RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 TMEM50AO95807 157 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 NPBWR1P48145 328 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 TNFRSF9Q07011 255 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 SMCO1Q147U7 214 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 C2orf83Q53S99 150 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 TRIQKQ629K1 86 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 DUSP18Q8NEJ0 188 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 SLC24A4Q8NFF2 622 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 OR4X1Q8NH49 305 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 RCHY1Q96PM5 261 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 TMPRSS5Q9H3S3 457 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 PLA2G2DQ9UNK4 145 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 CSMD3Q7Z407 3707 aa8.38□□□□□ -1.07
SMAD4-211ENST00000590499 PIGBOS1A0A0B4J2F0 54 aa8.37□□□□□ -1.07
SMAD4-211ENST00000590499 A0A1B0GU03 582 aa8.37□□□□□ -1.07
SMAD4-211ENST00000590499 CEBPZOSA8MTT3 80 aa8.37□□□□□ -1.07
SMAD4-211ENST00000590499 TSPAN4O14817 238 aa8.37□□□□□ -1.07
SMAD4-211ENST00000590499 CLN5O75503 358 aa8.37□□□□□ -1.07
SMAD4-211ENST00000590499 SCAF4O95104 1147 aaKnown RBP8.37□□□□□ -1.07
SMAD4-211ENST00000590499 NXPH3O95157 252 aa8.37□□□□□ -1.07
SMAD4-211ENST00000590499 IL7P13232 177 aa8.37□□□□□ -1.07
SMAD4-211ENST00000590499 OPRK1P41145 380 aa8.37□□□□□ -1.07
SMAD4-211ENST00000590499 UBE2MP61081 183 aaKnown RBP8.37□□□□□ -1.07
SMAD4-211ENST00000590499 HAGHQ16775 308 aa8.37□□□□□ -1.07
SMAD4-211ENST00000590499 TOMM20LQ6UXN7 152 aa8.37□□□□□ -1.07
SMAD4-211ENST00000590499 CENPSQ8N2Z9 138 aa8.37□□□□□ -1.07
SMAD4-211ENST00000590499 DEFB125Q8N687 156 aa8.37□□□□□ -1.07
SMAD4-211ENST00000590499 SPAG8Q99932 426 aaPredicted RBP8.37□□□□□ -1.07
SMAD4-211ENST00000590499 HEYLQ9NQ87 328 aaPredicted RBP8.37□□□□□ -1.07
SMAD4-211ENST00000590499 SMPXQ9UHP9 88 aa8.37□□□□□ -1.07
SMAD4-211ENST00000590499 SACSQ9NZJ4 4579 aa8.36□□□□□ -1.07
SMAD4-211ENST00000590499 IGHV7-4-1A0A0J9YVY3 117 aa8.36□□□□□ -1.07
SMAD4-211ENST00000590499 RBMY1BA6NDE4 496 aaKnown RBP8.36□□□□□ -1.07
SMAD4-211ENST00000590499 RBMY1EA6NEQ0 496 aaKnown RBP8.36□□□□□ -1.07
SMAD4-211ENST00000590499 OR11H12B2RN74 326 aa8.36□□□□□ -1.07
SMAD4-211ENST00000590499 CHEK1O14757 476 aa8.36□□□□□ -1.07
SMAD4-211ENST00000590499 IGKV1-17P01599 117 aa8.36□□□□□ -1.07
SMAD4-211ENST00000590499 RBMY1DP0C7P1 496 aaKnown RBP8.36□□□□□ -1.07
SMAD4-211ENST00000590499 SLC25A6P12236 298 aa8.36□□□□□ -1.07
SMAD4-211ENST00000590499 NPY1RP25929 384 aa8.36□□□□□ -1.07
SMAD4-211ENST00000590499 PRSS54Q6PEW0 395 aa8.36□□□□□ -1.07
SMAD4-211ENST00000590499 ZNF600Q6ZNG1 722 aa8.36□□□□□ -1.07
SMAD4-211ENST00000590499 RBPMS2Q6ZRY4 209 aaKnown RBP8.36□□□□□ -1.07
SMAD4-211ENST00000590499 SLC16A13Q7RTY0 426 aa8.36□□□□□ -1.07
SMAD4-211ENST00000590499 SYT8Q8NBV8 401 aa8.36□□□□□ -1.07
SMAD4-211ENST00000590499 RNASEH2CQ8TDP1 164 aaKnown RBP8.36□□□□□ -1.07
SMAD4-211ENST00000590499 DTD1Q8TEA8 209 aa8.36□□□□□ -1.07
SMAD4-211ENST00000590499 C7orf50Q9BRJ6 194 aaKnown RBP8.36□□□□□ -1.07
SMAD4-211ENST00000590499 RBKSQ9H477 322 aa8.36□□□□□ -1.07
SMAD4-211ENST00000590499 TUBA4BQ9H853 241 aa8.36□□□□□ -1.07
SMAD4-211ENST00000590499 DYNC2H1Q8NCM8 4307 aaKnown RBP8.35□□□□□ -1.07
SMAD4-211ENST00000590499 RPS10-NUDT3A0A1W2PQS6 291 aa8.35□□□□□ -1.07
SMAD4-211ENST00000590499 PLA2G10O15496 165 aa8.35□□□□□ -1.07
SMAD4-211ENST00000590499 YIF1AO95070 293 aa8.35□□□□□ -1.07
SMAD4-211ENST00000590499 INPP1P49441 399 aa8.35□□□□□ -1.07
SMAD4-211ENST00000590499 FAM90A2PQ658T7 463 aa8.35□□□□□ -1.07
SMAD4-211ENST00000590499 TMEM116Q8NCL8 245 aa8.35□□□□□ -1.07
SMAD4-211ENST00000590499 OR52B4Q8NGK2 314 aa8.35□□□□□ -1.07
SMAD4-211ENST00000590499 RNF2Q99496 336 aa8.35□□□□□ -1.07
SMAD4-211ENST00000590499 RHPN1-AS1Q9BWJ2 59 aa8.35□□□□□ -1.07
SMAD4-211ENST00000590499 HIPK2Q9H2X6 1198 aa8.35□□□□□ -1.07
SMAD4-211ENST00000590499 ZMAT4Q9H898 229 aa8.35□□□□□ -1.07
SMAD4-211ENST00000590499 SRD5A3Q9H8P0 318 aa8.35□□□□□ -1.07
SMAD4-211ENST00000590499 FLVCR2Q9UPI3 526 aa8.35□□□□□ -1.07
SMAD4-211ENST00000590499 TMED3Q9Y3Q3 217 aa8.35□□□□□ -1.07
SMAD4-211ENST00000590499 PUS1Q9Y606 427 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMAD4-211ENST00000590499 U3KQ87 197 aa8.35□□□□□ -1.07
SMAD4-211ENST00000590499 IGHV3-49A0A0A0MS15 119 aa8.34□□□□□ -1.07
SMAD4-211ENST00000590499 TRAV14DV4A0A0A6YYC5 116 aa8.34□□□□□ -1.07
SMAD4-211ENST00000590499 LINC00854A0A1B0GVQ3 168 aa8.34□□□□□ -1.07
SMAD4-211ENST00000590499 C9orf170A2RU37 121 aa8.34□□□□□ -1.07
SMAD4-211ENST00000590499 FAM90A26D6RGX4 464 aa8.34□□□□□ -1.07
SMAD4-211ENST00000590499 IGLC1P0CG04 106 aa8.34□□□□□ -1.07
SMAD4-211ENST00000590499 SLC25A4P12235 298 aa8.34□□□□□ -1.07
SMAD4-211ENST00000590499 ODF3L2Q3SX64 289 aa8.34□□□□□ -1.07
SMAD4-211ENST00000590499 LAMTOR1Q6IAA8 161 aa8.34□□□□□ -1.07
SMAD4-211ENST00000590499 LINC00299Q6ZSB3 139 aa8.34□□□□□ -1.07
SMAD4-211ENST00000590499 OR1S1Q8NH92 325 aa8.34□□□□□ -1.07
SMAD4-211ENST00000590499 SPATA25Q9BR10 227 aa8.34□□□□□ -1.07
SMAD4-211ENST00000590499 GINS3Q9BRX5 216 aa8.34□□□□□ -1.07
SMAD4-211ENST00000590499 VSIRQ9H7M9 311 aa8.34□□□□□ -1.07
SMAD4-211ENST00000590499 PLECQ15149 4684 aaKnown RBP8.33□□□□□ -1.08
SMAD4-211ENST00000590499 TRAV30A0A087WSZ9 112 aa8.33□□□□□ -1.08
SMAD4-211ENST00000590499 CENPXA8MT69 81 aa8.33□□□□□ -1.08
SMAD4-211ENST00000590499 IFNA10P01566 189 aa8.33□□□□□ -1.08
SMAD4-211ENST00000590499 APOHP02749 345 aaPredicted RBP8.33□□□□□ -1.08
SMAD4-211ENST00000590499 RND2P52198 227 aa8.33□□□□□ -1.08
SMAD4-211ENST00000590499 ATP5IP56385 69 aaPredicted RBP8.33□□□□□ -1.08
SMAD4-211ENST00000590499 DHRS2Q13268 280 aa8.33□□□□□ -1.08
SMAD4-211ENST00000590499 TIGITQ495A1 244 aa8.33□□□□□ -1.08
SMAD4-211ENST00000590499 GGNBP1Q5YKI7 109 aa8.33□□□□□ -1.08
SMAD4-211ENST00000590499 NOXA1Q86UR1 476 aa8.33□□□□□ -1.08
SMAD4-211ENST00000590499 LILRB2Q8N423 598 aa8.33□□□□□ -1.08
SMAD4-211ENST00000590499 OR1S2Q8NGQ3 325 aa8.33□□□□□ -1.08
SMAD4-211ENST00000590499 ST8SIA2Q92186 375 aa8.33□□□□□ -1.08
SMAD4-211ENST00000590499 FAM110AQ9BQ89 295 aa8.33□□□□□ -1.08
SMAD4-211ENST00000590499 RYR2Q92736 4967 aa8.33□□□□□ -1.08
SMAD4-211ENST00000590499 IGHV3OR16-13A0A075B7E8 117 aa8.32□□□□□ -1.08
SMAD4-211ENST00000590499 IGHV3-74A0A0B4J1X5 117 aa8.32□□□□□ -1.08
SMAD4-211ENST00000590499 OR4C46A6NHA9 309 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms