RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 TRAV9-2A0A087WT02 112 aa11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 IGKV3-20P01619 116 aa11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 EFNA2O43921 213 aa11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 GHRHP01286 108 aa11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 PLAURQ03405 335 aa11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 CLEC19AQ6UXS0 136 aa11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 ATP5L2Q7Z4Y8 100 aa11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 PLPPR1Q8TBJ4 325 aa11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 GOLGB1Q14789 3259 aaKnown RBP11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 TRBV24-1A0A075B6N3 115 aa11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 IGHV3-23P01764 117 aa11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 CD69Q07108 199 aa11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 FABP5P3A8MUU1 101 aa11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 IGFL3Q6UXB1 125 aa11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 CHCHD1Q96BP2 118 aaKnown RBP11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 NXT2Q9NPJ8 142 aaKnown RBP11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 H0YIZ8 118 aa11.04□□□□□ -0.64
SMARCA4-216ENST00000591545 OR13C6PQ8NH95 151 aa11.04□□□□□ -0.64
SMARCA4-216ENST00000591545 CRIM1Q9NZV1 1036 aa11.04□□□□□ -0.64
SMARCA4-216ENST00000591545 WDR83OSQ9Y284 106 aa11.04□□□□□ -0.64
SMARCA4-216ENST00000591545 SAA1P0DJI8 122 aaPredicted RBP11.04□□□□□ -0.64
SMARCA4-216ENST00000591545 FOXG1P55316 489 aaPredicted RBP11.04□□□□□ -0.64
SMARCA4-216ENST00000591545 TRAV1-1A0A0B4J248 108 aa11.04□□□□□ -0.64
SMARCA4-216ENST00000591545 ADMP35318 185 aa11.04□□□□□ -0.64
SMARCA4-216ENST00000591545 HEPN1Q6WQI6 88 aa11.04□□□□□ -0.64
SMARCA4-216ENST00000591545 C1QL4Q86Z23 238 aa11.04□□□□□ -0.64
SMARCA4-216ENST00000591545 OR5A1Q8NGJ0 315 aa11.04□□□□□ -0.64
SMARCA4-216ENST00000591545 EPDR1Q9UM22 224 aa11.04□□□□□ -0.64
SMARCA4-216ENST00000591545 HBDP02042 147 aa11.04□□□□□ -0.64
SMARCA4-216ENST00000591545 CD5P06127 495 aa11.04□□□□□ -0.64
SMARCA4-216ENST00000591545 CACNG7P62955 275 aa11.04□□□□□ -0.64
SMARCA4-216ENST00000591545 PIP4P1Q86T03 277 aa11.04□□□□□ -0.64
SMARCA4-216ENST00000591545 IGHV3-49A0A0A0MS15 119 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 IGKV1D-13A0A0B4J2D9 117 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 HIST1H2BKO60814 126 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 HIST1H2BJP06899 126 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 IGKV1-13P0DP09 117 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 HIST1H2BOP23527 126 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 HIST1H2BBP33778 126 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 HIST1H2BDP58876 126 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 HIST1H2BCP62807 126 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 HIST2H2BEQ16778 126 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 HIST1H2BHQ93079 126 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 HIST1H2BNQ99877 126 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 HIST1H2BMQ99879 126 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 POLEQ07864 2286 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 C9JCJ5 164 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 SRD5A1P18405 259 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 DPH3Q96FX2 82 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 SLC25A2Q9BXI2 301 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 IGKV1-9A0A0C4DH69 117 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 PGPEP1LA6NFU8 196 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 NDUFS8O00217 210 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 RNASE1P07998 156 aaKnown RBP11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 SRRM5B3KS81 715 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 TMEM50AO95807 157 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 PRCDQ00LT1 54 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 NSUN5P1Q3KNT7 163 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 FAM19A2Q8N3H0 131 aa11.03□□□□□ -0.64
SMARCA4-216ENST00000591545 SAA2-SAA4A0A096LPE2 208 aa11.02□□□□□ -0.64
SMARCA4-216ENST00000591545 SAA2P0DJI9 122 aaPredicted RBP11.02□□□□□ -0.64
SMARCA4-216ENST00000591545 FGFBP3Q8TAT2 258 aa11.02□□□□□ -0.64
SMARCA4-216ENST00000591545 S4R3C0 116 aa11.02□□□□□ -0.64
SMARCA4-216ENST00000591545 TYMSP04818 313 aa11.02□□□□□ -0.65
SMARCA4-216ENST00000591545 LINC01356Q8N9X3 169 aa11.02□□□□□ -0.65
SMARCA4-216ENST00000591545 DOCK8Q8NF50 2099 aa11.02□□□□□ -0.65
SMARCA4-216ENST00000591545 DOPEY2Q9Y3R5 2298 aa11.02□□□□□ -0.65
SMARCA4-216ENST00000591545 OOSP1A8MZH6 123 aa11.02□□□□□ -0.65
SMARCA4-216ENST00000591545 TMEM178BH3BS89 294 aa11.02□□□□□ -0.65
SMARCA4-216ENST00000591545 CRYGSP22914 178 aa11.02□□□□□ -0.65
SMARCA4-216ENST00000591545 PRR30Q53SZ7 412 aaPredicted RBP11.02□□□□□ -0.65
SMARCA4-216ENST00000591545 MORN2Q502X0 79 aa11.02□□□□□ -0.65
SMARCA4-216ENST00000591545 LYZL4Q96KX0 146 aa11.02□□□□□ -0.65
SMARCA4-216ENST00000591545 ZNF257Q9Y2Q1 563 aa11.02□□□□□ -0.65
SMARCA4-216ENST00000591545 TEX38Q6PEX7 206 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 PAQR4Q8N4S7 273 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 COL4A6Q14031 1691 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 RBMY1BA6NDE4 496 aaKnown RBP11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 RBMY1EA6NEQ0 496 aaKnown RBP11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 TIMM23O14925 209 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 DPM2O94777 84 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 RBMY1DP0C7P1 496 aaKnown RBP11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 RBMY1A1P0DJD3 496 aaKnown RBP11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 RBMY1CP0DJD4 496 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 LEPP41159 167 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 ORMDL2Q53FV1 153 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 MINOS1Q5TGZ0 78 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 LHFPL1Q86WI0 220 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 ST20Q9HBF5 79 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 MINOS1-NBL1R4GNA1 71 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 MUC6Q6W4X9 2439 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 ROS1P08922 2347 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 LINC00614P0C842 121 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 SEC11AP67812 179 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 GAS1P54826 345 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 C11orf44Q8N8P7 122 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 TSKUQ8WUA8 353 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 ST6GALNAC6Q969X2 333 aa11.01□□□□□ -0.65
SMARCA4-216ENST00000591545 MS4A6AQ9H2W1 248 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms