RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 OR1S2Q8NGQ3 325 aa17.29■□□□□ 0.36
LSM4-204ENST00000594828 NARS2Q96I59 477 aaKnown RBP17.29■□□□□ 0.36
LSM4-204ENST00000594828 SHPKQ9UHJ6 478 aa17.29■□□□□ 0.36
LSM4-204ENST00000594828 ANXA3P12429 323 aa17.28■□□□□ 0.36
LSM4-204ENST00000594828 FAUP35544 74 aaKnown RBP17.28■□□□□ 0.36
LSM4-204ENST00000594828 CCR6P51684 374 aa17.28■□□□□ 0.36
LSM4-204ENST00000594828 RND2P52198 227 aa17.28■□□□□ 0.36
LSM4-204ENST00000594828 SUPT4H1P63272 117 aaKnown RBP17.28■□□□□ 0.36
LSM4-204ENST00000594828 EWSR1Q01844 656 aaKnown RBP eCLIP17.28■□□□□ 0.36
LSM4-204ENST00000594828 PYDC2Q56P42 97 aa17.28■□□□□ 0.36
LSM4-204ENST00000594828 ETFRF1Q6IPR1 90 aa17.28■□□□□ 0.36
LSM4-204ENST00000594828 LYZL2Q7Z4W2 148 aa17.28■□□□□ 0.36
LSM4-204ENST00000594828 Q8WTZ3 238 aa17.28■□□□□ 0.36
LSM4-204ENST00000594828 TMEM170AQ8WVE7 144 aa17.28■□□□□ 0.36
LSM4-204ENST00000594828 RABAC1Q9UI14 185 aa17.28■□□□□ 0.36
LSM4-204ENST00000594828 CXorf65A6NEN9 183 aa17.27■□□□□ 0.36
LSM4-204ENST00000594828 IGLC1P0CG04 106 aa17.27■□□□□ 0.36
LSM4-204ENST00000594828 NPY1RP25929 384 aa17.27■□□□□ 0.36
LSM4-204ENST00000594828 DEFB131AP59861 70 aa17.27■□□□□ 0.36
LSM4-204ENST00000594828 PMS2P11Q13670 270 aa17.27■□□□□ 0.36
LSM4-204ENST00000594828 LGI3Q8N145 548 aa17.27■□□□□ 0.36
LSM4-204ENST00000594828 CCDC160A6NGH7 325 aa17.26■□□□□ 0.35
LSM4-204ENST00000594828 OR10J1P30954 320 aa17.26■□□□□ 0.35
LSM4-204ENST00000594828 P2RY1P47900 373 aa17.26■□□□□ 0.35
LSM4-204ENST00000594828 AP3S2P59780 193 aa17.26■□□□□ 0.35
LSM4-204ENST00000594828 YPEL3P61236 119 aaPredicted RBP17.26■□□□□ 0.35
LSM4-204ENST00000594828 SRPXP78539 464 aa17.26■□□□□ 0.35
LSM4-204ENST00000594828 KLF9Q13886 244 aaPredicted RBP17.26■□□□□ 0.35
LSM4-204ENST00000594828 SMCO1Q147U7 214 aa17.26■□□□□ 0.35
LSM4-204ENST00000594828 LEMD1Q68G75 181 aa17.26■□□□□ 0.35
LSM4-204ENST00000594828 FAM24BQ8N5W8 94 aa17.26■□□□□ 0.35
LSM4-204ENST00000594828 GRAMD2BQ96HH9 432 aa17.26■□□□□ 0.35
LSM4-204ENST00000594828 U3KQ87 197 aa17.26■□□□□ 0.35
LSM4-204ENST00000594828 IFNA10P01566 189 aa17.25■□□□□ 0.35
LSM4-204ENST00000594828 ATF4P18848 351 aaPredicted RBP17.25■□□□□ 0.35
LSM4-204ENST00000594828 RBMS2Q15434 407 aaKnown RBP17.25■□□□□ 0.35
LSM4-204ENST00000594828 TOMM5Q8N4H5 51 aa17.25■□□□□ 0.35
LSM4-204ENST00000594828 TMEM217Q8N7C4 229 aa17.25■□□□□ 0.35
LSM4-204ENST00000594828 STXBP6Q8NFX7 210 aa17.25■□□□□ 0.35
LSM4-204ENST00000594828 GATAD1Q8WUU5 269 aa17.25■□□□□ 0.35
LSM4-204ENST00000594828 NPIPB3Q92617 1050 aa17.25■□□□□ 0.35
LSM4-204ENST00000594828 HSPB7Q9UBY9 170 aa17.25■□□□□ 0.35
LSM4-204ENST00000594828 S100A5P33763 92 aa17.24■□□□□ 0.35
LSM4-204ENST00000594828 DTD1Q8TEA8 209 aa17.24■□□□□ 0.35
LSM4-204ENST00000594828 TRIM63Q969Q1 353 aa17.24■□□□□ 0.35
LSM4-204ENST00000594828 RARRES2Q99969 163 aa17.24■□□□□ 0.35
LSM4-204ENST00000594828 RBKSQ9H477 322 aa17.24■□□□□ 0.35
LSM4-204ENST00000594828 V9GYH0 126 aa17.24■□□□□ 0.35
LSM4-204ENST00000594828 PIGBOS1A0A0B4J2F0 54 aa17.23■□□□□ 0.35
LSM4-204ENST00000594828 K7EQG2 157 aa17.23■□□□□ 0.35
LSM4-204ENST00000594828 TMED4Q7Z7H5 227 aa17.23■□□□□ 0.35
LSM4-204ENST00000594828 ACY3Q96HD9 319 aa17.23■□□□□ 0.35
LSM4-204ENST00000594828 U3KQE9 123 aa17.23■□□□□ 0.35
LSM4-204ENST00000594828 DNAH1Q9P2D7 4330 aa17.23■□□□□ 0.35
LSM4-204ENST00000594828 NUPR2A6NF83 97 aa17.22■□□□□ 0.35
LSM4-204ENST00000594828 HNRNPCP07910 306 aaKnown RBP eCLIP17.22■□□□□ 0.35
LSM4-204ENST00000594828 EIF2B2P49770 351 aaKnown RBP17.22■□□□□ 0.35
LSM4-204ENST00000594828 TMEM128Q5BJH2 165 aa17.22■□□□□ 0.35
LSM4-204ENST00000594828 OR1S1Q8NH92 325 aa17.22■□□□□ 0.35
LSM4-204ENST00000594828 CA1P00915 261 aaPredicted RBP17.21■□□□□ 0.35
LSM4-204ENST00000594828 IL4P05112 153 aa17.21■□□□□ 0.35
LSM4-204ENST00000594828 ZNF79Q15937 498 aa17.21■□□□□ 0.35
LSM4-204ENST00000594828 STHQ8IWL8 128 aa17.21■□□□□ 0.35
LSM4-204ENST00000594828 HELTA6NFD8 242 aa17.2■□□□□ 0.34
LSM4-204ENST00000594828 TOMM40O96008 361 aa17.2■□□□□ 0.34
LSM4-204ENST00000594828 IFNA4P05014 189 aa17.2■□□□□ 0.34
LSM4-204ENST00000594828 RD3LP0DJH9 198 aa17.2■□□□□ 0.34
LSM4-204ENST00000594828 AP2S1P53680 142 aaPredicted RBP17.2■□□□□ 0.34
LSM4-204ENST00000594828 ATP5IP56385 69 aaPredicted RBP17.2■□□□□ 0.34
LSM4-204ENST00000594828 CEMP1Q6PRD7 247 aaPredicted RBP17.2■□□□□ 0.34
LSM4-204ENST00000594828 C16orf54Q6UWD8 224 aa17.2■□□□□ 0.34
LSM4-204ENST00000594828 OR11H2Q8NH07 326 aa17.2■□□□□ 0.34
LSM4-204ENST00000594828 DCANP1Q8TF63 244 aa17.2■□□□□ 0.34
LSM4-204ENST00000594828 SLC25A21Q9BQT8 299 aaPredicted RBP17.2■□□□□ 0.34
LSM4-204ENST00000594828 DUXBA0A1W2PPF3 345 aa17.19■□□□□ 0.34
LSM4-204ENST00000594828 ZNF688P0C7X2 276 aa17.19■□□□□ 0.34
LSM4-204ENST00000594828 VAMP1P23763 118 aa17.19■□□□□ 0.34
LSM4-204ENST00000594828 USF2Q15853 346 aaPredicted RBP17.19■□□□□ 0.34
LSM4-204ENST00000594828 CCDC190Q86UF4 302 aa17.19■□□□□ 0.34
LSM4-204ENST00000594828 DEDD2Q8WXF8 326 aa17.19■□□□□ 0.34
LSM4-204ENST00000594828 DHRS2Q13268 280 aa17.18■□□□□ 0.34
LSM4-204ENST00000594828 GLMPQ8WWB7 406 aa17.18■□□□□ 0.34
LSM4-204ENST00000594828 PITX3O75364 302 aa17.17■□□□□ 0.34
LSM4-204ENST00000594828 PSG1P11464 419 aa17.17■□□□□ 0.34
LSM4-204ENST00000594828 GPX4P36969 197 aaPredicted RBP17.17■□□□□ 0.34
LSM4-204ENST00000594828 LRTM2Q8N967 370 aa17.17■□□□□ 0.34
LSM4-204ENST00000594828 KLK5Q9Y337 293 aaPredicted RBP17.17■□□□□ 0.34
LSM4-204ENST00000594828 HYDINQ4G0P3 5121 aa17.16■□□□□ 0.34
LSM4-204ENST00000594828 TRPT1Q86TN4 253 aaKnown RBP17.16■□□□□ 0.34
LSM4-204ENST00000594828 RBM38Q9H0Z9 239 aaKnown RBP17.16■□□□□ 0.34
LSM4-204ENST00000594828 KNCNA6PVL3 124 aa17.15■□□□□ 0.34
LSM4-204ENST00000594828 BUB3O43684 328 aa17.15■□□□□ 0.34
LSM4-204ENST00000594828 SLC25A6P12236 298 aa17.15■□□□□ 0.34
LSM4-204ENST00000594828 GAMTQ14353 236 aa17.15■□□□□ 0.34
LSM4-204ENST00000594828 SPANXN2Q5MJ10 180 aa17.15■□□□□ 0.34
LSM4-204ENST00000594828 OR51G1Q8NGK1 321 aa17.15■□□□□ 0.34
LSM4-204ENST00000594828 LINC00476Q8WZB0 136 aa17.15■□□□□ 0.34
LSM4-204ENST00000594828 SLC35E1Q96K37 410 aa17.15■□□□□ 0.34
LSM4-204ENST00000594828 PLECQ15149 4684 aaKnown RBP17.14■□□□□ 0.33
LSM4-204ENST00000594828 ZFP92A6NM28 416 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms