP11.91□□□□□ -0.5
USHBP1-206ENST00000596436 PUS1Q9Y606 427 aaKnown RBP eCLIP11.91□□□□□ -0.5
USHBP1-206ENST00000596436 IGHV3-49A0A0A0MS15 119 aa11.9□□□□□ -0.5
USHBP1-206ENST00000596436 RBMY1BA6NDE4 496 aaKnown RBP11.9□□□□□ -0.5
USHBP1-206ENST00000596436 RBMY1EA6NEQ0 496 aaKnown RBP11.9□□□□□ -0.5
USHBP1-206ENST00000596436 FAM25EA8MYX2 175 aa11.9□□□□□ -0.5
USHBP1-206ENST00000596436 MBPP02686 304 aaPredicted RBP11.9□□□□□ -0.5
USHBP1-206ENST00000596436 RBMY1DP0C7P1 496 aaKnown RBP11.9□□□□□ -0.5
USHBP1-206ENST00000596436 OR10J1P30954 320 aa11.9□□□□□ -0.5
USHBP1-206ENST00000596436 PAX9P55771 341 aa11.9□□□□□ -0.5
USHBP1-206ENST00000596436 GAMTQ14353 236 aa11.9□□□□□ -0.5
USHBP1-206ENST00000596436 SPANXN5Q5MJ07 72 aa11.9□□□□□ -0.5
USHBP1-206ENST00000596436 ETFRF1Q6IPR1 90 aa11.9□□□□□ -0.5
USHBP1-206ENST00000596436 FAM110AQ9BQ89 295 aa11.9□□□□□ -0.5
USHBP1-206ENST00000596436 NEURL2Q9BR09 285 aa11.9□□□□□ -0.5
USHBP1-206ENST00000596436 TRAV30A0A087WSZ9 112 aa11.89□□□□□ -0.51
USHBP1-206ENST00000596436 IGHV7-4-1A0A0J9YVY3 117 aa11.89□□□□□ -0.51
USHBP1-206ENST00000596436 SCAF4O95104 1147 aaKnown RBP11.89□□□□□ -0.51
USHBP1-206ENST00000596436 CD7P09564 240 aa11.89□□□□□ -0.51
USHBP1-206ENST00000596436 CD81P60033 236 aa11.89□□□□□ -0.51
USHBP1-206ENST00000596436 RAB11AP62491 216 aa11.89□□□□□ -0.51
USHBP1-206ENST00000596436 OR1S2Q8NGQ3 325 aa11.89□□□□□ -0.51
USHBP1-206ENST00000596436 PSENENQ9NZ42 101 aa11.89□□□□□ -0.51
USHBP1-206ENST00000596436 SMPXQ9UHP9 88 aa11.89□□□□□ -0.51
USHBP1-206ENST00000596436 IGKV1D-37A0A075B6S9 117 aa11.88□□□□□ -0.51
USHBP1-206ENST00000596436 IGHV3OR16-13A0A075B7E8 117 aa11.88□□□□□ -0.51
USHBP1-206ENST00000596436 IGHV3-74A0A0B4J1X5 117 aa11.88□□□□□ -0.51
USHBP1-206ENST00000596436 C5orf51A6NDU8 294 aa11.88□□□□□ -0.51
USHBP1-206ENST00000596436 CHEK1O14757 476 aa11.88□□□□□ -0.51
USHBP1-206ENST00000596436 PRAF2O60831 178 aa11.88□□□□□ -0.51
USHBP1-206ENST00000596436 CCNKO75909 580 aa11.88□□□□□ -0.51
USHBP1-206ENST00000596436 APOHP02749 345 aaPredicted RBP11.88□□□□□ -0.51
USHBP1-206ENST00000596436 GPX4P36969 197 aaPredicted RBP11.88□□□□□ -0.51
USHBP1-206ENST00000596436 GUCA2BQ16661 112 aa11.88□□□□□ -0.51
USHBP1-206ENST00000596436 SLC35E1Q96K37 410 aa11.88□□□□□ -0.51
USHBP1-206ENST00000596436 SMIM8Q96KF7 97 aa11.88□□□□□ -0.51
USHBP1-206ENST00000596436 C2orf50Q96LR7 162 aa11.88□□□□□ -0.51
USHBP1-206ENST00000596436 GPN1Q9HCN4 374 aaPredicted RBP11.88□□□□□ -0.51
USHBP1-206ENST00000596436 STRAPQ9Y3F4 350 aaKnown RBP11.88□□□□□ -0.51
USHBP1-206ENST00000596436 TRAV14DV4A0A0A6YYC5 116 aa11.87□□□□□ -0.51
USHBP1-206ENST00000596436 PMS2P5A8MQ11 134 aa11.87□□□□□ -0.51
USHBP1-206ENST00000596436 SNRPGP15A8MWD9 76 aa11.87□□□□□ -0.51
USHBP1-206ENST00000596436 YPEL3P61236 119 aaPredicted RBP11.87□□□□□ -0.51
USHBP1-206ENST00000596436 RPP30P78346 268 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms