RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 Q56UQ5 140 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 TMEM217Q8N7C4 229 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 ZNF114Q8NC26 417 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 OR1P1Q8NH06 330 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 OR52E5Q8NH55 327 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 DPF1Q92782 380 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 USMG5Q96IX5 58 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 OR10C1Q96KK4 312 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 UBE2E2Q96LR5 201 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 HIPK2Q9H2X6 1198 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 ZC4H2Q9NQZ6 224 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 THYN1Q9P016 225 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 RCL1Q9Y2P8 373 aaKnown RBP4.94□□□□□ -1.62
VPS4B-205ENST00000591383 DMRT1Q9Y5R6 373 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 TRBV9A0A0B4J1U6 114 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 C7orf66A4D0T2 115 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 OR2T8A6NH00 312 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 LINC01619G3V211 115 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 L7N2F9 121 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 PAX4O43316 350 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 SYNGR2O43760 224 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 MT-CO2P00403 227 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 IFNA4P05014 189 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 EDN2P20800 178 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 HTR2BP41595 481 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 BLOC1S1P78537 153 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 ZNF616Q08AN1 781 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 RPEL1Q2QD12 228 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 SPANXN5Q5MJ07 72 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 CLEC19AQ6UXS0 136 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 OR11H1Q8NG94 326 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 OR4D5Q8NGN0 318 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 OR1L6Q8NGR2 347 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 OR1N2Q8NGR9 330 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 CXorf58Q96LI9 332 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 CIB3Q96Q77 187 aaPredicted RBP4.93□□□□□ -1.62
VPS4B-205ENST00000591383 MLST8Q9BVC4 326 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 MED28Q9H204 178 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 C21orf62Q9NYP8 219 aa4.93□□□□□ -1.62
VPS4B-205ENST00000591383 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.92□□□□□ -1.62
VPS4B-205ENST00000591383 TRBV7-1A0A0A6YYK4 115 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 IGHV3-35A0A0C4DH35 117 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 RPS10-NUDT3A0A1W2PQS6 291 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 SMCO3A2RU48 225 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 USP17L23D6RBM5 183 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 I3L521 148 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 K7EIM0 57 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 K7EPK0 472 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 CORTO00230 105 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 BMPR1BO00238 502 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 PITX3O75364 302 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 HSPB1P04792 205 aaKnown RBP4.92□□□□□ -1.62
VPS4B-205ENST00000591383 PVALBP20472 110 aaPredicted RBP4.92□□□□□ -1.62
VPS4B-205ENST00000591383 HOXD3P31249 432 aaPredicted RBP4.92□□□□□ -1.62
VPS4B-205ENST00000591383 MYCNOSP40205 109 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 BCAP31P51572 246 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 CAV2P51636 162 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 RND2P52198 227 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 RUNX1Q01196 453 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 KIAA0141Q14154 515 aaPredicted RBP4.92□□□□□ -1.62
VPS4B-205ENST00000591383 OXA1LQ15070 435 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 PDLIM3Q53GG5 364 aaPredicted RBP4.92□□□□□ -1.62
VPS4B-205ENST00000591383 ZNF343Q6P1L6 599 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 SLC16A13Q7RTY0 426 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 NOXA1Q86UR1 476 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 ZNF502Q8TBZ5 544 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 DAZAP1Q96EP5 407 aaKnown RBP4.92□□□□□ -1.62
VPS4B-205ENST00000591383 SAT2Q96F10 170 aaPredicted RBP4.92□□□□□ -1.62
VPS4B-205ENST00000591383 ACY3Q96HD9 319 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 SLC35E1Q96K37 410 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 C2orf50Q96LR7 162 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 OR4C12Q96R67 309 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 PEF1Q9UBV8 284 aaKnown RBP4.92□□□□□ -1.62
VPS4B-205ENST00000591383 FBXL17Q9UF56 701 aa4.92□□□□□ -1.62
VPS4B-205ENST00000591383 STRAPQ9Y3F4 350 aaKnown RBP4.92□□□□□ -1.62
VPS4B-205ENST00000591383 NOTCH3Q9UM47 2321 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 A0A0A0MQY5 61 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 CBY3A6NI87 242 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 C15orf62A8K5M9 175 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 INS-IGF2F8WCM5 200 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 I3L2K1 104 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 TGOLN2O43493 480 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 GNG7O60262 68 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 SCGB2A1O75556 95 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 BRI3O95415 125 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 PET100P0DJ07 73 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 ZP3P21754 424 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 MFAP4P55083 255 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 H2BFSP57053 126 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 SYNJ2BPP57105 145 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 RAB11AP62491 216 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 AKR1C1Q04828 323 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 FCN2Q15485 313 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 BSXQ3C1V8 233 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 C2orf83Q53S99 150 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 OR8G2PQ6IF36 304 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 ACOT7LQ6ZUV0 252 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 RNASEH2CQ8TDP1 164 aaKnown RBP4.91□□□□□ -1.62
VPS4B-205ENST00000591383 VN1R17PQ8TDU5 208 aa4.91□□□□□ -1.62
VPS4B-205ENST00000591383 SCARB1Q8WTV0 552 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms