RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 TMEM56-RWDD3S4R434 201 aa9.97□□□□□ -0.81
SHKBP1-208ENST00000595726 IGHV3OR16-8A0A075B7F1 116 aa9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 TRAV10A0A0B4J240 114 aa9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 OR4C46A6NHA9 309 aa9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 C16orf90A8MZG2 172 aa9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 NDUFA4O00483 81 aa9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 MT-CO2P00403 227 aa9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 CA1P00915 261 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 CTSGP08311 255 aa9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 SUPT4H1P63272 117 aaKnown RBP9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 LAMTOR1Q6IAA8 161 aa9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 Q8NAQ8 132 aa9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 DEDD2Q8WXF8 326 aa9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 IL22RA2Q969J5 263 aa9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 PINX1Q96BK5 328 aaKnown RBP9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 SRRQ9GZT4 340 aa9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 SCRT2Q9NQ03 307 aa9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 PRR13Q9NZ81 148 aa9.96□□□□□ -0.82
SHKBP1-208ENST00000595726 UBR4Q5T4S7 5183 aa9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 ZNF207O43670 478 aaKnown RBP9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 IGHV3-48P01763 117 aa9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 RNASE2P10153 161 aaKnown RBP9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 AKR1C4P17516 323 aa9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 SNCAP37840 140 aa9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 TFPI2P48307 235 aa9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 MFAP4P55083 255 aa9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 BSXQ3C1V8 233 aa9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 SPANXN2Q5MJ10 180 aa9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 ZNF767PQ75MW2 155 aa9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 OR52E5Q8NH55 327 aa9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 GPR146Q96CH1 333 aa9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 TXN2Q99757 166 aa9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 RNF126Q9BV68 326 aa9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 HRH4Q9H3N8 390 aa9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 DAZ1Q9NQZ3 744 aaKnown RBP9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 CACNG5Q9UF02 275 aa9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 KCNIP3Q9Y2W7 256 aa9.95□□□□□ -0.82
SHKBP1-208ENST00000595726 IGHV4-28A0A0C4DH34 117 aa9.94□□□□□ -0.82
SHKBP1-208ENST00000595726 NUPL2O15504 423 aaKnown RBP9.94□□□□□ -0.82
SHKBP1-208ENST00000595726 P0DMU3 169 aa9.94□□□□□ -0.82
SHKBP1-208ENST00000595726 FAM231AP0DMU4 169 aa9.94□□□□□ -0.82
SHKBP1-208ENST00000595726 FAM231CP0DMU5 169 aa9.94□□□□□ -0.82
SHKBP1-208ENST00000595726 SPCS3P61009 180 aa9.94□□□□□ -0.82
SHKBP1-208ENST00000595726 Q6ZR54 194 aa9.94□□□□□ -0.82
SHKBP1-208ENST00000595726 ENY2Q9NPA8 101 aa9.94□□□□□ -0.82
SHKBP1-208ENST00000595726 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.94□□□□□ -0.82
SHKBP1-208ENST00000595726 IGKV3-7A0A075B6H7 116 aa9.93□□□□□ -0.82
SHKBP1-208ENST00000595726 A0A0B4J2A0 478 aa9.93□□□□□ -0.82
SHKBP1-208ENST00000595726 C15orf62A8K5M9 175 aa9.93□□□□□ -0.82
SHKBP1-208ENST00000595726 CORTO00230 105 aa9.93□□□□□ -0.82
SHKBP1-208ENST00000595726 GNG7O60262 68 aa9.93□□□□□ -0.82
SHKBP1-208ENST00000595726 SUB1P53999 127 aaKnown RBP eCLIP9.93□□□□□ -0.82
SHKBP1-208ENST00000595726 RELQ04864 619 aaPredicted RBP9.93□□□□□ -0.82
SHKBP1-208ENST00000595726 NMSQ5H8A3 153 aa9.93□□□□□ -0.82
SHKBP1-208ENST00000595726 TMED4Q7Z7H5 227 aa9.93□□□□□ -0.82
SHKBP1-208ENST00000595726 C20orf24Q9BUV8 137 aa9.93□□□□□ -0.82
SHKBP1-208ENST00000595726 SHPKQ9UHJ6 478 aa9.93□□□□□ -0.82
SHKBP1-208ENST00000595726 FAT1Q14517 4588 aa9.92□□□□□ -0.82
SHKBP1-208ENST00000595726 ELOA3CA0A087WX78 387 aaPredicted RBP9.92□□□□□ -0.82
SHKBP1-208ENST00000595726 K7EMT4 169 aa9.92□□□□□ -0.82
SHKBP1-208ENST00000595726 NXPH3O95157 252 aa9.92□□□□□ -0.82
SHKBP1-208ENST00000595726 SULT1A3P0DMM9 295 aa9.92□□□□□ -0.82
SHKBP1-208ENST00000595726 SULT1A4P0DMN0 295 aa9.92□□□□□ -0.82
SHKBP1-208ENST00000595726 ANXA3P12429 323 aa9.92□□□□□ -0.82
SHKBP1-208ENST00000595726 SRPXP78539 464 aa9.92□□□□□ -0.82
SHKBP1-208ENST00000595726 BAK1Q16611 211 aa9.92□□□□□ -0.82
SHKBP1-208ENST00000595726 TMEM128Q5BJH2 165 aa9.92□□□□□ -0.82
SHKBP1-208ENST00000595726 LYZL2Q7Z4W2 148 aa9.92□□□□□ -0.82
SHKBP1-208ENST00000595726 OR10C1Q96KK4 312 aa9.92□□□□□ -0.82
SHKBP1-208ENST00000595726 SLC25A21Q9BQT8 299 aaPredicted RBP9.92□□□□□ -0.82
SHKBP1-208ENST00000595726 FNDC4Q9H6D8 234 aaPredicted RBP9.92□□□□□ -0.82
SHKBP1-208ENST00000595726 MYCBP2O75592 4640 aa9.92□□□□□ -0.82
SHKBP1-208ENST00000595726 DEFB131BA0A096LNP1 70 aa9.91□□□□□ -0.82
SHKBP1-208ENST00000595726 OPRK1P41145 380 aa9.91□□□□□ -0.82
SHKBP1-208ENST00000595726 HTR2BP41595 481 aa9.91□□□□□ -0.82
SHKBP1-208ENST00000595726 NPBWR1P48145 328 aa9.91□□□□□ -0.82
SHKBP1-208ENST00000595726 TRIQKQ629K1 86 aa9.91□□□□□ -0.82
SHKBP1-208ENST00000595726 LGI3Q8N145 548 aa9.91□□□□□ -0.82
SHKBP1-208ENST00000595726 GBGT1Q8N5D6 347 aa9.91□□□□□ -0.82
SHKBP1-208ENST00000595726 DUSP18Q8NEJ0 188 aa9.91□□□□□ -0.82
SHKBP1-208ENST00000595726 RNF2Q99496 336 aa9.91□□□□□ -0.82
SHKBP1-208ENST00000595726 SDHCQ99643 169 aaPredicted RBP9.91□□□□□ -0.82
SHKBP1-208ENST00000595726 NDUFA13Q9P0J0 144 aa9.91□□□□□ -0.82
SHKBP1-208ENST00000595726 MRPL36Q9P0J6 103 aaKnown RBP9.91□□□□□ -0.82
SHKBP1-208ENST00000595726 IGHV3-49A0A0A0MS15 119 aa9.9□□□□□ -0.82
SHKBP1-208ENST00000595726 CEBPZOSA8MTT3 80 aa9.9□□□□□ -0.82
SHKBP1-208ENST00000595726 YIF1AO95070 293 aa9.9□□□□□ -0.82
SHKBP1-208ENST00000595726 IFNA10P01566 189 aa9.9□□□□□ -0.82
SHKBP1-208ENST00000595726 AMBPP02760 352 aa9.9□□□□□ -0.82
SHKBP1-208ENST00000595726 CCR6P51684 374 aa9.9□□□□□ -0.82
SHKBP1-208ENST00000595726 TNP2Q05952 138 aa9.9□□□□□ -0.82
SHKBP1-208ENST00000595726 SMCO1Q147U7 214 aa9.9□□□□□ -0.82
SHKBP1-208ENST00000595726 C2orf83Q53S99 150 aa9.9□□□□□ -0.82
SHKBP1-208ENST00000595726 SOHLH1Q5JUK2 328 aa9.9□□□□□ -0.82
SHKBP1-208ENST00000595726 SLC24A4Q8NFF2 622 aa9.9□□□□□ -0.82
SHKBP1-208ENST00000595726 NDUFAF3Q9BU61 184 aa9.9□□□□□ -0.82
SHKBP1-208ENST00000595726 HEYLQ9NQ87 328 aaPredicted RBP9.9□□□□□ -0.82
SHKBP1-208ENST00000595726 HSPB7Q9UBY9 170 aa9.9□□□□□ -0.82
SHKBP1-208ENST00000595726 CACFD1Q9UGQ2 172 aa9.9□□□□□ -0.82
SHKBP1-208ENST00000595726 CELA1Q9UNI1 258 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms