RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 OR4D5Q8NGN0 318 aa13.03□□□□□ -0.32
SHKBP1-212ENST00000596163 Q8WTZ3 238 aa13.03□□□□□ -0.32
SHKBP1-212ENST00000596163 ACY3Q96HD9 319 aa13.03□□□□□ -0.32
SHKBP1-212ENST00000596163 GPN1Q9HCN4 374 aaPredicted RBP13.03□□□□□ -0.32
SHKBP1-212ENST00000596163 MRPL36Q9P0J6 103 aaKnown RBP13.03□□□□□ -0.32
SHKBP1-212ENST00000596163 CD5P06127 495 aa13.02□□□□□ -0.33
SHKBP1-212ENST00000596163 CD81P60033 236 aa13.02□□□□□ -0.33
SHKBP1-212ENST00000596163 YPEL3P61236 119 aaPredicted RBP13.02□□□□□ -0.33
SHKBP1-212ENST00000596163 IFITM3Q01628 133 aa13.02□□□□□ -0.33
SHKBP1-212ENST00000596163 TIGITQ495A1 244 aa13.02□□□□□ -0.33
SHKBP1-212ENST00000596163 C11orf87Q6NUJ2 197 aa13.02□□□□□ -0.33
SHKBP1-212ENST00000596163 ZBTB8BQ8NAP8 495 aaPredicted RBP13.02□□□□□ -0.33
SHKBP1-212ENST00000596163 NPIPB3Q92617 1050 aa13.02□□□□□ -0.33
SHKBP1-212ENST00000596163 WDR89Q96FK6 387 aaPredicted RBP13.02□□□□□ -0.33
SHKBP1-212ENST00000596163 NEURL2Q9BR09 285 aa13.02□□□□□ -0.33
SHKBP1-212ENST00000596163 SEC22CQ9BRL7 303 aa13.02□□□□□ -0.33
SHKBP1-212ENST00000596163 RHPN1-AS1Q9BWJ2 59 aa13.02□□□□□ -0.33
SHKBP1-212ENST00000596163 TMEM231Q9H6L2 316 aa13.02□□□□□ -0.33
SHKBP1-212ENST00000596163 TUBA4BQ9H853 241 aa13.02□□□□□ -0.33
SHKBP1-212ENST00000596163 GSKIPQ9P0R6 139 aa13.02□□□□□ -0.33
SHKBP1-212ENST00000596163 STRAPQ9Y3F4 350 aaKnown RBP13.02□□□□□ -0.33
SHKBP1-212ENST00000596163 A0A1W2PS18 150 aa13.01□□□□□ -0.33
SHKBP1-212ENST00000596163 MPTX1A8MV57 137 aa13.01□□□□□ -0.33
SHKBP1-212ENST00000596163 A8MZ25 164 aa13.01□□□□□ -0.33
SHKBP1-212ENST00000596163 SCAF4O95104 1147 aaKnown RBP13.01□□□□□ -0.33
SHKBP1-212ENST00000596163 IGKV1-17P01599 117 aa13.01□□□□□ -0.33
SHKBP1-212ENST00000596163 IGLC1P0CG04 106 aa13.01□□□□□ -0.33
SHKBP1-212ENST00000596163 NPPCP23582 126 aa13.01□□□□□ -0.33
SHKBP1-212ENST00000596163 POLR2GP62487 172 aaKnown RBP eCLIP13.01□□□□□ -0.33
SHKBP1-212ENST00000596163 SPANXN5Q5MJ07 72 aa13.01□□□□□ -0.33
SHKBP1-212ENST00000596163 NARS2Q96I59 477 aaKnown RBP13.01□□□□□ -0.33
SHKBP1-212ENST00000596163 METTL26Q96S19 204 aa13.01□□□□□ -0.33
SHKBP1-212ENST00000596163 SPAG8Q99932 426 aaPredicted RBP13.01□□□□□ -0.33
SHKBP1-212ENST00000596163 FAM25EA8MYX2 175 aa13□□□□□ -0.33
SHKBP1-212ENST00000596163 CHEK1O14757 476 aa13□□□□□ -0.33
SHKBP1-212ENST00000596163 TSPAN4O14817 238 aa13□□□□□ -0.33
SHKBP1-212ENST00000596163 PRAF2O60831 178 aa13□□□□□ -0.33
SHKBP1-212ENST00000596163 SCGB1D2O95969 90 aa13□□□□□ -0.33
SHKBP1-212ENST00000596163 FABP1P07148 127 aa13□□□□□ -0.33
SHKBP1-212ENST00000596163 IGHV4-30-4P0DP06 118 aa13□□□□□ -0.33
SHKBP1-212ENST00000596163 ZNF414Q96IQ9 312 aa13□□□□□ -0.33
SHKBP1-212ENST00000596163 SMIM8Q96KF7 97 aa13□□□□□ -0.33
SHKBP1-212ENST00000596163 RAB40CQ96S21 281 aa13□□□□□ -0.33
SHKBP1-212ENST00000596163 ZFAND3Q9H8U3 227 aa13□□□□□ -0.33
SHKBP1-212ENST00000596163 PSENENQ9NZ42 101 aa13□□□□□ -0.33
SHKBP1-212ENST00000596163 C5orf51A6NDU8 294 aa12.99□□□□□ -0.33
SHKBP1-212ENST00000596163 SSSCA1O60232 199 aa12.99□□□□□ -0.33
SHKBP1-212ENST00000596163 FRMD6-AS1P0C7T7 363 aa12.99□□□□□ -0.33
SHKBP1-212ENST00000596163 RD3LP0DJH9 198 aa12.99□□□□□ -0.33
SHKBP1-212ENST00000596163 TAS2R30P59541 319 aa12.99□□□□□ -0.33
SHKBP1-212ENST00000596163 GAMTQ14353 236 aa12.99□□□□□ -0.33
SHKBP1-212ENST00000596163 NRARPQ7Z6K4 114 aa12.99□□□□□ -0.33
SHKBP1-212ENST00000596163 SELENOKQ9Y6D0 94 aa12.99□□□□□ -0.33
SHKBP1-212ENST00000596163 OR4C46A6NHA9 309 aa12.98□□□□□ -0.33
SHKBP1-212ENST00000596163 ZFP92A6NM28 416 aa12.98□□□□□ -0.33
SHKBP1-212ENST00000596163 INMT-MINDY4F8WBC2 141 aa12.98□□□□□ -0.33
SHKBP1-212ENST00000596163 TOMM40O96008 361 aa12.98□□□□□ -0.33
SHKBP1-212ENST00000596163 PAFAH1B2P68402 229 aa12.98□□□□□ -0.33
SHKBP1-212ENST00000596163 GSG1LQ6UXU4 331 aa12.98□□□□□ -0.33
SHKBP1-212ENST00000596163 GRAMD2BQ96HH9 432 aa12.98□□□□□ -0.33
SHKBP1-212ENST00000596163 C2orf50Q96LR7 162 aa12.98□□□□□ -0.33
SHKBP1-212ENST00000596163 C19orf73Q9NVV2 129 aa12.98□□□□□ -0.33
SHKBP1-212ENST00000596163 SNRPGP15A8MWD9 76 aa12.97□□□□□ -0.33
SHKBP1-212ENST00000596163 OR11H12B2RN74 326 aa12.97□□□□□ -0.33
SHKBP1-212ENST00000596163 CD7P09564 240 aa12.97□□□□□ -0.33
SHKBP1-212ENST00000596163 CMC4P56277 68 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-212ENST00000596163 RNF2Q99496 336 aa12.97□□□□□ -0.33
SHKBP1-212ENST00000596163 ASCL2Q99929 193 aa12.97□□□□□ -0.33
SHKBP1-212ENST00000596163 VSIRQ9H7M9 311 aa12.97□□□□□ -0.33
SHKBP1-212ENST00000596163 PFDN2Q9UHV9 154 aa12.97□□□□□ -0.33
SHKBP1-212ENST00000596163 IGHV3-49A0A0A0MS15 119 aa12.96□□□□□ -0.33
SHKBP1-212ENST00000596163 H3BP45 60 aa12.96□□□□□ -0.33
SHKBP1-212ENST00000596163 L7N2F9 121 aa12.96□□□□□ -0.33
SHKBP1-212ENST00000596163 CCSO14618 274 aa12.96□□□□□ -0.33
SHKBP1-212ENST00000596163 CRYBB3P26998 211 aa12.96□□□□□ -0.33
SHKBP1-212ENST00000596163 VAMP2P63027 116 aa12.96□□□□□ -0.33
SHKBP1-212ENST00000596163 OR51G1Q8NGK1 321 aa12.96□□□□□ -0.33
SHKBP1-212ENST00000596163 MARVELD1Q9BSK0 173 aa12.96□□□□□ -0.33
SHKBP1-212ENST00000596163 IGHV3OR16-13A0A075B7E8 117 aa12.95□□□□□ -0.34
SHKBP1-212ENST00000596163 IGHV3-74A0A0B4J1X5 117 aa12.95□□□□□ -0.34
SHKBP1-212ENST00000596163 TSC22D2O75157 780 aa12.95□□□□□ -0.34
SHKBP1-212ENST00000596163 CFDP00746 253 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-212ENST00000596163 MBPP02686 304 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-212ENST00000596163 IL4P05112 153 aa12.95□□□□□ -0.34
SHKBP1-212ENST00000596163 HNRNPCP07910 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
SHKBP1-212ENST00000596163 PVALBP20472 110 aaPredicted RBP12.95□□□□□ -0.34
SHKBP1-212ENST00000596163 EIF2B2P49770 351 aaKnown RBP12.95□□□□□ -0.34
SHKBP1-212ENST00000596163 TCF24Q7RTU0 167 aa12.95□□□□□ -0.34
SHKBP1-212ENST00000596163 ST8SIA2Q92186 375 aa12.95□□□□□ -0.34
SHKBP1-212ENST00000596163 TRGV9Q99603 122 aa12.95□□□□□ -0.34
SHKBP1-212ENST00000596163 PSG1P11464 419 aa12.94□□□□□ -0.34
SHKBP1-212ENST00000596163 NUP62P37198 522 aaPredicted RBP12.94□□□□□ -0.34
SHKBP1-212ENST00000596163 PAX9P55771 341 aa12.94□□□□□ -0.34
SHKBP1-212ENST00000596163 RPL11P62913 178 aaKnown RBP12.94□□□□□ -0.34
SHKBP1-212ENST00000596163 FAM90A2PQ658T7 463 aa12.94□□□□□ -0.34
SHKBP1-212ENST00000596163 SBSPONQ8IVN8 264 aa12.94□□□□□ -0.34
SHKBP1-212ENST00000596163 DEFB125Q8N687 156 aa12.94□□□□□ -0.34
SHKBP1-212ENST00000596163 ZMAT4Q9H898 229 aa12.94□□□□□ -0.34
SHKBP1-212ENST00000596163 SRD5A3Q9H8P0 318 aa12.94□□□□□ -0.34
SHKBP1-212ENST00000596163 RABAC1Q9UI14 185 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms