RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 MED28Q9H204 178 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 ZFAND3Q9H8U3 227 aa8.03□□□□□ -1.12
LIG1-210ENST00000596332 LYRM2Q9NU23 88 aaPredicted RBP8.03□□□□□ -1.12
LIG1-210ENST00000596332 STRAPQ9Y3F4 350 aaKnown RBP8.03□□□□□ -1.12
LIG1-210ENST00000596332 A8MWP6 167 aa8.02□□□□□ -1.13
LIG1-210ENST00000596332 IFNA4P05014 189 aa8.02□□□□□ -1.13
LIG1-210ENST00000596332 C8orf88P0DMB2 117 aa8.02□□□□□ -1.13
LIG1-210ENST00000596332 SLC25A4P12235 298 aa8.02□□□□□ -1.13
LIG1-210ENST00000596332 CYCSP99999 105 aaKnown RBP8.02□□□□□ -1.13
LIG1-210ENST00000596332 BEAN1Q3B7T3 259 aa8.02□□□□□ -1.13
LIG1-210ENST00000596332 TIGITQ495A1 244 aa8.02□□□□□ -1.13
LIG1-210ENST00000596332 TM4SF20Q53R12 229 aa8.02□□□□□ -1.13
LIG1-210ENST00000596332 Q56UQ5 140 aa8.02□□□□□ -1.13
LIG1-210ENST00000596332 SPSB3Q6PJ21 355 aa8.02□□□□□ -1.13
LIG1-210ENST00000596332 AKAP14Q86UN6 197 aa8.02□□□□□ -1.13
LIG1-210ENST00000596332 NOXA1Q86UR1 476 aa8.02□□□□□ -1.13
LIG1-210ENST00000596332 C1QL4Q86Z23 238 aa8.02□□□□□ -1.13
LIG1-210ENST00000596332 THAP8Q8NA92 274 aa8.02□□□□□ -1.13
LIG1-210ENST00000596332 UBAC2Q8NBM4 344 aa8.02□□□□□ -1.13
LIG1-210ENST00000596332 NDUFA4O00483 81 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 CD33P20138 364 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 NPBWR1P48145 328 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 S100A10P60903 97 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 RAB11AP62491 216 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 NHLH2Q02577 135 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 ZNF90Q03938 601 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 EGFEM1PQ0D2K5 195 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 RPEL1Q2QD12 228 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 VWC2Q2TAL6 325 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 LRRC37A5PQ49AS3 106 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 TOMM20LQ6UXN7 152 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 LILRB2Q8N423 598 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 STPG3Q8N7X2 389 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 OR9G4Q8NGQ1 327 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 TMEM190Q8WZ59 177 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 SIGLEC8Q9NYZ4 499 aa8.01□□□□□ -1.13
LIG1-210ENST00000596332 LSM4Q9Y4Z0 139 aaKnown RBP8.01□□□□□ -1.13
LIG1-210ENST00000596332 IGHV3OR16-8A0A075B7F1 116 aa8□□□□□ -1.13
LIG1-210ENST00000596332 RPS10-NUDT3A0A1W2PQS6 291 aa8□□□□□ -1.13
LIG1-210ENST00000596332 C2orf70A6NJV1 201 aa8□□□□□ -1.13
LIG1-210ENST00000596332 GNG7O60262 68 aa8□□□□□ -1.13
LIG1-210ENST00000596332 CST7O76096 145 aa8□□□□□ -1.13
LIG1-210ENST00000596332 SCAF4O95104 1147 aaKnown RBP8□□□□□ -1.13
LIG1-210ENST00000596332 IGLV1-51P01701 117 aa8□□□□□ -1.13
LIG1-210ENST00000596332 APOHP02749 345 aaPredicted RBP8□□□□□ -1.13
LIG1-210ENST00000596332 GIPP09681 153 aaPredicted RBP8□□□□□ -1.13
LIG1-210ENST00000596332 P2RY1P47900 373 aa8□□□□□ -1.13
LIG1-210ENST00000596332 YPEL3P61236 119 aaPredicted RBP8□□□□□ -1.13
LIG1-210ENST00000596332 RPP30P78346 268 aaKnown RBP8□□□□□ -1.13
LIG1-210ENST00000596332 DLK1P80370 383 aa8□□□□□ -1.13
LIG1-210ENST00000596332 OR8G2PQ6IF36 304 aa8□□□□□ -1.13
LIG1-210ENST00000596332 ETFRF1Q6IPR1 90 aa8□□□□□ -1.13
LIG1-210ENST00000596332 ACOT7LQ6ZUV0 252 aa8□□□□□ -1.13
LIG1-210ENST00000596332 ACY3Q96HD9 319 aa8□□□□□ -1.13
LIG1-210ENST00000596332 U3KQE9 123 aa8□□□□□ -1.13
LIG1-210ENST00000596332 WI2-2373I1.2A0A1W2PRP0 233 aa7.99□□□□□ -1.13
LIG1-210ENST00000596332 IZUMO1RA6ND01 250 aa7.99□□□□□ -1.13
LIG1-210ENST00000596332 SEC14L6B5MCN3 397 aa7.99□□□□□ -1.13
LIG1-210ENST00000596332 E5RGE8 158 aa7.99□□□□□ -1.13
LIG1-210ENST00000596332 FNDC10F2Z333 226 aa7.99□□□□□ -1.13
LIG1-210ENST00000596332 K7EMT4 169 aa7.99□□□□□ -1.13
LIG1-210ENST00000596332 NUPL2O15504 423 aaKnown RBP7.99□□□□□ -1.13
LIG1-210ENST00000596332 PSG1P11464 419 aa7.99□□□□□ -1.13
LIG1-210ENST00000596332 S100A1P23297 94 aa7.99□□□□□ -1.13
LIG1-210ENST00000596332 CBLN1P23435 193 aa7.99□□□□□ -1.13
LIG1-210ENST00000596332 OR10J1P30954 320 aa7.99□□□□□ -1.13
LIG1-210ENST00000596332 SULT1A1P50225 295 aa7.99□□□□□ -1.13
LIG1-210ENST00000596332 TMEM144Q7Z5S9 345 aa7.99□□□□□ -1.13
LIG1-210ENST00000596332 OR1S2Q8NGQ3 325 aa7.99□□□□□ -1.13
LIG1-210ENST00000596332 GAR1Q9NY12 217 aaKnown RBP7.99□□□□□ -1.13
LIG1-210ENST00000596332 MBD2Q9UBB5 411 aa7.99□□□□□ -1.13
LIG1-210ENST00000596332 MLXQ9UH92 298 aa7.99□□□□□ -1.13
LIG1-210ENST00000596332 PUS1Q9Y606 427 aaKnown RBP eCLIP7.99□□□□□ -1.13
LIG1-210ENST00000596332 TRAV30A0A087WSZ9 112 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 ZNF785A8K8V0 405 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 L7N2F9 121 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 TOMM40O96008 361 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 FOLR2P14207 255 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 GATA2P23769 480 aaPredicted RBP7.98□□□□□ -1.13
LIG1-210ENST00000596332 CAV2P51636 162 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 ELLP55199 621 aaPredicted RBP7.98□□□□□ -1.13
LIG1-210ENST00000596332 RAP2BP61225 183 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 VAMP2P63027 116 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 EWSR1Q01844 656 aaKnown RBP eCLIP7.98□□□□□ -1.13
LIG1-210ENST00000596332 USF2Q15853 346 aaPredicted RBP7.98□□□□□ -1.13
LIG1-210ENST00000596332 DEFB114Q30KQ6 69 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 FAM106AQ4KMX7 169 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 ZNF600Q6ZNG1 722 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 OR11H4Q8NGC9 324 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 OR10P1Q8NGE3 313 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 ST6GAL2Q96JF0 529 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 TRGV9Q99603 122 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 GGACTQ9BVM4 153 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 WFDC1Q9HC57 220 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 SELENOKQ9Y6D0 94 aa7.98□□□□□ -1.13
LIG1-210ENST00000596332 ZNF320A2RRD8 509 aa7.97□□□□□ -1.13
LIG1-210ENST00000596332 RNF222A6NCQ9 220 aa7.97□□□□□ -1.13
LIG1-210ENST00000596332 SMLR1H3BR10 107 aa7.97□□□□□ -1.13
LIG1-210ENST00000596332 ZNF207O43670 478 aaKnown RBP7.97□□□□□ -1.13
LIG1-210ENST00000596332 LINC00869P0C866 280 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms